View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10801_low_14 (Length: 242)

Name: NF10801_low_14
Description: NF10801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10801_low_14
NF10801_low_14
[»] chr7 (2 HSPs)
chr7 (5-236)||(7969916-7970142)
chr7 (2-236)||(37576966-37577195)
[»] chr5 (11 HSPs)
chr5 (1-230)||(25469421-25469645)
chr5 (20-233)||(32739955-32740163)
chr5 (2-231)||(32767747-32767971)
chr5 (14-236)||(32762859-32763076)
chr5 (14-236)||(28474719-28474936)
chr5 (18-203)||(32651863-32652048)
chr5 (35-203)||(32858129-32858297)
chr5 (13-233)||(32656093-32656308)
chr5 (14-199)||(32662009-32662194)
chr5 (196-236)||(25477494-25477534)
chr5 (116-193)||(32710150-32710227)
[»] chr1 (2 HSPs)
chr1 (8-235)||(17591260-17591482)
chr1 (10-236)||(17583355-17583576)
[»] chr2 (2 HSPs)
chr2 (7-203)||(16756838-16757034)
chr2 (8-233)||(16752334-16752554)
[»] chr4 (1 HSPs)
chr4 (2-236)||(21524397-21524629)


Alignment Details
Target: chr7 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 5 - 236
Target Start/End: Complemental strand, 7970142 - 7969916
Alignment:
Q  5 aatactatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaa 104  Q
    |||||||||  ||||||||| || ||||| |||||||||||||| || |||||||||| |||  |||||||||||||||||| |||||||||| ||| |     
T  7970142 aatactatgagtttgggaaaagcagtcaatatttgctgcattggtcctaactcttctgggtccgagtatagttatgatatatcggctaagtctgagatat 7970043  T
Q  105 gtaagctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaact 204  Q
    | || ||| ||||||| |||||||||||||| ||||||| | |||| |||| ||||||| ||||||||||||| |||||||||||| ||||||||         
T  7970042 gcaaactgaaattacagtcttttgcgaagaacgtccaacagtttactttagcaactctttcatcagagttccttgtgattccatttcgttcttct----- 7969948  T
Q  205 gaacctctcaagatagaaatttgcataacccc 236  Q
    |||||||||||| |||| ||||||||||||||    
T  7969947 gaacctctcaagctagacatttgcataacccc 7969916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 37576966 - 37577195
Alignment:
Q  2 aataatactatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcaga 101  Q
    |||| |||||||||||| ||||| ||  |||| ||||| |||||| | ||||| |||||| |||   ||| | ||||||||||||||||||  |||||      
T  37576966 aatagtactatgctttttggaaatgcaatcaatatttgttgcattagtccaaagtcttctcagtacgagtgtggttatgatatattggctagatctcaag 37577065  T
Q  102 caagtaagctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctga 201  Q
    || | || | | |||| || || |||||||||||||| |||||| |||| |||  ||||||| ||| ||||||||| |||||||||||||||||||        
T  37577066 catgcaaaccgaaatttcagtcgtttgcgaagaatgtgcaacggtttactttatcaactctttcattagagttccttgtgattccatttggttctt---- 37577161  T
Q  202 actgaacctctcaagatagaaatttgcataacccc 236  Q
     ||||||||||| || |||||||||||||| ||||    
T  37577162 -ctgaacctctcgagctagaaatttgcatatcccc 37577195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 25469421 - 25469645
Alignment:
Q  1 aaataatactatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcag 100  Q
    ||||| ||||||| |||||||||||||||||||  ||||||||||||| ||||| ||||||||||| |||||||||||| |||| || |||   ||| ||    
T  25469421 aaatattactatgtttttgggaaacgcggtcaatgtttgctgcattggtccaaaatcttctgagtccaagtatagttataatattttagcttgttctaag 25469520  T
Q  101 acaagtaagctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctg 200  Q
    |  ||| ||||| |||| ||| |||||||||||||||||||||||||||| ||  |||||||| ||||| ||||||| |||||||||||||||| ||       
T  25469521 atgagtgagctgaaatttcacacttttgcgaagaatgtccaacgggttactttgaaaactctttcatcaaagttccttgtgattccatttggttttt--- 25469617  T
Q  201 aactgaacctctcaagatagaaatttgcat 230  Q
      ||||||||||| ||||||||||||||||    
T  25469618 --ctgaacctctcgagatagaaatttgcat 25469645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 233
Target Start/End: Original strand, 32739955 - 32740163
Alignment:
Q  20 ggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctggaattac 119  Q
    ||||| || ||||| ||||||||| |||| ||| || ||||||||||  |||||||||| ||||||||||||| |||||||| | |||| ||| ||||||    
T  32739955 ggaaatgctgtcaatatttgctgctttggtccagacgcttctgagtctgagtatagttacgatatattggctacgtctcagatatgtaaactgaaattac 32740054  T
Q  120 actcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaacctctcaagata 219  Q
    |||||||||| ||||||||||||| | |||| |||| || |||| ||||| ||||||| |||||||||||| ||||||     |||||||||||||| ||    
T  32740055 actcttttgccaagaatgtccaacagattactttagcaaatctttcatcaaagttccttgtgattccatttagttctt-----ctgaacctctcaagtta 32740149  T
Q  220 gaaatttgcataac 233  Q
    ||||||||||||||    
T  32740150 gaaatttgcataac 32740163  T

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Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 2 - 231
Target Start/End: Original strand, 32767747 - 32767971
Alignment:
Q  2 aataatactatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcaga 101  Q
    |||| |||||| ||||| ||||| || ||| | |||||||||||||| || ||||| ||||||||  |||||||||||||||||||||||| ||||||||    
T  32767747 aatagtactatacttttaggaaatgcagtctatatttgctgcattggtcctaactcctctgagtccgagtatagttatgatatattggctaggtctcaga 32767846  T
Q  102 caagtaagctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctga 201  Q
    || | || ||| ||||||| ||||||| ||| |||||||| | | |||| |||| |||||||||||||||| |||| ||||||||| |||| ||||||||    
T  32767847 catgcaaactgaaattacagtcttttgtgaaaaatgtccagcagtttactttagcaactcttccatcagagctccttgtgattccagttggctcttctga 32767946  T
Q  202 actgaacctctcaagatagaaatttgcata 231  Q
    ||     | |||||| ||||||||||||||    
T  32767947 ac-----cactcaagctagaaatttgcata 32767971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 32762859 - 32763076
Alignment:
Q  14 cttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctgg 113  Q
    ||||| ||||| || ||||| ||||||||| | || || ||||||||||||||  ||||||||||||||||||||||||  ||||||| | | || |||     
T  32762859 cttttaggaaatgcagtcaatatttgctgcctcggtcctaactcttctgagtctgagtatagttatgatatattggctagctctcagatatgcaaactga 32762958  T
Q  114 aattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaacctctc 213  Q
    ||||||| ||||||| |||||| |||||||| ||| | |||| ||||||| |||||||||| || ||||||||||||| |||||     | |||||||||    
T  32762959 aattacagtcttttgtgaagaacgtccaacgtgttgctttagcaactctttcatcagagtttcttgtgattccatttgcttctt-----ccgaacctctc 32763053  T
Q  214 aagatagaaatttgcataacccc 236  Q
    ||| |||| ||||||||||||||    
T  32763054 aagctagatatttgcataacccc 32763076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 28474719 - 28474936
Alignment:
Q  14 cttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctgg 113  Q
    ||||||||||| |  ||||| |||||||||||||| || ||||||||||||||  |||||||||||||||||||||||| |||||||| | | || |||     
T  28474719 cttttgggaaatggagtcaatatttgctgcattggtcctaactcttctgagtccgagtatagttatgatatattggctaggtctcagatatgcaaactga 28474818  T
Q  114 aattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaacctctc 213  Q
      ||||| ||||||| |||||| ||||||  |||| | |||| ||||| | |||||||||| || |||||||||||||||||||     | |||||||||    
T  28474819 ctttacagtcttttgtgaagaacgtccaagaggttgctttagcaactccttcatcagagttgcttgtgattccatttggttctt-----ccgaacctctc 28474913  T
Q  214 aagatagaaatttgcataacccc 236  Q
    ||| |||| ||||| ||||||||    
T  28474914 aagctagatatttgtataacccc 28474936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 203
Target Start/End: Complemental strand, 32652048 - 32651863
Alignment:
Q  18 tgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctggaatt 117  Q
    ||||||| || ||||| |||||| ||||||| ||||||| ||  |||||  | |||||||||||||||||||||| |||| |||   | || ||| ||||    
T  32652048 tgggaaatgcagtcaatatttgcggcattggtccaaacttttacgagtctgaatatagttatgatatattggctaggtctgagatgtgcaaactgaaatt 32651949  T
Q  118 acactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaac 203  Q
    ||| |||||||  ||| || ||||||| ||||| | || || |||| ||||||||||||| |||||||||||||||||||||||||    
T  32651948 acagtcttttggtaaggatttccaacgtgttacttcagcaaatctttcatcagagttccttgtgattccatttggttcttctgaac 32651863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 32858129 - 32858297
Alignment:
Q  35 atttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctggaattacactcttttgcgaaga 134  Q
    ||||| |||||||| || ||||||| ||| || |||||||||| |||||||| ||||| |||||||| | | ||  || ||||||| ||||||| |||      
T  32858129 atttgttgcattggtcctaactcttgtgaatccaagtatagttctgatatatcggctaggtctcagatatgcaaattgaaattacagtcttttgtgaaat 32858228  T
Q  135 atgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaac 203  Q
    | ||||||||| |||| |||| ||||||| ||||||||| ||| ||||||||||||||||||| |||||    
T  32858229 acgtccaacggtttactttagcaactctttcatcagagtgccttgtgattccatttggttcttttgaac 32858297  T

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Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 32656308 - 32656093
Alignment:
Q  13 gcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctg 112  Q
    |||||||||||| ||  |||| |||||||| ||||| ||||||||||  |||||  | | |||||| |||||||||| || ||||||||   | ||  ||    
T  32656308 gcttttgggaaatgctatcaatatttgctgtattggtccaaactctttcgagtctgaatgtagttacgatatattggttaggtctcagatgtgcaacttg 32656209  T
Q  113 gaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaacctct 212  Q
     ||||||| ||||| |||||||||||||||  ||||  ||||| ||||||| | || ||||| || |||||||||||||||||||      |||| ||||    
T  32656208 aaattacagtctttcgcgaagaatgtccaatcggttgtattagcaactctttcgtcggagttgcttgtgattccatttggttctt-----ttgaagctct 32656114  T
Q  213 caagatagaaatttgcataac 233  Q
    |||| ||||||||||||||||    
T  32656113 caagctagaaatttgcataac 32656093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 199
Target Start/End: Complemental strand, 32662194 - 32662009
Alignment:
Q  14 cttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaagctgg 113  Q
    ||||||||||| ||  |||| |||||||| ||||| ||||||||||  |||||  | ||||| ||| |||||||||||| ||||||||   | || |||     
T  32662194 cttttgggaaatgctatcaatatttgctgtattggtccaaactctttcgagtctgaatatagatattatatattggctaggtctcagatgtgcaaactga 32662095  T
Q  114 aattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttct 199  Q
    |||| || |||||||| ||| |||| ||||| ||| | || | ||||| | | |||||||||||  ||||||||||||||||||||    
T  32662094 aattgcagtcttttgcaaaggatgttcaacgtgttgcgttcgcaactccttcctcagagttccttttgattccatttggttcttct 32662009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 236
Target Start/End: Original strand, 25477494 - 25477534
Alignment:
Q  196 ttctgaactgaacctctcaagatagaaatttgcataacccc 236  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25477494 ttctgaactgaacctctcaagatagaaatttgcataacccc 25477534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 193
Target Start/End: Original strand, 32710150 - 32710227
Alignment:
Q  116 ttacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggt 193  Q
    ||||| |||||| |||||||||||||||| ||||  |||| |  |||| |||||  ||||||||||||||||||||||    
T  32710150 ttacagtcttttccgaagaatgtccaacgcgttagtttagcagatctttcatcaacgttcctcgtgattccatttggt 32710227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 8 - 235
Target Start/End: Original strand, 17591260 - 17591482
Alignment:
Q  8 actatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagta 107  Q
    |||| |||||||||||| || |||||  ||||||||||||| || |||||||||||||| || |||| ||||||||||||||||| ||||||||   | |    
T  17591260 actacgcttttgggaaatgcagtcaatctttgctgcattggtcctaactcttctgagtccaactataattatgatatattggctaggtctcagaattgca 17591359  T
Q  108 agctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaa 207  Q
      ||| ||||||| |||||||||||||| |||||||  ||||| |||| ||||||| |||||||||| || |||||||||||||||||||     |||||    
T  17591360 tactgaaattacagtcttttgcgaagaacgtccaacaagttactttagcaactctttcatcagagttgcttgtgattccatttggttctt-----ctgaa 17591454  T
Q  208 cctctcaagatagaaatttgcataaccc 235  Q
    ||||||||| |||| |||||||||||||    
T  17591455 cctctcaagctagatatttgcataaccc 17591482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 236
Target Start/End: Original strand, 17583355 - 17583576
Alignment:
Q  10 tatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagtaag 109  Q
    ||||||||||||||| || |||||  ||||||||||||| || ||||||||||||||  | |||||||||||||||||||||| |||||||| |   ||     
T  17583355 tatgcttttgggaaatgcagtcaatctttgctgcattggtcctaactcttctgagtccgactatagttatgatatattggctaggtctcagatatccaaa 17583454  T
Q  110 ctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaacc 209  Q
    ||| ||||||| ||||| | |||||| ||||||| |||| | |||| ||||||| |||||||||| || |||||||||||||||||||     |||||||    
T  17583455 ctgaaattacagtctttcgtgaagaacgtccaacaggttcctttagcaactctttcatcagagttgcttgtgattccatttggttctt-----ctgaacc 17583549  T
Q  210 tctcaagatagaaatttgcataacccc 236  Q
    ||||||| |||| ||||||||||||||    
T  17583550 tctcaagctagatatttgcataacccc 17583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 203
Target Start/End: Original strand, 16756838 - 16757034
Alignment:
Q  7 tactatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagt 106  Q
    |||||||||||||||||| || ||||| ||||| ||| |||| ||||   |||||| |||  |||||||||||||||||| ||||| |||||||| | |     
T  16756838 tactatgcttttgggaaatgcagtcaatatttgttgctttggtccaactgcttctgtgtccgagtatagttatgatatatcggctaggtctcagaaatgc 16756937  T
Q  107 aagctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaac 203  Q
    || ||| |||||||||| ||||| |||||| | || |  ||||| |||| ||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  16756938 aaactgaaattacactcgtttgcaaagaatttgcatcaagttactttagcaactctttcatcagagttccttgtgattccaattggttcttctgaac 16757034  T

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Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 233
Target Start/End: Original strand, 16752334 - 16752554
Alignment:
Q  8 actatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcagacaagta 107  Q
    |||| ||||||||| || || ||||| ||||||||| |||| |||||  |||| |||||  |||||||||||| |||   ||| | |||||||| | | |    
T  16752334 actacgcttttggggaatgcagtcaatatttgctgctttggtccaaatgcttccgagtccgagtatagttatggtatcaaggccaggtctcagagatgca 16752433  T
Q  108 agctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctgaactgaa 207  Q
    | ||| |||||||||||||||  | ||||||||||| |||||| |||| ||||||| || ||||||||||  ||||||||  ||||||||     |  ||    
T  16752434 aactgaaattacactcttttgtaacgaatgtccaacaggttactttaggaactctttcaccagagttccttatgattccaaatggttctt-----ccaaa 16752528  T
Q  208 cctctcaagatagaaatttgcataac 233  Q
    ||||||||| ||||||||||||||||    
T  16752529 cctctcaagctagaaatttgcataac 16752554  T

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Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 21524397 - 21524629
Alignment:
Q  2 aataatactatgcttttgggaaacgcggtcaacatttgctgcattggaccaaactcttctgagtcaaagtatagttatgatatattggctaagtctcaga 101  Q
    |||| |||||||  ||| ||||| || || || ||||| |||||||| |  ||||||| |||||| ||||||||||||||||||||||||| |||| |||    
T  21524397 aatagtactatgagtttaggaaatgcagttaatatttgttgcattggtcataactcttttgagtccaagtatagttatgatatattggctaggtctgaga 21524496  T
Q  102 caagtaagctggaattacactcttttgcgaagaatgtccaacgggttacattagaaactcttccatcagagttcctcgtgattccatttggttcttctga 201  Q
     | | ||  || ||||||| ||||||| |||  |  || ||||| |||| |||  ||||||| ||| ||||| ||| ||||||||||||||||||| |||    
T  21524497 tatgcaaattgaaattacagtcttttgtgaaatacttctaacggtttactttattaactctttcatgagagtgccttgtgattccatttggttcttttga 21524596  T
Q  202 actgaacctctcaagatagaaatttgcataacccc 236  Q
    ||   |||||  ||| |||| ||||||||||||||    
T  21524597 ac--cacctcataagctagatatttgcataacccc 21524629  T

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