View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10800_low_2 (Length: 274)
Name: NF10800_low_2
Description: NF10800
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10800_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 16 - 261
Target Start/End: Original strand, 9160315 - 9160564
Alignment:
| Q |
16 |
catttcataggttttgttaaactcaagtacatctttctactctgaaagacattcatagggatg---gtgagctgaatcatatgactctgcatatacatga |
112 |
Q |
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| T |
9160315 |
catttcataggttttgttaaactcaagtacatctttctactctgaaagacattcctagggatgatggtgagctgaatcatatgactctgcatataaatga |
9160414 |
T |
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| Q |
113 |
aaaaataataaaagtattgtgatttaagatgtttttt-cgcatttcataaactcatttaacttaaaacaagaattccatgtaacatgtggagatgtaaat |
211 |
Q |
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||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9160415 |
aaaaataataaaagtattgtgatttaagatgtttttttcacatttcataaactcatttaacttaaaacaagaattccatgtaacatgtggagatgtaaat |
9160514 |
T |
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| Q |
212 |
tctcaatagttgaaattagataatatttaaatcattttaaaagaagatct |
261 |
Q |
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| T |
9160515 |
tctcaatagttgaaattagataatatttaaatcattttaaaagaagatct |
9160564 |
T |
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