View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10806_high_3 (Length: 276)
Name: NF10806_high_3
Description: NF10806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10806_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 17 - 189
Target Start/End: Complemental strand, 30217453 - 30217281
Alignment:
| Q |
17 |
agagcaagatcaaaagtgatctcaaaaatctcaaaagaaggaaacaatgggcctatatacttaattaaaagcagtgaaagaaaagaacacaaacaatatg |
116 |
Q |
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| T |
30217453 |
agagcaagatcaaaagtgatctcaaaaatctcaaaagaaggaaacaatgggcctatatacttaattaaaagcagtgaaagaaaagaacacaaacaatatg |
30217354 |
T |
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| Q |
117 |
ggaggggcaaggaatgaatgaatgaccaaagtactactatatgctttgctttatcacacacacaaattcgaat |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30217353 |
ggaggggcaaggaatgaatgaatgaccaaagtactactatatgctttgctttatcacacacacaaattcgaat |
30217281 |
T |
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