View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10809_4 (Length: 429)
Name: NF10809_4
Description: NF10809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10809_4 |
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Alignment Details
Target: chr2 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 12 - 410
Target Start/End: Complemental strand, 38569893 - 38569495
Alignment:
| Q |
12 |
aatattcttatatgagtgcaagttgtagcaaattgatgcttatgtgctattacgccccctcaagatggagtcacagttggtgaggccattcttgtctctc |
111 |
Q |
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| T |
38569893 |
aatattcttatatgagtgcaagctgtagcaaattgatgcttatgtgctattacgccccctcaagatggagtcccagttggtgaggccattcttgtctctc |
38569794 |
T |
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| Q |
112 |
aagtaaatgaacctgggtttggacaaagactttatgagaatgtctgcaggttgatctttggtagaaatgtgagacatacagagttgacccaattgaacaa |
211 |
Q |
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| T |
38569793 |
aagtaaatgaacctgggtttggacaaagactttatgagaatgtctgcaggttgatctttggtagaaatgtgagacatacagagttgacccaattgaacaa |
38569694 |
T |
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| Q |
212 |
gttgacgtacataatggtagtcaagtgtgatatgcttcatttgagagtgaaaaactagattagagcataagtaggtgctctgatgttgtcacagaacaga |
311 |
Q |
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| T |
38569693 |
gttgacgtacataatggtagtcaagtgcgatatgcttcattcgagagtgaaaaactggattagagcataagtaggtgctctgatgttgtcacagaacaga |
38569594 |
T |
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| Q |
312 |
tgaggagctggtgttttgacatgtaatccactgagaaggtttgtcaaccacatgacctctactgtagcatttgctactgaacgatattcagcttccggt |
410 |
Q |
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| T |
38569593 |
tgaggagctggtgttttgacatgtaatccactgagaaggtttgtcaaccacatgacctctgctgcagcatttgctactgaatgatattcagcttccggt |
38569495 |
T |
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