View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10801_low_9 (Length: 275)
Name: NF10801_low_9
Description: NF10801
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10801_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 51224455 - 51224703
Alignment:
| Q |
19 |
aatagttccccatatctcaagcaagtctgcaataccataatgcttttctgtctcaaaaacatagttcaacaaaacatctgtcatcgatttcctcatcgca |
118 |
Q |
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| T |
51224455 |
aatagttccccatatctcaagcaagtctgcaataccataatgcttttctgtctcaaaaacatagttcaacaaaacatctgtcatcgatttcctcatcgca |
51224554 |
T |
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| Q |
119 |
gaacggtcgcaaacgaacttagaatatatcttgtggtatacatttttcaaactttcgcgttcccttggatcttcggattggaaaagcgataacagattaa |
218 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |
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| T |
51224555 |
gaacggtcgcaaacgaacttagaatatatcttgtggtatacatttttcaaactttcgcgttccctcggatcttcggattggaaaagcgttaacagattaa |
51224654 |
T |
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| Q |
219 |
ggaggaaagaatgatccatataatttctaagtattttggtgtctctgct |
267 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
51224655 |
ggaggaaagaatgatccatataatttctaagtattttggtgtctgtgct |
51224703 |
T |
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