View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10806_low_7 (Length: 250)
Name: NF10806_low_7
Description: NF10806
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10806_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 42728005 - 42727776
Alignment:
| Q |
1 |
ttataaaattatcaatcaaattaaaacttgtattgagtagataaacttttggtggagcaacttaatctctactctgaatatggaaaatgtgaactatata |
100 |
Q |
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| T |
42728005 |
ttataaaattatcaatcaaattaaaacttgtattgagtagatcaacttttggtggagcaacttaatctctactctgaatatggaaaatgtgaactatata |
42727906 |
T |
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| Q |
101 |
ttatggagnnnnnnnntcatatatcatatgttaaagataatgtacaatttgtgctttttcaacaaagaataatatgtgcttctatatattgttattgttc |
200 |
Q |
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| T |
42727905 |
ttatgga-aaaaaaaatcatatatcatatgttaaagataatgtacaatttgtgctttttcaacaaagaataatatgtgcttctatatattgttattgttc |
42727807 |
T |
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| Q |
201 |
aataattagtttgcccttttatttattacct |
231 |
Q |
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||||||||||| ||||||||||||||||||| |
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| T |
42727806 |
aataattagttagcccttttatttattacct |
42727776 |
T |
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