View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10802_high_12 (Length: 236)
Name: NF10802_high_12
Description: NF10802
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10802_high_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 14 - 236
Target Start/End: Complemental strand, 2044365 - 2044143
Alignment:
| Q |
14 |
attaattcatacctccatatggacccggagtaggacgtgaacgtcgagctgcgcgacccgattttcctacaaacacacaagtaatacaattgatcaacat |
113 |
Q |
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| T |
2044365 |
attaattcatacctccatatggacccggagtaggacgtgaacgtcgagctgcgcgacccgattttcctacaaacacacaagtaatacaattgatcaacat |
2044266 |
T |
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| Q |
114 |
tatataactagaaaataaaatcagagatgaacacattcttaatttattgagtgaaatcactatactattttattgttcagacaaatcaaaaacatagaaa |
213 |
Q |
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| T |
2044265 |
tatataactagaaaataaaatcagagatgaacacattcttaatttattgagtgaaatcactatactattttattgttcagacaaatcaaaaacatacaaa |
2044166 |
T |
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| Q |
214 |
gaatgcatgccttgatttgaatc |
236 |
Q |
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| T |
2044165 |
gaatgcatgccttgatttgaatc |
2044143 |
T |
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