View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10805_low_16 (Length: 246)
Name: NF10805_low_16
Description: NF10805
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10805_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 15 - 239
Target Start/End: Original strand, 52576623 - 52576847
Alignment:
| Q |
15 |
caaaatcttactattttgatcattgtttcaaggattaagatagaacattatttcttagaagatgttgttatcttacagaatctccaagatgaacttcttg |
114 |
Q |
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| T |
52576623 |
caaaatcttactattttgatcattgtttcaaggattaagagagaacattatttcttagaagatgttgttatcttacagaatctccaagatgaacttcttg |
52576722 |
T |
|
| Q |
115 |
ccaaattccaggggatatccaaatgggccaccaattatggctgcatcatccattgtaacctcgtacactttcgggctactttttctgtcaagtaacaaga |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52576723 |
ccaaattccaggggatatccaaatgggccaccaattatggctgcatcatccattgtaacctcgtacactttcgggctactttttctgtcaagtaacaaga |
52576822 |
T |
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| Q |
215 |
tgtaaaaaatattcagttcatctct |
239 |
Q |
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||||||||||||||||||||||||| |
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| T |
52576823 |
tgtaaaaaatattcagttcatctct |
52576847 |
T |
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