View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10799_low_5 (Length: 367)
Name: NF10799_low_5
Description: NF10799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10799_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 17 - 351
Target Start/End: Original strand, 7108801 - 7109135
Alignment:
| Q |
17 |
aattatcagagaatatgagtttaaaatgacctctatccaattacaaatgttttcattaaaaccaaaagctttcaaaatcttcaaaagaaattttcattcc |
116 |
Q |
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| T |
7108801 |
aattatcagacaatatgagtttaaaatgacctctatccaattccaaatgttttcattaaaaccaaaagctttcaaaatcttcaaaagaaattttcattcc |
7108900 |
T |
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| Q |
117 |
acagtgtcaaaagctttataaatgtctattttaagggcaagattacctccaaaagatctattatggagaagatcggttgcctctcaagtgaggttgatac |
216 |
Q |
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| T |
7108901 |
acagtgtcaaaagctttataaatgtctattttaagggcaagattacctccaaaagatctattatggcgaagatcgggtgcctctcaagtgaggttgatgc |
7109000 |
T |
|
| Q |
217 |
actctttgatttgtctttgttgaataaatcctctttgatgattagaaatgaggttaggcatgattctagctaacctttcagcaatcactttggttataat |
316 |
Q |
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|||||||||||||||| |||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7109001 |
actctttgatttgtctgtgttgaataaattctctttgctgcttagaaatgaggttaggcatgattctagctaacctttcagcaatcactttggttataat |
7109100 |
T |
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| Q |
317 |
tttaaacttgaagttatctaaagctataggcctat |
351 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
7109101 |
tttaaacttgaagttatctaaagctataggtctat |
7109135 |
T |
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