View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10802_high_11 (Length: 238)
Name: NF10802_high_11
Description: NF10802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10802_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 13215020 - 13215233
Alignment:
| Q |
16 |
aattagatgtgagctagcactaggtggttcaaagattattcaaatgcaactaaaacaagttttgacatttccaagacgcagaacatatcagatttgaagc |
115 |
Q |
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| T |
13215020 |
aattagatgcgagctagcactaggtggttcaaagattattcaaatgcaactaaaacaagttttgacatttccaagacgcagaacatatcagatttgaagc |
13215119 |
T |
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| Q |
116 |
agtaacttacatgcacaaatcttccaaagacaataagactttataagtcatacatgacataagaaaaagatgtacctcatttgcaggctgatgattctgt |
215 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
13215120 |
agtaacttacatgcacaaatcttccaaagacagtaagactttataagtcatacatgacataagaaaaagatttacctcatttgcaggctgatgattctgg |
13215219 |
T |
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| Q |
216 |
tgccattttcatct |
229 |
Q |
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|||||||||||||| |
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| T |
13215220 |
tgccattttcatct |
13215233 |
T |
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