View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10799_low_9 (Length: 261)
Name: NF10799_low_9
Description: NF10799
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10799_low_9 |
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Alignment Details
Target: chr3 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 52315679 - 52315918
Alignment:
| Q |
1 |
tagaaaataatagaagtatttatttatggggaaaaagcgacagaaaacaaaggaactttcatcagtagcgctagctgaggatgctgctgcatcaacagaa |
100 |
Q |
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| T |
52315679 |
tagaaaataatagaagtatttatttatggggaaaaagcgacagaaaacaaaggaactttcatcagtagcgctagctgaggatgctgctgcatcaacagaa |
52315778 |
T |
|
| Q |
101 |
ggaggtgaaccagaagaagctcctcgtcggaagagaggaaggcctcgtaaggttgttgttgttacggaaactaaggaactaaaagaggaagaggatacag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52315779 |
ggaggtgaaccagaagaagctcctcgtcggaagagaggaaggcctcgtaaggttgttgttgttacggaaactaaggaactaaaagaggaagaggatacag |
52315878 |
T |
|
| Q |
201 |
taaactcaacaaagaaagatgaacaacaagaggaatcaac |
240 |
Q |
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|||||||||||||||||||||||||||||||||| ||||| |
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| T |
52315879 |
taaactcaacaaagaaagatgaacaacaagaggactcaac |
52315918 |
T |
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