View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10808_high_1 (Length: 239)
Name: NF10808_high_1
Description: NF10808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10808_high_1 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 174; Significance: 9e-94; HSPs: 12)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 2 - 222
Target Start/End: Complemental strand, 25469433 - 25469213
Alignment:
| Q |
2 |
catagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatca |
100 |
Q |
| |
|
||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |
|
|
| T |
25469433 |
catagtaatatttttgaggataaataattggccatcgtttttctcttgaagaacaacggtttcatcattagaattcaaggagacaatgaaggagtgatca |
25469334 |
T |
 |
| Q |
101 |
taagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaa |
200 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| || |
|
|
| T |
25469333 |
taagaaaatttattttgagaatccccgtgtttttggctaaaatggctggacagcacttctgatgatgcaacgaagtcacaacctg-aaaaggggcagtaa |
25469235 |
T |
 |
| Q |
201 |
catggctcatagatacattctt |
222 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25469234 |
catggctcatagatacattctt |
25469213 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 28474699 - 28474538
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| |||||| || ||| |||||||||||||| ||||||||||||||| | ||| |||| | ||||||||||| |||||||||||||| || ||| |
|
|
| T |
28474699 |
ataaatagtttgccctcagtttcctcttgaagaacaatggtttcatcattagacttcaaagagacattgaaggagtgaccataagaaaatttgattcgag |
28474600 |
T |
 |
| Q |
120 |
aatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaa |
181 |
Q |
| |
|
||||||| ||||| ||||| |||||| |||||| ||||| |||||||||| | ||||||||| |
|
|
| T |
28474599 |
aatccccatgtttatggctgaaatggttggacaacacttctgatgatgcagcaaagtcacaa |
28474538 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 188
Target Start/End: Complemental strand, 32762831 - 32762671
Alignment:
| Q |
29 |
tttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgagaatccccg |
127 |
Q |
| |
|
||||||||| |||| ||||||||| |||| ||||||||||||||| | |||||||| |||||||||| | |||||||||||||| | |||||||||| | |
|
|
| T |
32762831 |
tttgccatcattttcctcttgaaggacaatggtttcatcattagacttcaaggagacaatgaaggagccaccataagaaaatttgatgtgagaatccctg |
32762732 |
T |
 |
| Q |
128 |
tgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaa |
188 |
Q |
| |
|
||||| ||||| | |||| |||||| ||||| |||||||||| | ||||||||| |||||| |
|
|
| T |
32762731 |
tgtttatggctgacatggttggacaacacttctgatgatgcagcaaagtcacaacctgaaa |
32762671 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 44 - 224
Target Start/End: Complemental strand, 32710005 - 32709825
Alignment:
| Q |
44 |
ctcttgaagaacaacggtttcatcattagaatc-aaggagaaaatgaaggagtgatcataagaaaatttgttttgagaatccccgtgtttttggctaaaa |
142 |
Q |
| |
|
|||||||||||||| || ||| |||||| | | ||||||| ||||||||||||| ||||||||||| || ||||| ||||| |||||| ||||| ||| |
|
|
| T |
32710005 |
ctcttgaagaacaatggcttcgtcattaaactttaaggagacaatgaaggagtgaccataagaaaatgtgctttgaaaatccttgtgtttatggctgaaa |
32709906 |
T |
 |
| Q |
143 |
tggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaacatggctcatagatacattcttct |
224 |
Q |
| |
|
|| |||||| ||||| |||||| ||||| ||||||||| ||| ||| ||| ||| |||||||| |||| |||||||||||| |
|
|
| T |
32709905 |
tgattggacaacacttctgatgaggcaacaaagtcacaacctg-aaaggggacagtaacatggcacatacatacattcttct |
32709825 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 220
Target Start/End: Complemental strand, 32739946 - 32739730
Alignment:
| Q |
4 |
tagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattaga-atcaaggagaaaatgaaggagtgatcata |
102 |
Q |
| |
|
||||| |||| || || ||||||| |||| |||| |||| |||| ||||||||| ||||||||||||||| ||||||||| || |||||| ||| ||| |
|
|
| T |
32739946 |
tagtactattattgagaataaatagtttgtcatcattttcctctcgaagaacaatggtttcatcattagacttcaaggagataacgaaggattgaccatt |
32739847 |
T |
 |
| Q |
103 |
agaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaaca |
202 |
Q |
| |
|
|||||||||| |||| |||||||| ||||| |||| ||||| | |||| ||||| ||||||| |||| |||||||| ||| ||||||| ||| |||| |
|
|
| T |
32739846 |
agaaaatttgatttgcgaatccccatgtttatggcagaaatgcatagacaacacttctgatgattcaacaaagtcacatcctg-aaaagggacagtaaca |
32739748 |
T |
 |
| Q |
203 |
tggctcatagatacattc |
220 |
Q |
| |
|
||||| || ||| ||||| |
|
|
| T |
32739747 |
tggcttatggatgcattc |
32739730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 32558107 - 32558330
Alignment:
| Q |
1 |
gcatagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatc |
99 |
Q |
| |
|
|||||||| |||| || || |||||| ||| ||||| |||| ||||||||||||| | | |||||||||||||| ||| |||| | ||||||||||| | |
|
|
| T |
32558107 |
gcatagtactattattgagagtaaatagtttcccatcattttcctcttgaagaacagcagcttcatcattagaattcaacgagacagtgaaggagtgacc |
32558206 |
T |
 |
| Q |
100 |
ataagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcagga |
199 |
Q |
| |
|
||||||||||| | || |||| ||||||||||| ||| | |||||| |||||| ||||| | |||| ||||| || |||||| || || ||| ||| | |
|
|
| T |
32558207 |
ataagaaaattcgattagagagtccccgtgtttatggttgaaatggttggacaacacttctaatgaggcaacaaaatcacaacct-ttaacgggacagta |
32558305 |
T |
 |
| Q |
200 |
acatggctcatagatacattcttct |
224 |
Q |
| |
|
||||||| ||||||| ||||||||| |
|
|
| T |
32558306 |
acatggcacatagatgcattcttct |
32558330 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 224
Target Start/End: Original strand, 32662214 - 32662417
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaatcaagg-agaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| |||||||| ||| |||||||| ||||| ||||||||||||||| | | | ||| ||| ||||||||| |||||||||||||| | |||| |
|
|
| T |
32662214 |
ataaatagtttgccataagtttcctcttgaaaaacaatggtttcatcattagacttgatgtagacaattaaggagtgaccataagaaaatttgatatgag |
32662313 |
T |
 |
| Q |
120 |
aatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaacatggctcatagatacatt |
219 |
Q |
| |
|
||||||||||||| | ||| ||||| | |||| ||||| |||||||||||| |||||||| ||||| | |||||| |||||||| ||| ||| |||| |
|
|
| T |
32662314 |
aatccccgtgtttatcgctgaaatgcttagacaacacttctgatgatgcaacaaagtcacagcttgaaaca-gggcagcaacatggcacatggatgcatt |
32662412 |
T |
 |
| Q |
220 |
cttct |
224 |
Q |
| |
|
||||| |
|
|
| T |
32662413 |
cttct |
32662417 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 32767757 - 32767557
Alignment:
| Q |
3 |
atagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaatc-aaggagaaaatgaaggagtgatcat |
101 |
Q |
| |
|
|||||| |||| || || ||||||| ||||||||| |||| ||| |||||||||| || || |||||| || | ||||||| ||||||||||||| ||| |
|
|
| T |
32767757 |
atagtactattattgagaataaatagtttgccatcattttcctcctgaagaacaatggcttgatcattggactttaaggagacaatgaaggagtgaccat |
32767658 |
T |
 |
| Q |
102 |
aagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaac |
201 |
Q |
| |
|
|| ||||||| ||||||||| || ||||||| |||| |||||| |||||| ||||| ||||| |||| | ||| ||||| || |||| ||||||| ||| |
|
|
| T |
32767657 |
aattaaatttgatttgagaattccggtgttttcggctgaaatggttggacaacacttctgatgttgcagcaaagccacaacct-aaaatggggcagtaac |
32767559 |
T |
 |
| Q |
202 |
at |
203 |
Q |
| |
|
|| |
|
|
| T |
32767558 |
at |
32767557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 21 - 132
Target Start/End: Complemental strand, 32858088 - 32857976
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| ||||||||| |||| || ||||||||||| ||||||| | ||||| | |||||||| ||||||||||||| |||| ||||||| | |||||| |
|
|
| T |
32858088 |
ataaatagtttgccatcattttccttttgaagaacaatggtttcaactttagacttcaaggagacaatgaaggagtgaccatacgaaaattggatttgag |
32857989 |
T |
 |
| Q |
120 |
aatccccgtgttt |
132 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
32857988 |
aatccctgtgttt |
32857976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 32656327 - 32656488
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| |||||||| ||| |||||||| ||||| ||||||||| ||||| | |||||||| | ||||||||| | |||||||||||||| |||||| |
|
|
| T |
32656327 |
ataaatagtttgccataactttcctcttgaaaaacaatggtttcatccttagacttcaaggagacattgaaggagtcaccataagaaaatttgatttgag |
32656426 |
T |
 |
| Q |
120 |
aatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaa |
181 |
Q |
| |
|
||||| |||||| | ||| ||||| | |||| ||||| ||||||||||| ||| ||||| |
|
|
| T |
32656427 |
aatccttgtgtttatcgctgaaatgcttagacaacacttcggatgatgcaacaaagccacaa |
32656488 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 222
Target Start/End: Original strand, 32652095 - 32652273
Alignment:
| Q |
44 |
ctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgagaatccccgtgtttttggctaaaa |
142 |
Q |
| |
|
|||||||| ||||| ||||| ||| ||||| | |||||||| ||||||||| ||| ||||| |||||||| |||||| ||||| ||||| | ||| ||| |
|
|
| T |
32652095 |
ctcttgaaaaacaatggtttgatcgttagacttcaaggagacaatgaaggaatgaccataaaaaaatttgatttgagtatccctttgtttattgctgaaa |
32652194 |
T |
 |
| Q |
143 |
tggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaacatggctcatagatacattctt |
222 |
Q |
| |
|
|| | ||||||||| |||||||||||| |||| |||| || || | |||||| |||||||| ||| ||| ||||||| |
|
|
| T |
32652195 |
tgcttatacagcacttctgatgatgcaacaaagtgacaacttggaaca-gggcagtaacatggcgcatggatgcattctt |
32652273 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 212
Target Start/End: Complemental strand, 32857962 - 32857909
Alignment:
| Q |
158 |
tttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaacatggctcatag |
212 |
Q |
| |
|
|||||||||||||| ||||||||| ||| ||| ||||||| |||||||||||||| |
|
|
| T |
32857962 |
tttgatgatgcaacaaagtcacaacctg-aaagggggcagtaacatggctcatag |
32857909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 2 - 224
Target Start/End: Original strand, 7970134 - 7970356
Alignment:
| Q |
2 |
catagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattaga-atcaaggagaaaatgaaggagtgatca |
100 |
Q |
| |
|
||||||||| || ||||| ||||||| ||| || || |||| |||||||||||||| ||||||| ||||||| |||||||||| ||||||||||||| || |
|
|
| T |
7970134 |
catagtattgttatttagaataaatagttttccgtcattttcctcttgaagaacaatggtttcaccattagacatcaaggagacaatgaaggagtgacca |
7970233 |
T |
 |
| Q |
101 |
taagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaa |
200 |
Q |
| |
|
|||||||||| | ||||||||||||| ||||| ||||| |||||| |||||| ||||| |||||| ||||| ||||||||| ||| ||| ||| ||| || |
|
|
| T |
7970234 |
taagaaaattcgatttgagaatccccatgtttatggctgaaatggttggacaacacttctgatgacgcaacaaagtcacaacctg-aaaggggacagtaa |
7970332 |
T |
 |
| Q |
201 |
catggctcatagatacattcttct |
224 |
Q |
| |
|
||||| ||||||| ||||||||| |
|
|
| T |
7970333 |
catggtacatagatgcattcttct |
7970356 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 185
Target Start/End: Complemental strand, 37576978 - 37576793
Alignment:
| Q |
1 |
gcatagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatc |
99 |
Q |
| |
|
|||||||| |||| || || ||||||| ||||||| | || |||||||||||||||| |||||||||||||| | |||||||| ||| | ||| || | |
|
|
| T |
37576978 |
gcatagtactattattgagaataaatagtttgccaacattattctcttgaagaacaatagtttcatcattagacttcaaggagacaataacggacagacc |
37576879 |
T |
 |
| Q |
100 |
ataagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctg |
185 |
Q |
| |
|
||||||||| ||| | ||||||||||||||||| ||||| ||||| | |||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
37576878 |
ataagaaaacttggtctgagaatccccgtgtttatggctgaaatgcttagacaacacttctgatgatgcaacaaagtcacaatctg |
37576793 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 2 - 212
Target Start/End: Complemental strand, 21524408 - 21524198
Alignment:
| Q |
2 |
catagtattattttttaggataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatca |
100 |
Q |
| |
|
||||||| |||| || || ||||||| ||||||||| |||| |||||||||||||| ||||||| | ||||| | |||||||| |||||||||||| || |
|
|
| T |
21524408 |
catagtactattattgagaataaatagtttgccatcattttcctcttgaagaacaatggtttcaactttagacttcaaggagacaatgaaggagtggcca |
21524309 |
T |
 |
| Q |
101 |
taagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcaggaa |
200 |
Q |
| |
|
|| ||||||||| |||||||||||| |||||| ||| |||||| | |||| ||||| |||||||||||| ||||||||| ||| ||| ||||||| || |
|
|
| T |
21524308 |
tacgaaaatttgatttgagaatccctgtgtttaaagctgaaatggtttgacaacacttctgatgatgcaacaaagtcacaacctg-aaagggggcagtaa |
21524210 |
T |
 |
| Q |
201 |
catggctcatag |
212 |
Q |
| |
|
|||||||||||| |
|
|
| T |
21524209 |
catggctcatag |
21524198 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 17583339 - 17583179
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| ||| ||||| |||| |||||||||||||| ||||||||||||||| | || ||||| | ||||||| ||| |||||||||||||| |||||| |
|
|
| T |
17583339 |
ataaatagtttaccatcattttcctcttgaagaacaatggtttcatcattagacttcatggagacagtgaaggactgaccataagaaaatttgatttgag |
17583240 |
T |
 |
| Q |
120 |
aatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcaca |
180 |
Q |
| |
|
|||| || ||||| ||||| || ||| |||||| || || ||| |||||| | |||||||| |
|
|
| T |
17583239 |
aatcaccatgtttatggctgaagtggttggacaacaattctgacgatgcagcaaagtcaca |
17583179 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 17591246 - 17591086
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| ||| ||||| |||| |||||||||||||| ||||||||||||| | |||||||| | ||||||||| | |||||||||||||| || || |
|
|
| T |
17591246 |
ataaatagtttaccatcattttcctcttgaagaacaataatttcatcattagacttcaaggagacagtgaaggagtaaccataagaaaatttgattatag |
17591147 |
T |
 |
| Q |
120 |
aatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcaca |
180 |
Q |
| |
|
||||||| ||||| || || |||||| |||||| ||||| |||||||||| | |||||||| |
|
|
| T |
17591146 |
aatccccatgtttatgcctgaaatggttggacaacacttctgatgatgcagcaaagtcaca |
17591086 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 188
Target Start/End: Complemental strand, 16752314 - 16752146
Alignment:
| Q |
21 |
ataaataatttgccatcgtttttctcttgaagaacaacggtttcatcattagaat-caaggagaaaatgaaggagtgatcataagaaaatttgttttgag |
119 |
Q |
| |
|
||||||| ||||||||| | |||||||||||||| || | ||||||| ||| | |||||||| |||||| || ||| |||||||||||||| |||||| |
|
|
| T |
16752314 |
ataaatagtttgccatcatatttctcttgaagaataattgcatcatcatcagacttcaaggagacaatgaaagattgaccataagaaaatttgatttgag |
16752215 |
T |
 |
| Q |
120 |
aatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaa |
188 |
Q |
| |
|
||||| ||||||| | ||| |||||| |||||| ||| | |||||| ||||| || |||||| |||||| |
|
|
| T |
16752214 |
aatcctcgtgtttattgctgaaatggttggacaacacctctgatgaggcaacaaaatcacaacctgaaa |
16752146 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 224
Target Start/End: Complemental strand, 16756716 - 16756592
Alignment:
| Q |
99 |
cataagaaaatttgttttgagaatccccgtgtttttggctaaaatggctggacagcacttttgatgatgcaacgaagtcacaatctgaaaaaggggcagg |
198 |
Q |
| |
|
||||| |||| ||| ||||||||||| ||||||| ||||| |||||| ||||| ||| | |||||| ||||| ||||||||| ||| ||| |||||| |
|
|
| T |
16756716 |
cataataaaaattgatttgagaatcctcgtgtttatggctgaaatggtcggacaacacctctgatgaagcaacaaagtcacaacctg-aaagggggcaat |
16756618 |
T |
 |
| Q |
199 |
aacatggctcatagatacattcttct |
224 |
Q |
| |
|
|||||||| ||||||| ||||||||| |
|
|
| T |
16756617 |
aacatggcacatagatgcattcttct |
16756592 |
T |
 |
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