View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10809_6 (Length: 401)

Name: NF10809_6
Description: NF10809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10809_6
NF10809_6
[»] chr5 (31 HSPs)
chr5 (177-272)||(1671630-1671725)
chr5 (177-272)||(7287077-7287172)
chr5 (177-272)||(33037608-33037703)
chr5 (182-272)||(18258681-18258771)
chr5 (177-272)||(26791132-26791227)
chr5 (177-272)||(28467341-28467436)
chr5 (177-272)||(28306020-28306115)
chr5 (177-272)||(36739036-36739131)
chr5 (177-271)||(1764312-1764406)
chr5 (182-272)||(41321348-41321438)
chr5 (182-271)||(13168615-13168704)
chr5 (177-272)||(8686979-8687074)
chr5 (177-272)||(14051203-14051298)
chr5 (177-272)||(14923161-14923256)
chr5 (177-272)||(15479557-15479652)
chr5 (186-272)||(17626083-17626169)
chr5 (177-269)||(2972412-2972504)
chr5 (177-272)||(1274446-1274540)
chr5 (177-272)||(5168271-5168366)
chr5 (177-264)||(7076464-7076551)
chr5 (177-272)||(35634723-35634819)
chr5 (189-271)||(42175021-42175101)
chr5 (199-272)||(3565194-3565267)
chr5 (187-272)||(7552855-7552940)
chr5 (177-233)||(35646471-35646527)
chr5 (182-269)||(13309976-13310063)
chr5 (177-272)||(22972205-22972300)
chr5 (177-272)||(18660847-18660941)
chr5 (177-272)||(39591768-39591863)
chr5 (177-272)||(39592160-39592255)
chr5 (177-213)||(19521950-19521986)
[»] chr1 (50 HSPs)
chr1 (177-272)||(649857-649952)
chr1 (177-272)||(33100896-33100991)
chr1 (185-272)||(26469455-26469542)
chr1 (177-272)||(27464945-27465040)
chr1 (177-268)||(35369788-35369879)
chr1 (177-266)||(3851246-3851335)
chr1 (177-272)||(37274921-37275016)
chr1 (177-272)||(48470727-48470822)
chr1 (177-272)||(19055647-19055742)
chr1 (177-272)||(23645499-23645594)
chr1 (177-272)||(31088269-31088364)
chr1 (177-272)||(45121369-45121463)
chr1 (177-272)||(44914459-44914555)
chr1 (177-272)||(3981914-3982009)
chr1 (177-272)||(8350087-8350181)
chr1 (181-272)||(21401490-21401581)
chr1 (177-266)||(50932392-50932481)
chr1 (177-269)||(45333799-45333891)
chr1 (177-272)||(15469945-15470039)
chr1 (177-272)||(50726136-50726231)
chr1 (186-272)||(46907292-46907378)
chr1 (177-272)||(30735181-30735276)
chr1 (177-272)||(44519039-44519134)
chr1 (182-268)||(40861154-40861240)
chr1 (187-272)||(37619642-37619727)
chr1 (177-269)||(43775294-43775386)
chr1 (177-272)||(52576189-52576285)
chr1 (177-272)||(37685417-37685512)
chr1 (177-272)||(37700006-37700101)
chr1 (187-272)||(2571733-2571819)
chr1 (182-242)||(4776849-4776909)
chr1 (181-272)||(51718518-51718605)
chr1 (177-246)||(8828035-8828104)
chr1 (177-233)||(12657310-12657367)
chr1 (177-233)||(6693245-6693301)
chr1 (177-272)||(9566848-9566943)
chr1 (177-272)||(15082939-15083033)
chr1 (177-272)||(19947632-19947727)
chr1 (177-272)||(45640390-45640484)
chr1 (177-247)||(10627723-10627793)
chr1 (177-272)||(2269460-2269555)
chr1 (177-272)||(18434883-18434978)
chr1 (177-272)||(31827039-31827134)
chr1 (177-272)||(50149034-50149129)
chr1 (187-220)||(37985326-37985359)
chr1 (177-242)||(48261228-48261293)
chr1 (177-229)||(3159464-3159516)
chr1 (177-213)||(25509126-25509162)
chr1 (236-272)||(41677224-41677260)
chr1 (177-233)||(41677251-41677307)
[»] chr3 (50 HSPs)
chr3 (177-272)||(32924169-32924264)
chr3 (177-272)||(19149078-19149173)
chr3 (177-272)||(27541390-27541485)
chr3 (177-272)||(42356972-42357067)
chr3 (177-272)||(46623995-46624090)
chr3 (177-272)||(52939739-52939834)
chr3 (177-271)||(35597250-35597344)
chr3 (177-269)||(42358529-42358621)
chr3 (177-272)||(16969454-16969549)
chr3 (177-272)||(33939326-33939421)
chr3 (177-272)||(36670902-36670997)
chr3 (177-272)||(38926716-38926811)
chr3 (177-272)||(41309205-41309300)
chr3 (177-272)||(52254026-52254121)
chr3 (178-272)||(47472418-47472512)
chr3 (177-272)||(52326107-52326202)
chr3 (177-272)||(288814-288909)
chr3 (177-272)||(37056945-37057040)
chr3 (185-272)||(44413283-44413370)
chr3 (177-271)||(24256660-24256754)
chr3 (182-272)||(37302639-37302729)
chr3 (182-272)||(44856046-44856136)
chr3 (195-272)||(13735836-13735913)
chr3 (187-272)||(44383287-44383372)
chr3 (177-272)||(5114166-5114261)
chr3 (177-268)||(5244317-5244408)
chr3 (177-272)||(26014900-26014995)
chr3 (185-272)||(44813232-44813319)
chr3 (186-272)||(21217609-21217695)
chr3 (182-272)||(55151605-55151695)
chr3 (186-271)||(23592555-23592640)
chr3 (177-269)||(8847198-8847289)
chr3 (177-272)||(7934063-7934157)
chr3 (177-248)||(20547902-20547973)
chr3 (177-272)||(31157565-31157660)
chr3 (177-272)||(13348022-13348117)
chr3 (177-272)||(37503635-37503730)
chr3 (177-233)||(41505579-41505635)
chr3 (177-272)||(35376969-35377064)
chr3 (177-271)||(35201323-35201417)
chr3 (199-271)||(23600703-23600775)
chr3 (177-269)||(7668079-7668170)
chr3 (177-244)||(45711355-45711422)
chr3 (178-272)||(14226593-14226687)
chr3 (202-272)||(44445407-44445477)
chr3 (177-233)||(44413849-44413905)
chr3 (177-220)||(45000151-45000194)
chr3 (177-272)||(51982187-51982282)
chr3 (177-222)||(1795983-1796028)
chr3 (177-213)||(49087054-49087090)
[»] chr6 (24 HSPs)
chr6 (182-272)||(33430250-33430340)
chr6 (177-272)||(552881-552976)
chr6 (177-272)||(32316816-32316911)
chr6 (177-272)||(14818020-14818115)
chr6 (177-272)||(15974696-15974791)
chr6 (177-272)||(31077882-31077977)
chr6 (182-272)||(1156813-1156903)
chr6 (177-267)||(18737460-18737550)
chr6 (177-272)||(13689882-13689977)
chr6 (186-272)||(16199547-16199633)
chr6 (177-272)||(5694039-5694134)
chr6 (177-272)||(26595437-26595532)
chr6 (177-272)||(34047475-34047570)
chr6 (177-233)||(8098524-8098580)
chr6 (177-272)||(17551267-17551361)
chr6 (177-272)||(22079451-22079546)
chr6 (178-272)||(30457594-30457688)
chr6 (177-233)||(5080494-5080550)
chr6 (187-239)||(11014911-11014963)
chr6 (177-272)||(4820455-4820550)
chr6 (177-272)||(33603168-33603263)
chr6 (193-243)||(5570255-5570305)
chr6 (188-269)||(30423443-30423524)
chr6 (199-271)||(11612298-11612370)
[»] chr4 (46 HSPs)
chr4 (182-272)||(43175077-43175167)
chr4 (177-272)||(26732313-26732408)
chr4 (177-272)||(39440572-39440667)
chr4 (182-272)||(51986135-51986225)
chr4 (177-272)||(23369220-23369315)
chr4 (177-272)||(26724860-26724955)
chr4 (177-272)||(44539822-44539917)
chr4 (177-272)||(53801647-53801742)
chr4 (177-269)||(24575742-24575834)
chr4 (177-272)||(26492095-26492190)
chr4 (177-272)||(37297137-37297231)
chr4 (177-272)||(27965075-27965168)
chr4 (177-272)||(31641453-31641548)
chr4 (182-272)||(29175318-29175408)
chr4 (177-269)||(10250406-10250498)
chr4 (177-269)||(11068776-11068868)
chr4 (177-268)||(27050978-27051069)
chr4 (177-272)||(36177994-36178089)
chr4 (177-264)||(38134441-38134528)
chr4 (177-272)||(42853665-42853760)
chr4 (186-272)||(38382418-38382504)
chr4 (182-272)||(46213063-46213153)
chr4 (186-272)||(47181938-47182024)
chr4 (186-272)||(48402085-48402171)
chr4 (177-272)||(15175634-15175729)
chr4 (177-244)||(40348882-40348949)
chr4 (182-272)||(38376378-38376468)
chr4 (177-233)||(29531533-29531589)
chr4 (188-272)||(56363933-56364017)
chr4 (177-272)||(5622546-5622641)
chr4 (179-269)||(19473847-19473937)
chr4 (186-272)||(34616658-34616744)
chr4 (182-256)||(39478530-39478604)
chr4 (203-266)||(45083086-45083149)
chr4 (177-233)||(2268434-2268490)
chr4 (177-241)||(31995834-31995898)
chr4 (177-268)||(37997342-37997433)
chr4 (187-272)||(26907970-26908055)
chr4 (177-241)||(56474686-56474750)
chr4 (177-272)||(2575678-2575773)
chr4 (182-233)||(46634193-46634244)
chr4 (233-272)||(53786103-53786142)
chr4 (203-272)||(39606086-39606155)
chr4 (177-230)||(49449093-49449146)
chr4 (200-236)||(38510695-38510731)
chr4 (236-272)||(46634235-46634271)
[»] chr2 (37 HSPs)
chr2 (177-272)||(22888705-22888800)
chr2 (177-272)||(1248774-1248869)
chr2 (182-269)||(6049236-6049323)
chr2 (177-272)||(18254097-18254192)
chr2 (177-272)||(43487467-43487562)
chr2 (177-272)||(42421786-42421881)
chr2 (177-272)||(3838768-3838863)
chr2 (177-272)||(9647220-9647315)
chr2 (177-272)||(9990779-9990874)
chr2 (177-272)||(41195672-41195767)
chr2 (177-271)||(9207678-9207772)
chr2 (177-272)||(2076657-2076752)
chr2 (177-272)||(9194329-9194424)
chr2 (177-272)||(37737859-37737954)
chr2 (177-272)||(41042342-41042437)
chr2 (186-271)||(41056636-41056721)
chr2 (177-233)||(6511339-6511395)
chr2 (188-272)||(9760117-9760201)
chr2 (182-272)||(19633375-19633466)
chr2 (182-272)||(19830276-19830367)
chr2 (177-272)||(32477420-32477515)
chr2 (177-248)||(42091416-42091487)
chr2 (186-272)||(25270470-25270556)
chr2 (186-272)||(3097749-3097835)
chr2 (186-272)||(13333058-13333144)
chr2 (177-271)||(34944979-34945073)
chr2 (200-272)||(21611543-21611615)
chr2 (177-272)||(7698259-7698354)
chr2 (177-272)||(27490618-27490713)
chr2 (183-233)||(17388530-17388580)
chr2 (177-248)||(19109005-19109076)
chr2 (35-77)||(18606779-18606821)
chr2 (177-233)||(44287369-44287425)
chr2 (181-272)||(17767932-17768023)
chr2 (177-219)||(23690449-23690491)
chr2 (177-243)||(39147854-39147920)
chr2 (177-233)||(22416301-22416357)
[»] chr8 (21 HSPs)
chr8 (182-272)||(34186700-34186790)
chr8 (177-272)||(27325846-27325941)
chr8 (177-272)||(4054174-4054269)
chr8 (177-272)||(7271938-7272033)
chr8 (177-272)||(12898817-12898912)
chr8 (182-269)||(32501087-32501174)
chr8 (177-272)||(37449313-37449408)
chr8 (177-272)||(42768292-42768387)
chr8 (188-266)||(36251425-36251503)
chr8 (177-271)||(36660339-36660433)
chr8 (186-266)||(5277393-5277473)
chr8 (177-272)||(22719528-22719623)
chr8 (177-272)||(29025348-29025443)
chr8 (177-272)||(11253430-11253525)
chr8 (182-268)||(43397874-43397960)
chr8 (177-269)||(36816507-36816599)
chr8 (189-272)||(24479323-24479406)
chr8 (177-272)||(37133750-37133845)
chr8 (177-233)||(10731634-10731690)
chr8 (177-233)||(31249451-31249507)
chr8 (182-272)||(34639626-34639716)
[»] scaffold0098 (1 HSPs)
scaffold0098 (181-272)||(49387-49478)
[»] scaffold0056 (1 HSPs)
scaffold0056 (177-272)||(76507-76602)
[»] chr7 (24 HSPs)
chr7 (177-272)||(24614204-24614299)
chr7 (177-272)||(38956506-38956601)
chr7 (182-272)||(3937011-3937101)
chr7 (177-272)||(44895460-44895555)
chr7 (177-271)||(32529745-32529839)
chr7 (177-272)||(22918057-22918152)
chr7 (177-272)||(25192805-25192900)
chr7 (177-272)||(40112842-40112937)
chr7 (186-272)||(46022155-46022241)
chr7 (177-272)||(43025428-43025523)
chr7 (177-272)||(48062145-48062240)
chr7 (186-272)||(7701641-7701727)
chr7 (177-272)||(41189429-41189526)
chr7 (177-272)||(41989628-41989725)
chr7 (177-271)||(47391214-47391308)
chr7 (182-247)||(44189223-44189288)
chr7 (177-272)||(45851095-45851187)
chr7 (177-233)||(38861184-38861240)
chr7 (200-272)||(43942743-43942815)
chr7 (177-272)||(35072250-35072345)
chr7 (177-272)||(40417862-40417957)
chr7 (177-233)||(38073308-38073364)
chr7 (177-272)||(35098591-35098686)
chr7 (177-243)||(17945156-17945222)
[»] scaffold0199 (1 HSPs)
scaffold0199 (182-272)||(8761-8851)
[»] scaffold0519 (1 HSPs)
scaffold0519 (177-272)||(11870-11965)
[»] scaffold0067 (1 HSPs)
scaffold0067 (177-233)||(35611-35667)
[»] scaffold0041 (1 HSPs)
scaffold0041 (181-233)||(10890-10942)


Alignment Details
Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1671630 - 1671725
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  1671630 attgttttggtttttgtgtcagtacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 1671725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 7287172 - 7287077
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  7287172 attgttttggtttttgtgtcactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 7287077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 33037608 - 33037703
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  33037608 attgctttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33037703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 18258771 - 18258681
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18258771 tttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 18258681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 26791227 - 26791132
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| ||||| |||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  26791227 attgctttggtttttgtgccactaactcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26791132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 28467436 - 28467341
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||| ||||||||||| || |||| || ||||||||||||    
T  28467436 attgttttggtttttgtgtcactgcctcatttcctttataaaattttggttgtcacaaaaattgtcacatatatgaatgttcagataacacaactc 28467341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 28306115 - 28306020
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||| |||||| ||||||||||||| |||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  28306115 attgctttggtctttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 28306020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36739036 - 36739131
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||| ||| |||||| ||| ||||||||||| || |||||||| ||||||| |||||||||||||||    
T  36739036 attgctttggtttttgtgtcactacctcatttcttttgtaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 36739131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 1764312 - 1764406
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||| |||||||||| || |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| || |||| ||||||||||||||    
T  1764312 attgctttggtttttatgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaact 1764406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 41321348 - 41321438
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||||||||| ||||| | |||||||||||||||    
T  41321348 tttggtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatattcaaataacacaactc 41321438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 13168615 - 13168704
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    ||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||| || ||||  |||||||||||||    
T  13168615 tttggtttttgtgccactatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatgaatgttgaaataacacaact 13168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 8686979 - 8687074
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||| |||||||||| |||| |||||| |||||||| | |||||||||||||||| || |||| |||||||||| ||||    
T  8686979 attgttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgttataaaagttgtcacatatatgaatgttcaaataacactactc 8687074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 14051298 - 14051203
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| ||| |||||||||||||| |||||||| |||||||   |||||||||||||    
T  14051298 attgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttatcacatatatggatgtttgaataacacaactc 14051203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 14923161 - 14923256
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| ||| || |||| ||||||||||||||| | ||||| |||||||||||||||    
T  14923161 attgctttggtttttgtgccactacctcatttcttttgtaaaattttggttttcacgaaagttgtcacatatatcgatgttcaaataacacaactc 14923256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 15479557 - 15479652
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| || ||||| ||||||||||  ||| |||||| || |||||||||||||||||||||| | ||||||| |||||||||||||||    
T  15479557 attgttttggttattttgtcaatacctcattttttttgtaaaattttaattgtcacaaaagttgtcacatttatggatgttcaaataacacaactc 15479652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 17626083 - 17626169
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  17626083 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 17626169  T

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Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 2972412 - 2972504
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| |||| ||||||||||| ||||||||||||||  | |||| ||||||||||||||||||||||||||| |  |||| ||||||||||||    
T  2972412 attgctttgatttttgtgtcaatacctcatttccttcgtgaaattttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaa 2972504  T

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Target: chr5; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1274446 - 1274540
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| || |||||| ||||| |||||| ||| ||| || |||||||||||||||| ||||||| |||||||||||||||    
T  1274446 attgctttggtttttgtgtcaatatctcattccctttgtaaaattttggttg-cataaaagttgtcacatatatggatgttcaaataacacaactc 1274540  T

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Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 5168271 - 5168366
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||| ||||||||||||| |||| |||||| ||  |||||||||||||||||| |||| || |||| |||||||||||||||    
T  5168271 attgctttgatttttgtgccactacctcattttctttgtaaaattttagttgtcacaaaagttgtcatatatatgaatgttcaaataacacaactc 5168366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 264
Target Start/End: Complemental strand, 7076551 - 7076464
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataa 264  Q
    |||| ||||||||||||| || ||| ||||||||||| |||||| ||| ||||||||||||||||||||||| || |||| |||||||    
T  7076551 attgctttggtttttgtgccattacttcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataa 7076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 35634819 - 35634723
Alignment:
Q  177 attgttttggtttttgtgtcactacctcattt-cctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| || ||  |||||| ||||| |||||| ||| || ||| |||||||||||||||| ||||||| |||||||||||||||    
T  35634819 attgttttggtttttgtgccaataattcattttcctttgtaaaattttggttatcataaaagttgtcacatatatggatgttcaaataacacaactc 35634723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 42175021 - 42175101
Alignment:
Q  189 tttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    ||||||||||||||  |||||||||||||||| |||| ||||| |||||||| ||||||| | ||||| ||||||||||||||    
T  42175021 tttgtgtcactacc--atttcctttataaaattttgactgtcataaaagttgacacatatatcgatgttcaaataacacaact 42175101  T

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Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 272
Target Start/End: Original strand, 3565194 - 3565267
Alignment:
Q  199 tacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||| |||| |||||| ||| ||||| |||||||||||||  | |||||||| |||||||||||||||    
T  3565194 tacctcattttctttgtaaaattttggttgtctcaaaagttgtcactcaagtggatgttcaaataacacaactc 3565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 7552940 - 7552855
Alignment:
Q  187 tttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||| ||| |||||| ||||  ||||| ||| ||||||||||||||||||  ||  ||||||| |||||||||||||||    
T  7552940 tttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactc 7552855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 35646471 - 35646527
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||  ||||||||    
T  35646471 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 35646527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 13309976 - 13310063
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||||||||||||| | |||||||||| |||| |||||  ||||||||| ||||| ||||||  ||  ||||||| ||||||||||||    
T  13309976 tttggtttttgtgttaatacctcattttctttgtaaaaatttgattgtctcaaaaattgtcatctaaatggatgttcaaataacacaa 13310063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 22972205 - 22972300
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||| | | ||||| |||| |||| |||||| ||  ||||| |||||||||| | |||  ||||||| |||||||||||||||    
T  22972205 attgttttggtttttgtattaataccttattttctttgtaaaattttagttgtctcaaaagttgttatataaatggatgttcaaataacacaactc 22972300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 18660847 - 18660941
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| || ||| ||||||||||| |||||  |||||||| ||||||||| | |||||| || |||| | ||||| |||||||    
T  18660847 attgctttggtttttgtgccaatacttcatttcctttgtaaaagtttgattgt-acaaaagttatgacatatatgaatgttcgaataatacaactc 18660941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 39591768 - 39591863
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||| ||||||| |  ||||||| |||| |||||  ||| |||||||||| ||||||| |||  | ||||| |||||||||||||||    
T  39591768 attgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactc 39591863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 39592160 - 39592255
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||| ||||||| |  ||||||| |||| |||||  ||| |||||||||| ||||||| |||  | ||||| |||||||||||||||    
T  39592160 attgctttggtttgtgtgtcaatctctcattttctttgtaaaactttggttgtcacaaaggttgtcatataaatagatgttcaaataacacaactc 39592255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 19521986 - 19521950
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttccttt 213  Q
    |||| |||| |||||||||||||||||||||||||||    
T  19521986 attgctttgatttttgtgtcactacctcatttccttt 19521950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 5e-35; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 649857 - 649952
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  649857 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatgtggatgttcaaataacacaactc 649952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 33100896 - 33100991
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  33100896 attgttttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 33100991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 26469455 - 26469542
Alignment:
Q  185 ggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  26469455 ggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26469542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 27465040 - 27464945
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  27465040 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 27464945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 35369788 - 35369879
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacaca 268  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  35369788 attgctttgatttttgtgtcactacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacaca 35369879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 3851246 - 3851335
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataaca 266  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||||| |||||||||    
T  3851246 attgttttggtttttctgtcactacctcatttcctttataaaattttggttgtcataaaagttgtcacatatatggatgttcaaataaca 3851335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37275016 - 37274921
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |  |||||| |||||||||||||||    
T  37275016 attgctttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtaaggatgttcaaataacacaactc 37274921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 48470727 - 48470822
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| |||| || || |||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  48470727 attgttttggtttctgtgccaatatctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 48470822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 19055742 - 19055647
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| || || |||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  19055742 attgttttggtttttgtgacaatatctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 19055647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 23645499 - 23645594
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||| |||||| || |||| ||||||||| |||||    
T  23645499 attgttttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgtatgttcaaataacataactc 23645594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 31088269 - 31088364
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||  ||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  31088269 attgctttggtttttgtgccactacctcattttttttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 31088364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 45121463 - 45121369
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||| ||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  45121463 attgctttggtttttgtgccactac-tcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 45121369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 44914555 - 44914459
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcac-aaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||| |||||||||||||||||||||||||||| |||||| ||||||||| | |||| ||||||||||| ||||||| |||||||||||||||    
T  44914555 attgctttagtttttgtgtcactacctcatttcctttgtaaaattttgattgtcgcaaaaaattgtcacatatatggatgttcaaataacacaactc 44914459  T

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Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 3982009 - 3981914
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||| || ||||||| |||| |||||| |||||||||||||| |||||||||| | ||||||| |||||||||||||||    
T  3982009 attgttttggttattgtgtcaatatctcattttctttgtaaaattttgattgtcacaaatgttgtcacatttatggatgttcaaataacacaactc 3981914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 8350181 - 8350087
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||| ||||||||| |||| | ||| ||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  8350181 attgctttggtttttgtgtcactaccttatttcctttgtaaatt-ttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 8350087  T

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Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 21401490 - 21401581
Alignment:
Q  181 ttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||| |||||||||| |||| |||||| ||||||||  ||||||||||||||||  ||||||| |||||||||||||||    
T  21401490 ttttggtttttgtgtcaatacctcattttctttgtaaaattttgattgtttcaaaagttgtcacataaatggatgttcaaataacacaactc 21401581  T

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Target: chr1; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 177 - 266
Target Start/End: Original strand, 50932392 - 50932481
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataaca 266  Q
    |||| |||| ||||||||||| ||||||||||||||| |||||| ||| |||| |||||||||||||||||| ||||||| |||||||||    
T  50932392 attgctttgatttttgtgtcaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataaca 50932481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 45333799 - 45333891
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| |||| ||||||||||||||||||||||||||| |||||| || |||||||||||| || |||||||| | ||||| ||||||||||||    
T  45333799 attgctttgatttttgtgtcactacctcatttcctttgtaaaattttaattgtcacaaaaattatcacatatatagatgttcaaataacacaa 45333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 15470039 - 15469945
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||| |  |||||||||||||||||||||||| || |||||||||||| || |||||||| || |||| |||||||||||||||    
T  15470039 attgttttggtttttgcgctactacctcatttcctttataaaattttaattgtcacaaaa-ttatcacatatatgaatgttcaaataacacaactc 15469945  T

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Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 50726231 - 50726136
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| |||||||| ||||||||||||| ||||  ||||| ||| ||||||||||| || |||||||| ||||||| |||||||||||||||    
T  50726231 attgttttgatttttgtgccactacctcattttctttgcaaaattttggttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 50726136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 46907292 - 46907378
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||  |||  ||||||| |||||||||||||||    
T  46907292 gtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcgtataaatggatgttcaaataacacaactc 46907378  T

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Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 30735276 - 30735181
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||| |||||| ||  |||||||||||| ||||||||||| ||||||||||||||| || |||||||  ||||| | |||||||||||||||    
T  30735276 attgttttagtttttatgctactacctcatttactttataaaattttgattgtcacaaaaattatcacatacatggatattcaaataacacaactc 30735181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 44519134 - 44519039
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||  | ||||||||||||||| |||||| ||| || |||||||||||||||||||| || |||| |||||||||||||||    
T  44519134 attgctttgatttttgtgctaatacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44519039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 40861240 - 40861154
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacaca 268  Q
    ||||||||||||| ||||| || |||||||||||||||| ||  ||||||||||||||| ||||||| | ||||| |||||||||||    
T  40861240 tttggtttttgtgccactatcttatttcctttataaaattttagttgtcacaaaagttgacacatatatagatgttcaaataacaca 40861154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 37619642 - 37619727
Alignment:
Q  187 tttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||| || ||||||||||||||| |||||| ||| |||| | |||||||||||||||| ||||||| ||||||||| |||||    
T  37619642 tttttgtgccaatacctcatttcctttgtaaaattttggttgtaataaaagttgtcacatatatggatgttcaaataacataactc 37619727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 43775294 - 43775386
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||||||| |||||||| ||| || ||||||| |||| |||||| |||||||||| |||||||||||||||| || || | ||||||||||||    
T  43775294 attgttttagtttttgtatcaatatctcattttctttgtaaaattttgattgtcataaaagttgtcacatatatgaatattcaaataacacaa 43775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 52576285 - 52576189
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtgga-tgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |  ||||||||||||||| |||||| ||| ||||||||||||||||||| ||| || | ||| |||||||||||||||    
T  52576285 attgctttggtttttgtgccggtacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacctatatgaattgttcaaataacacaactc 52576189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 37685417 - 37685512
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||| || |||||||||||| || |||||| | || |||| ||||||||| |||||    
T  37685417 attgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37685512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37700101 - 37700006
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||||||||||||||| ||| |||||| || |||||||||||| || |||||| | || |||| ||||||||| |||||    
T  37700101 attgctttgatttttgtgtcactacctcatttcttttgtaaaattttaattgtcacaaaaattatcacatgtatgaatgttcaaataacataactc 37700006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 2571733 - 2571819
Alignment:
Q  187 tttttgtgtcactacctcatttcctttat-aaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||| |||| | ||||| ||| |||||||||||||||||| ||   ||||||| |||||||||||||||    
T  2571733 tttttgtgtcactacctcattttctttgttaaaattttggttgtcacaaaagttgtcatatgcatggatgttcaaataacacaactc 2571819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 4776849 - 4776909
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtc 242  Q
    |||| |||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||    
T  4776849 tttgatttttgtgccactacctcatttcctttataaaatttaaattgtcacaaaagttgtc 4776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 51718605 - 51718518
Alignment:
Q  181 ttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||| ||||||||||||||| ||||||||||| |||| | ||  || |||||||||||||||||    ||||||| |||||||||||||||    
T  51718605 ttttgatttttgtgtcactacttcatttcctttgtaaagttttagttatcacaaaagttgtcaca----tggatgttcaaataacacaactc 51718518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 8828104 - 8828035
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacat 246  Q
    |||| ||||||||||||| || ||||||||||| |||||||||| ||| ||||| ||||| |||||||||    
T  8828104 attgctttggtttttgtgccaatacctcatttcttttataaaattttggttgtcgcaaaaattgtcacat 8828035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 12657310 - 12657367
Alignment:
Q  177 attgttttggtttttgtgtc-actacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  12657310 attgctttggtttttgtgtccactacctcatttcctttataaaattttggttgtcaca 12657367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 6693245 - 6693301
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||| |||||| |||||    
T  6693245 attgttttggtttttatgtcaatacctcatttcctttgtaaaattttgattatcaca 6693301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 9566943 - 9566848
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| ||||  |||| || | |||||| ||| ||||| |||||||||||| |||  || |||| |||||||||||||||    
T  9566943 attgctttggtttttgtgtcaataccctattttctatgtaaaattttggttgtctcaaaagttgtcatataattgaatgttcaaataacacaactc 9566848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 15083033 - 15082939
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||  |||||||| ||||||||| | |||||| || |||| | ||||| |||||||    
T  15083033 attgctttggtttttgtgtcaatacttcatttcctttgtaaaagtttgattgt-acaaaagttttgacatatatgaatgttcgaataatacaactc 15082939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 19947727 - 19947632
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||  || |||||| ||| ||||||||||| ||| ||||| |||||||||||| |||  |  |||| |||||||||||||||    
T  19947727 attgctttggtttttgtcccaatacctccttttctttataaaattttggttgtctcaaaagttgtcatataaataaatgttcaaataacacaactc 19947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 45640390 - 45640484
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||| || || |||||||| ||| |||||| ||| |||  |||||||||||||||||| | ||||| |||||||||||||||    
T  45640390 attgctttgatttttgtgccaatatctcatttc-tttgtaaaattttggttgcaacaaaagttgtcacatatatagatgttcaaataacacaactc 45640484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 10627793 - 10627723
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacata 247  Q
    ||||||||| ||||||| ||| |||| ||||| ||||||||||| ||| ||||| ||||| ||||||||||    
T  10627793 attgttttgatttttgtatcaataccacattttctttataaaattttgtttgtctcaaaaattgtcacata 10627723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2269555 - 2269460
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| ||||| |||| ||  ||||||| ||| ||||  |||||||||||| |||  || || | |||||||||||||||    
T  2269555 attgctttggtttttgtgtcaataccttattttctaaataaaattttggttgtatcaaaagttgtcatataattgaatattcaaataacacaactc 2269460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 18434883 - 18434978
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| |||||||| || ||| |||||| ||||  ||||| ||| ||||||||||||||||||  ||  | ||| | |||||||||||||||    
T  18434883 attgttttgatttttgtgccaatacatcattttctttgcaaaattttggttgtcacaaaagttgtcatctaaatagattttcaaataacacaactc 18434978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 31827039 - 31827134
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| || |||||||  ||| |||||| ||| ||||  ||||||||||||  ||  | ||||| |||||||||||||||    
T  31827039 attgatttggtttttgtgtcaataactcattttttttgtaaaattttggttgtatcaaaagttgtcatctaaatagatgttcaaataacacaactc 31827134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 50149034 - 50149129
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |   |||||| |||| |||||| ||||||||  |||||||||||| |||    ||||| |||||||||||||||    
T  50149034 attgctttggtttttgtgtcaatcaatcattttctttgtaaaattttgattgttgcaaaagttgtcatataaaatgatgttcaaataacacaactc 50149129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 220
Target Start/End: Complemental strand, 37985359 - 37985326
Alignment:
Q  187 tttttgtgtcactacctcatttcctttataaaat 220  Q
    |||||||| |||||||||||||||||||||||||    
T  37985359 tttttgtgacactacctcatttcctttataaaat 37985326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 242
Target Start/End: Original strand, 48261228 - 48261293
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtc 242  Q
    |||| ||||||||||||| || |||||| |||||||| |||||   |||||||| |||||||||||    
T  48261228 attgctttggtttttgtgccaatacctcttttcctttgtaaaaatatgattgtctcaaaagttgtc 48261293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 3159464 - 3159516
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgt 229  Q
    |||| ||| ||||||||| |||||||||||||||||| |||||| ||| ||||    
T  3159464 attgcttttgtttttgtgccactacctcatttcctttgtaaaattttggttgt 3159516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 25509162 - 25509126
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttccttt 213  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  25509162 attgttttggtttttgtgtcaatacctcattttcttt 25509126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 272
Target Start/End: Complemental strand, 41677260 - 41677224
Alignment:
Q  236 agttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  41677260 agttgtcacatatatggatgttcaaataacacaactc 41677224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 41677307 - 41677251
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    ||||||||||||||||||  ||||||||||||  |||||||||| ||  ||||||||    
T  41677307 attgttttggtttttgtgcaactacctcattttatttataaaattttagttgtcaca 41677251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 32924264 - 32924169
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32924264 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32924169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 19149078 - 19149173
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  19149078 attgttttggtttttgtgccactaactcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 19149173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 27541485 - 27541390
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  27541485 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 27541390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 42357067 - 42356972
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  42357067 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 42356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 46623995 - 46624090
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||| |||||| | ||||||| |||||||||||||||    
T  46623995 attgttttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcacatgtatggatgttcaaataacacaactc 46624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 52939739 - 52939834
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  52939739 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatggatgttcaaataacacaactc 52939834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 35597250 - 35597344
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||||||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||| || || | ||||||||||||||    
T  35597250 attgttttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatattcaaataacacaact 35597344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 42358621 - 42358529
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| |||| ||||||||||| |||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  42358621 attgctttgatttttgtgtcaatacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 42358529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 16969549 - 16969454
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| ||||| || |||||||||||||||||| |||||| ||  ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  16969549 attgttttgatttttatgccactacctcatttcctttgtaaaattttagttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 16969454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 33939326 - 33939421
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||| |||||||||||  | ||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  33939326 attgctttggtttttgtgtcactacttcatttcctttgaataattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 33939421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 36670997 - 36670902
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| ||| |||||||||||||| |||||||| ||||||| |||||||||||||||    
T  36670997 attgctttggtttttgtgccactacctcatttcatttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 36670902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 38926716 - 38926811
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||| ||||||||| |||||| ||| ||||||| ||||||||||||||| | ||||| |||||||||||||||    
T  38926716 attgctttggtttttgtgtcactaccttatttcctttgtaaaattttggttgtcacgaaagttgtcacatatatagatgttcaaataacacaactc 38926811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41309205 - 41309300
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||||||||||||||||| |||| |||||| |||||||||||||||||| || ||||| ||||||| |||||||||||||||    
T  41309205 attgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcacaaaagttatcgcatatatggatgttcaaataacacaactc 41309300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 52254121 - 52254026
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||  ||||||||||| ||||||||||| ||||||| ||||| |||||||||    
T  52254121 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaatgacacaactc 52254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 47472418 - 47472512
Alignment:
Q  178 ttgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||| ||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| | ||||| ||||||||| |||||    
T  47472418 ttgttttagtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacataactc 47472512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 52326107 - 52326202
Alignment:
Q  177 attgttttggtttttgtgtcact-acctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| |||| |||||||||||||| |||||| |||||||||| ||||||||||| |||| ||||||| |||||||||||||||    
T  52326107 attgttttggtttttgtg-cacttacctcatttcctttgtaaaattttgattgtcataaaagttgtcatatatatggatgttcaaataacacaactc 52326202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 288814 - 288909
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||||||||| |||||||| ||| |||||| |||||||| |||| ||||||||||||| ||||| | |||||||||||||||    
T  288814 attgctttggtttttgtgtcactatctcatttcttttgtaaaattttgattgttacaatagttgtcacatatatggattttcaaataacacaactc 288909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37057040 - 37056945
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||| |||||||||||| |||||||||| |||| |||||||||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  37057040 attgtttttgtttttgtgtcaatacctcattttctttgtaaaatattggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 37056945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 44413370 - 44413283
Alignment:
Q  185 ggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||| || ||||||||||||||| |||||| || |||||||||||||||||||||||| | ||||| |||||||||||||||    
T  44413370 ggtttttgtgccaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 44413283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 24256754 - 24256660
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    ||||||||| ||||||| ||| ||||||||||||||| |||||| || |||||||||||||||||||||||| | ||| | ||||||||||||||    
T  24256754 attgttttgatttttgtatcaatacctcatttcctttgtaaaattttaattgtcacaaaagttgtcacatatatagattttcaaataacacaact 24256660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 37302639 - 37302729
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| ||||||||||||||||||  ||||| |||||||||||||||||||||| || | ||||||| ||||||| |||||||    
T  37302639 tttggtttttgtgccactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcaaatgtatggatgttcaaataagacaactc 37302729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 44856046 - 44856136
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||| |||||||||||||||||| |||||| ||| |||||| | |||||||||||||| ||||||| |||||||||||||||    
T  44856046 tttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcatacaagttgtcacatatatggatgttcaaataacacaactc 44856136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 195 - 272
Target Start/End: Original strand, 13735836 - 13735913
Alignment:
Q  195 tcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||  ||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  13735836 tcactacctcatttcctttgcaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 13735913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 272
Target Start/End: Original strand, 44383287 - 44383372
Alignment:
Q  187 tttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  44383287 tttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 44383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 5114166 - 5114261
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||||||||||||||||| |||| |||||| |||||||||| |||| ||||||||||  | ||||| |||||||||||||||    
T  5114166 attgctttgatttttgtgtcactacctcattttctttgtaaaattttgattgtcataaaaattgtcacataaatagatgttcaaataacacaactc 5114261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 5244317 - 5244408
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacaca 268  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||| ||||||||||| |  |||| |||||||||||    
T  5244317 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattgtcacatatataaatgttcaaataacaca 5244408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 26014900 - 26014995
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| |  ||||||||||||||| |||||| ||| ||||||||||||||||||||| | | |||||  ||||||||||||||    
T  26014900 attgttttggtttttgtgcccttacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatagatgtttaaataacacaactc 26014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 44813232 - 44813319
Alignment:
Q  185 ggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||| |||||||| ||||||||| |||||| ||||||| ||||||||||||||||||| | ||||| ||||| |||||||||    
T  44813232 ggtttttgtgccactacctaatttcctttgtaaaattttgattgccacaaaagttgtcacatatatagatgttcaaatcacacaactc 44813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 21217609 - 21217695
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  21217609 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 21217695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 55151695 - 55151605
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||| ||| ||||||||||| |||||| || ||||| |||||||||||||||||| |  |||| |||||||||||||||    
T  55151695 tttggtttttgtgtcaatacttcatttcctttgtaaaattttaattgtaacaaaagttgtcacatatataaatgttcaaataacacaactc 55151605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 23592555 - 23592640
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| ||||||||||||||    
T  23592555 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23592640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 8847198 - 8847289
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||||||||||||||||| || ||||||||||  ||| |||||| |||||| ||||||||||||| |||||| ||||||| ||||||||||||    
T  8847198 attgttttggtttttgtgccaatacctcattttatttgtaaaattttgattatcacaaaagttgt-acatatatggatgttcaaataacacaa 8847289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 7934063 - 7934157
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||| |||||||| ||||| |||||| |||||| ||  ||||||||||| ||||||||||| ||||||| |||||||||||||||    
T  7934063 attgctttggttttt-tgtcactatctcatatcctttgtaaaattttagttgtcacaaaaattgtcacatatatggatgttcaaataacacaactc 7934157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 20547973 - 20547902
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatat 248  Q
    |||| |||| |||||||| |||||||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  20547973 attgctttgatttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatat 20547902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 31157660 - 31157565
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| |||||||  || ||||| ||||||||| |||||| ||||| |||||| ||||| |||||||| ||||||| |||||||||||||||    
T  31157660 attgttttgatttttgtaccaatacctaatttcctttgtaaaattttgatagtcacagaagttatcacatatatggatgttcaaataacacaactc 31157565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 13348117 - 13348022
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||| ||| |||||||||| |||| |||||| ||| ||||| |||||||||||| |||  ||||||| ||||||||| |||||    
T  13348117 attgctttggtttttgtatcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgttcaaataacataactc 13348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37503730 - 37503635
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| || ||||||||||||  ||||| ||| |||||||||||||| |||||||| |  |||| |||||||||||||||    
T  37503730 attgctttgatttttgtgtcaatatctcatttcctttgcaaaattttggttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 37503635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 41505579 - 41505635
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  41505579 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 41505635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 35377064 - 35376969
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||| || ||| |||||| |||| |||||| ||| ||||||||||||||||||  ||  ||||||| |||||||||||||||    
T  35377064 attgctttgatttttgtgccaatacatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttcaaataacacaactc 35376969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 35201417 - 35201323
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    ||||||||||||||||||||| || || |||| |||| || ||| || |||||| ||||||||||||  ||  ||||||| ||||||||||||||    
T  35201417 attgttttggtttttgtgtcaatatcttattttctttgtataattttaattgtctcaaaagttgtcatttaaatggatgttcaaataacacaact 35201323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 23600703 - 23600775
Alignment:
Q  199 tacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    ||| |||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| ||||||||||||||    
T  23600703 tacntcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 23600775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 7668170 - 7668079
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| |||||||||| || ||||| || ||||||||   ||||| ||| ||||||||||||||||||||| | ||||||| ||||||||||||    
T  7668170 attgctttggtttttatgccactatcttatttccttgc-aaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaa 7668079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 45711422 - 45711355
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcac 244  Q
    |||||||||||| |||||||| ||| |||||| |||| |||||| ||| |||| ||||||||||||||    
T  45711422 attgttttggttattgtgtcaatacttcattttctttgtaaaattttggttgttacaaaagttgtcac 45711355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Complemental strand, 14226687 - 14226593
Alignment:
Q  178 ttgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||| ||  |||||| |||| |||||| |||||||||  |||| |||| |||||  ||  ||| |||||||||||||||    
T  14226687 ttgttttggtttttgtgtcaatatttcattttctttgtaaaattttgattgtcttaaaaattgttacataattgattgttcaaataacacaactc 14226593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 44445407 - 44445477
Alignment:
Q  202 ctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||| ||||||||||| ||| |||||| ||||||||| |||||| | ||||| ||||||||| |||||    
T  44445407 ctcattttctttataaaattttggttgtcataaaagttgttacatatatcgatgttcaaataacataactc 44445477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 44413905 - 44413849
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| |||||||||||||||| || ||||||| |||| |||||| ||||||||||||    
T  44413905 attgctttggtttttgtgtcaatatctcattttctttgtaaaattttgattgtcaca 44413849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 45000151 - 45000194
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaat 220  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||    
T  45000151 attgatttggtttttgtgccactacctcatttcctttgtaaaat 45000194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 51982187 - 51982282
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||| |||||||||||| ||||| |||| ||||||||||| ||  ||||| ||||| |||| | |||  ||||| | |||||||||||||||    
T  51982187 attgctttagtttttgtgtcaataccttattttctttataaaattttagttgtctcaaaaattgttatataaatggattttcaaataacacaactc 51982282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 1796028 - 1795983
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatat 222  Q
    |||||||| |||||||||| | |||||||||| |||||||||||||    
T  1796028 attgttttagtttttgtgttaatacctcattttctttataaaatat 1795983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 49087090 - 49087054
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttccttt 213  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  49087090 attgttttggtttttgtgtcaatacctcattttcttt 49087054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 5e-32; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 33430340 - 33430250
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||| || ||||||||||||||||||||    
T  33430340 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgtccaaataacacaactc 33430250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 552881 - 552976
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  552881 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 552976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 32316911 - 32316816
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |||||||||| |||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  32316911 attgctttggtttttgtgtcagtacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 32316816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 14818020 - 14818115
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||||| |||| |  |||| |||||||||||||||    
T  14818020 attgttttggtttttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcatatatataaatgttcaaataacacaactc 14818115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 15974696 - 15974791
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||| ||||| ||||||||||| |||||| ||| |||||||||||||||| |||||| ||||||| |||||||||||||||    
T  15974696 attgctttggtttttgtgttactacttcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacacaactc 15974791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 31077882 - 31077977
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||||||||||| ||||||| |||||| ||| ||||||||||||||||||||| | || || | |||||||||||||||    
T  31077882 attgttttggtttttgtgtcactacctcacttcctttgtaaaattttggttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 31077977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 1156813 - 1156903
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||| |||||||||||||||    
T  1156813 tttggtttttgtgccactatctcatttcctttacaaaattttgattgtcacaaaagttatcaaatatatggatgttcaaataacacaactc 1156903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 267
Target Start/End: Complemental strand, 18737550 - 18737460
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacac 267  Q
    |||||||||||||||||| || |||||||||| |||| |||||| ||| ||||||||||||||||||||||  ||||||| ||||||||||    
T  18737550 attgttttggtttttgtgacaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatacatggatgttcaaataacac 18737460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 13689977 - 13689882
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| ||  |||||  |||| ||||||||||| ||||||| |||||||||||||||    
T  13689977 attgctttgatttttgtgtcaatacctcatttcctttataaaattttagttgtcgtaaaaattgtcacatatatggatgttcaaataacacaactc 13689882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 16199547 - 16199633
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  16199547 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 16199633  T

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Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 5694134 - 5694039
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| ||||||||||| ||||||||||||||| |||||| | | ||||| ||||||||||||||||  || ||||  ||||||||||||||    
T  5694134 attgttttgatttttgtgtcaatacctcatttcctttgtaaaatttaggttgtctcaaaagttgtcacatacatgaatgtttaaataacacaactc 5694039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 26595437 - 26595532
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |||||||||| |||| |||||| ||| ||||  |||||||||||| |||  ||||||| |||||||||||||||    
T  26595437 attgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtttcaaaagttgtcatataaatggatgttcaaataacacaactc 26595532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 34047475 - 34047570
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| || || ||| ||| |||| |||||| ||| ||||||||||||||||||||| | ||||||| ||||||||| |||||    
T  34047475 attgctttggtttttgtgccaatatctctttttctttgtaaaattttggttgtcacaaaagttgtcacatttatggatgttcaaataacaaaactc 34047570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 8098580 - 8098524
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| |||||||||||||||||||||| ||||||||| |||||| ||| ||||||||    
T  8098580 attgctttggtttttgtgtcactaccttatttcctttctaaaattttggttgtcaca 8098524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 17551361 - 17551267
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||| | |||||||| |||||| |||| ||| |||||||||| | ||||| | |  | ||||| |||||||||||||||    
T  17551361 attgttttggtttttgtgtcaatccctcattttctttat-aaattttggttgtcacaaatgctgtcataaaaatagatgttcaaataacacaactc 17551267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 22079546 - 22079451
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| ||| |||||| ||||  ||||| ||| ||||||||||||| ||||  ||  ||||||| |||||||||||||||    
T  22079546 attgctttgatttttgtgtcaatacatcattttctttgcaaaattttggttgtcacaaaagtggtcatctaaatggatgttcaaataacacaactc 22079451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 272
Target Start/End: Original strand, 30457594 - 30457688
Alignment:
Q  178 ttgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||| |||||||||| || | | |||| ||| || || |||||||||||| |||  |||||||  || |||||||||||    
T  30457594 ttgttttggtttttgtgtcaatacctcattttctatgtgaaattttggttatctcaaaagttgtcatataaatggatgttgaattaacacaactc 30457688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 5080550 - 5080494
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||| |||||||||||||||||||||||||||| |||||| ||| || |||||    
T  5080550 attgctttagtttttgtgtcactacctcatttcctttgtaaaattttggttatcaca 5080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Complemental strand, 11014963 - 11014911
Alignment:
Q  187 tttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagtt 239  Q
    ||||||||||| |||||||||| ||| ||||||| ||||||||| ||||||||    
T  11014963 tttttgtgtcaatacctcattttcttcataaaattttgattgtctcaaaagtt 11014911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 4820455 - 4820550
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| | |||||||| |||| |||||| ||||||||| |||||||| |||  ||  | | ||| |||||||||||||||    
T  4820455 attgctttgatttttgtgtcaatgcctcattttctttgtaaaattttgattgtctcaaaagttatcatgtaaatagttgttcaaataacacaactc 4820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 33603263 - 33603168
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| |||||||||| |||| |||||| ||||   ||  ||||||||||| |||  ||||||| |||| ||||||||||    
T  33603263 attgctttgatttttgtgtcaatacctcattttctttgtaaaattttgacaatcttaaaagttgtcatataaatggatgttcaaaaaacacaactc 33603168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 243
Target Start/End: Complemental strand, 5570305 - 5570255
Alignment:
Q  193 tgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtca 243  Q
    |||||||| |||||||||||| |||||| || ||||||| |||||||||||    
T  5570305 tgtcactatctcatttcctttgtaaaattttaattgtcataaaagttgtca 5570255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 269
Target Start/End: Complemental strand, 30423524 - 30423443
Alignment:
Q  188 ttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||||| ||| |||||||||| |||||||||   ||||||||  |||||||| |||||||  | ||||| ||||||||||||    
T  30423524 ttttgtatcaatacctcattttctttataaagctttgattgtatcaaaagttatcacataaatagatgttcaaataacacaa 30423443  T

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Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 199 - 271
Target Start/End: Original strand, 11612298 - 11612370
Alignment:
Q  199 tacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||||||||| |||| |||||| |||||| |||||||| || |||||||| |  || | ||||||||||||||    
T  11612298 tacctcattttctttgtaaaattttgattatcacaaaaattatcacatatataaatattcaaataacacaact 11612370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 5e-32; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 43175077 - 43175167
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  43175077 tttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 43175167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 26732313 - 26732408
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| ||||||||||||| |||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  26732313 attgttttggtttttgtgccactacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 26732408  T

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Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 39440572 - 39440667
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| || |||| |||||||||||||||    
T  39440572 attgctttgatttttgtgtcactacctcatttcctttctaaaattttgattgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 39440667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 51986135 - 51986225
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  51986135 tttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 51986225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 23369315 - 23369220
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| ||| || ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  23369315 attgctttggtttttgtgccactacctcatttcctttgtaagattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 23369220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 26724955 - 26724860
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||  |||| ||||||||| |||||||| ||||||| |||||||||||||||    
T  26724955 attgttttggtttttgtgtcactacctcatttcctttgtaaaattttagttgttacaaaagttatcacatatatggatgttcaaataacacaactc 26724860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 44539822 - 44539917
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  44539822 attgctttggtttttgtgacactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 44539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 53801742 - 53801647
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||| |||||||||||| ||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  53801742 attgctttagtttttgtgtcaatacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 53801647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 24575834 - 24575742
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| ||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||||| | ||||| ||||||||||||    
T  24575834 attgctttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaa 24575742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 26492095 - 26492190
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||| ||||||||||| |||||| ||||||||||||||| ||||||||||| | ||||| |||||||||||||||    
T  26492095 attgctttggtttttgtgccactacttcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatagatgttcaaataacacaactc 26492190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 37297137 - 37297231
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||  |||||| ||| |||||||||||||||||| |||| ||||||| |||||||||||||||    
T  37297137 attgctttggtttttgtgtcactacctcatttccttg-taaaattttggttgtcacaaaagttgtcaaatatatggatgttcaaataacacaactc 37297231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 27965075 - 27965168
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||||||||||||||||||| |||  |||| ||| |||||||| |||||||||||||| ||||||| |||||||||||||||    
T  27965075 attgctttggtttttgtgtcactacctcatttccatta--aaattttggttgtcacagaagttgtcacatatatggatgttcaaataacacaactc 27965168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 31641548 - 31641453
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||||||||| |||||||||||||||| ||| |||||||||||||| |||| ||| || |||| |||||||||||||||    
T  31641548 attgctttgatttttgtgtcactaccttatttcctttataaaattttggttgtcacaaaagttatcacgtatatgaatgttcaaataacacaactc 31641453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 29175318 - 29175408
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||| || ||||||| |||| |||||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  29175318 tttggtttttgtgtcaatagctcatttactttgtaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 29175408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 10250498 - 10250406
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| ||||||||||||| |||||| |||||| |||| |||||| ||| ||||||||||||||||| ||||| ||||||| ||||||||||||    
T  10250498 attgctttggtttttgtgccactacttcattttctttgtaaaattttggttgtcacaaaagttgtcgcatatatggatgttcaaataacacaa 10250406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 177 - 269
Target Start/End: Original strand, 11068776 - 11068868
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| |||| ||||||||||||| ||||||||||||| |||||| ||| ||| ||||||||||||||||||| || |||| ||||||||||||    
T  11068776 attgctttgatttttgtgtcactgcctcatttcctttgtaaaattttggttgccacaaaagttgtcacatatatgaatgttcaaataacacaa 11068868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 268
Target Start/End: Complemental strand, 27051069 - 27050978
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacaca 268  Q
    ||||||||||||||||||||| || ||||||| |||| |||||| ||| ||||||||||||||||||||| | || |||| |||||||||||    
T  27051069 attgttttggtttttgtgtcaatatctcattttctttgtaaaattttggttgtcacaaaagttgtcacatttatgaatgttcaaataacaca 27050978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 36177994 - 36178089
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||  ||||||||||||||||||||||||| ||  |||||||||||||| |||||||| |  |||| |||||||||||||||    
T  36177994 attgctttggtttttgtaccactacctcatttcctttataaaattttagttgtcacaaaagttatcacatatataaatgttcaaataacacaactc 36178089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 264
Target Start/End: Original strand, 38134441 - 38134528
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataa 264  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||||||||| | || |||| |||||||    
T  38134441 attgttttggtttttgtgtcactgcctcatttcctttgtaaaattttggttatcacaaaagttgtcacatgtatgaatgttcaaataa 38134528  T

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Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 42853665 - 42853760
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| |||||||  |  ||||||| |||||||||||||||    
T  42853665 attgctttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattgtcactcaaatggatgttcaaataacacaactc 42853760  T

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Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 38382418 - 38382504
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  38382418 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 38382504  T

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Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 46213063 - 46213153
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||  ||||||||||||||||| |||||| ||| |||| ||||||||| |||||||| ||||| | |||||||||||||||    
T  46213063 tttggtttttgtgcaactacctcatttcctttgtaaaattttggttgttacaaaagttttcacatatatggattttcaaataacacaactc 46213153  T

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Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 47181938 - 47182024
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  47181938 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 47182024  T

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Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 48402171 - 48402085
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  48402171 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 48402085  T

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Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 15175634 - 15175729
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||| |||||||||  | ||||||||||||||| |||||| ||| |||| |||||||||||||||||| ||||||| ||||||| |||||||    
T  15175634 attgcttttgtttttgtgctaatacctcatttcctttgtaaaattttggttgtaacaaaagttgtcacatatatggatgttcaaataatacaactc 15175729  T

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Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 40348882 - 40348949
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcac 244  Q
    |||| ||||||||||||||||||| ||||||| ||||| ||||| |||||||||||||||||||||||    
T  40348882 attgctttggtttttgtgtcactatctcattttctttaaaaaattttgattgtcacaaaagttgtcac 40348949  T

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Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 38376468 - 38376378
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||| ||||| ||||||| |||| |||||| ||||||||||||||| || |||||||| | ||||| |||||||||||||||    
T  38376468 tttgatttttgtgccactatctcattttctttgtaaaattttgattgtcacaaaaattatcacatatatagatgttcaaataacacaactc 38376378  T

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Target: chr4; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 29531589 - 29531533
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  29531589 attgttttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcaca 29531533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 56364017 - 56363933
Alignment:
Q  188 ttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||| |||||||||| ||||||||||| ||| ||||| ||||||||||||  ||  ||||||| |||||||||||||||    
T  56364017 ttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatgtaaatggatgttcaaataacacaactc 56363933  T

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Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 5622546 - 5622641
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||  ||||||||||||||||| |||||| ||  || ||||||||||||| |||||| | ||| | |||||||||||||||    
T  5622546 attgctttggtttttgtgcaactacctcatttcctttgtaaaattttagttatcacaaaagttgtgacatatatagatcttcaaataacacaactc 5622641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 269
Target Start/End: Complemental strand, 19473937 - 19473847
Alignment:
Q  179 tgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    ||||||||||||||||||| ||| |||||| |||| |||||| ||||||||| |||||||||||| |||  || || | ||||||||||||    
T  19473937 tgttttggtttttgtgtcaatacttcattttctttgtaaaattttgattgtctcaaaagttgtcatataaatgcatcttcaaataacacaa 19473847  T

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Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 34616658 - 34616744
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| || ||||||| ||||||||||| ||| ||||| |||||||||||| |||  | ||||| |||||||||||||||    
T  34616658 gtttttgtgtcaatatctcattttctttataaaattttggttgtctcaaaagttgtcatataaatagatgttcaaataacacaactc 34616744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 256
Target Start/End: Original strand, 39478530 - 39478604
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgt 256  Q
    |||| ||||||||||| |||||||||| |||| |||||| ||| |||||||||||||||||| |||| |||||||    
T  39478530 tttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcatatatatggatgt 39478604  T

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Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 45083086 - 45083149
Alignment:
Q  203 tcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataaca 266  Q
    |||||| ||||||||||| |||||||| | |||||||||||||||| ||||||| |||||||||    
T  45083086 tcattttctttataaaattttgattgtaataaaagttgtcacatatatggatgttcaaataaca 45083149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 2268490 - 2268434
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    ||||||||||||||||||||| || |||||||||||| |||||| ||| ||||||||    
T  2268490 attgttttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcaca 2268434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 31995898 - 31995834
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgt 241  Q
    |||||||| |||||||||||| |||||||||| |||| |||||| || |||||| ||||||||||    
T  31995898 attgttttagtttttgtgtcaatacctcattttctttctaaaattttaattgtctcaaaagttgt 31995834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 268
Target Start/End: Original strand, 37997342 - 37997433
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacaca 268  Q
    |||| |||| ||||||||||| |||||||||| |||| |||||| ||| |||| |||||| || |||||||| | ||||| |||||| ||||    
T  37997342 attgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtaacaaaaattatcacatatatagatgttcaaatagcaca 37997433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 272
Target Start/End: Complemental strand, 26908055 - 26907970
Alignment:
Q  187 tttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| ||||| |||||   |||||||||| || ||||||| |||| || |||||||| ||||| | |||||||||||||||    
T  26908055 tttttgtgttactacttcattatttttataaaattttaattgtcataaaaattatcacatatatggatattcaaataacacaactc 26907970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 241
Target Start/End: Complemental strand, 56474750 - 56474686
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgt 241  Q
    ||||||||||||||||||||| |||||||||| |||| |||| | ||| ||||| ||||| ||||    
T  56474750 attgttttggtttttgtgtcaatacctcattttctttgtaaagttttggttgtctcaaaaattgt 56474686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 2575773 - 2575678
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||| ||||||| |  ||||||| |||| |||||  ||  |||||||||||||||||| |||  | ||||| |||||||||||||||    
T  2575773 attgctttggtttgtgtgtcaatctctcattttctttgtaaaactttagttgtcacaaaagttgtcatataaatagatgttcaaataacacaactc 2575678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 46634193 - 46634244
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||||||||||||||||| |||||| ||  ||||||||    
T  46634193 tttgatttttgtgtcactacctcatttcctttgtaaaattttagttgtcaca 46634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 53786142 - 53786103
Alignment:
Q  233 aaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||| ||||||| |||||||||||||||    
T  53786142 aaaagttgtcacatatatggatgttcaaataacacaactc 53786103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 272
Target Start/End: Original strand, 39606086 - 39606155
Alignment:
Q  203 tcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| ||| || ||  |||||||||||||||| |  |||| ||||||| |||||||    
T  39606086 tcatttcctttataaaattttggttatcgtaaaagttgtcacatatataaatgttcaaataatacaactc 39606155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 49449146 - 49449093
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtc 230  Q
    ||||||||||||||||||  | |||||||||| |||| |||||| |||||||||    
T  49449146 attgttttggtttttgtgctaatacctcattttctttgtaaaattttgattgtc 49449093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 200 - 236
Target Start/End: Complemental strand, 38510731 - 38510695
Alignment:
Q  200 acctcatttcctttataaaatattgattgtcacaaaa 236  Q
    |||| |||||||||||||||| |||||||||||||||    
T  38510731 accttatttcctttataaaattttgattgtcacaaaa 38510695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 46634235 - 46634271
Alignment:
Q  236 agttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  46634235 agttgtcacatatatggatgttcaaataacacaactc 46634271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 22888800 - 22888705
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  22888800 attgctttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 22888705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 1248774 - 1248869
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| || ||| |||||||||||||||||||| ||||||| |||||||||||||||    
T  1248774 attgctttggtttttgtgccactacctcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatggatgttcaaataacacaactc 1248869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 6049323 - 6049236
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    ||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  6049323 tttggtttttgtgccaatacctcatttcctttgtaaaattttgattgtcacaaaagttgtcacatatatggatgttcaaataacacaa 6049236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 18254192 - 18254097
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| ||||| |||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  18254192 attgctttggtttttgtgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 18254097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 43487467 - 43487562
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||| |||| |||||| ||||||||||| ||||||| |||||||||||||||    
T  43487467 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttggttgttacaaaaattgtcacatatatggatgttcaaataacacaactc 43487562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 42421881 - 42421786
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||| |||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  42421881 attgctttggtgtttgtgccactacctcatttcctttctaaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 42421786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 3838863 - 3838768
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| ||||||||||||| | ||||||||||| |||||| || ||| |||||||||||||||||||| | ||||| |||||||||||||||    
T  3838863 attgttttgatttttgtgtcactgcttcatttcctttgtaaaattttaattatcacaaaagttgtcacatatatagatgttcaaataacacaactc 3838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9647220 - 9647315
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||| ||||||||||| |||||| ||| |||||||||||||| || ||||| || |||| |||||||||||||||    
T  9647220 attgctttggtttttgtgtcactacttcatttcctttgtaaaattttggttgtcacaaaagttatcgcatatatgaatgttcaaataacacaactc 9647315  T

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Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9990779 - 9990874
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||  |||||| ||||||||||| |||||| || ||||||||||||||| |||||||| ||||||| |||||||||||||||    
T  9990779 attgctttggtttttgtaccactacttcatttcctttgtaaaattttaattgtcacaaaagttatcacatatatggatgttcaaataacacaactc 9990874  T

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Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41195672 - 41195767
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| || |||||||||||| |||||| ||| |||||||||||||||| |||||| || |||| |||||||||||||||    
T  41195672 attgctttggtttttgtgtcaatatctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatgaatgttcaaataacacaactc 41195767  T

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Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 271
Target Start/End: Original strand, 9207678 - 9207772
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||| || |||||||| | ||||| ||||||||||||||    
T  9207678 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaaattatcacatatatagatgttcaaataacacaact 9207772  T

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Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 2076657 - 2076752
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| |||||||||| |||| |||||| ||| ||||||||||||||||||||| | | ||||| |||||||||||||||    
T  2076657 attgctttgatttttgtgtcaatacctcattttctttgtaaaattttggttgtcacaaaagttgtcacatctattgatgttcaaataacacaactc 2076752  T

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Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 9194329 - 9194424
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||| || ||||||||||| ||| |||||| ||| ||||||||||| |||| |||||| || |||| |||||||||||||||    
T  9194329 attgttttggtttttgtgccattacctcatttcttttgtaaaattttggttgtcacaaaaattgttacatatatgaatgttcaaataacacaactc 9194424  T

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Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37737954 - 37737859
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| || |||||||||||| |||| | ||| ||||||||||||||||||||||| |||| || |||||||||||||||    
T  37737954 attgctttgatttttgtgtcaatatctcatttcctttgtaaagttttggttgtcacaaaagttgtcacatatatggacgttcaaataacacaactc 37737859  T

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Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 41042342 - 41042437
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||| ||||| || ||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||||| ||||||||| |||||    
T  41042342 attgctttggtttttatgtcaatatctcatttcctttataaaattttggttgtcataaaaattgtcacatatatggatgttcaaataacagaactc 41042437  T

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Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 41056721 - 41056636
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| ||||||||||||||    
T  41056721 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaact 41056636  T

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Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 6511339 - 6511395
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  6511339 attgctttggtttttgtgtcactacctcatttcctttataaaattttgattgtcaca 6511395  T

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Target: chr2; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 188 - 272
Target Start/End: Original strand, 9760117 - 9760201
Alignment:
Q  188 ttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||| |||||||||||||||||   ||||| ||| ||||||||||||||||||||||| | ||||| |||||||||||||||    
T  9760117 ttttgtgccactacctcatttccttggaaaaattttggttgtcacaaaagttgtcacatatatagatgttcaaataacacaactc 9760201  T

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Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 19633375 - 19633466
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtc-acatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| || |||||| |  |||| ||||||| |||||||    
T  19633375 tttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19633466  T

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Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 19830276 - 19830367
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtc-acatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||| || |||||| |  |||| ||||||| |||||||    
T  19830276 tttggtttttgtatcactacctcatttcctttgtaaaattttgattgtcacaaaagttatcaacatatataaatgttcaaataatacaactc 19830367  T

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Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 32477420 - 32477515
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||| | | ||||||||||||||| | |||| ||| ||||||||||||||||||||||| || |||| |||||||||||||||    
T  32477420 attgctttgatttttgtatgaatacctcatttcctttgtcaaattttggttgtcacaaaagttgtcacatatatgaatgttcaaataacacaactc 32477515  T

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Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 42091487 - 42091416
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatat 248  Q
    |||| ||||||||||||||||||||||| |||||||| |||||| ||| ||||||||||| |||||||||||    
T  42091487 attgctttggtttttgtgtcactacctcgtttcctttgtaaaattttggttgtcacaaaaattgtcacatat 42091416  T

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Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 25270556 - 25270470
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| | |||||||||| |||  ||||||| |||||||||||||||    
T  25270556 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcgaaagttgtcatataaatggatgttcaaataacacaactc 25270470  T

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Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 3097835 - 3097749
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||| | || ||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  3097835 gtttttgtgtaaataactcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 3097749  T

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Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 13333144 - 13333058
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| ||| |||||| ||||||||||| ||| ||||| |||||||||||| |||  | ||||| |||||||||||||||    
T  13333144 gtttttgtgtcaatacatcattttctttataaaattttggttgtctcaaaagttgtcatataaatcgatgttcaaataacacaactc 13333058  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 34945073 - 34944979
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||| |||| |||||||| |||||||||||||| ||| |||||| ||| ||||||| ||||||||||||||| || || | ||| ||||||||||    
T  34945073 attgctttgatttttgtgccactacctcatttcttttgtaaaattttggttgtcacgaaagttgtcacatatatgaatattcaattaacacaact 34944979  T

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Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 200 - 272
Target Start/End: Complemental strand, 21611615 - 21611543
Alignment:
Q  200 acctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||| ||| |||||| ||| |||||| |||||||||||||||| ||||||| |||||||||||||||    
T  21611615 accttatttcatttgtaaaattttggttgtcataaaagttgtcacatatatggatgttcaaataacacaactc 21611543  T

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Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 7698259 - 7698354
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||| |||||||| ||||||||| |||||| || ||| ||||||||||| |||||| | | ||||| | |||||||||||||    
T  7698259 attgctttgatttttgtgccactacctaatttcctttgtaaaattttaattatcacaaaagttatcacatgtatagatgttctaataacacaactc 7698354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 27490713 - 27490618
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||| | ||| |||||| |||| |||||| ||||||||||||||||||||||   |  ||||||| |||||||||||||||    
T  27490713 attgctttgatttttgtgttaatacatcattttctttgtaaaattttgattgtcacaaaagttgtcatcaaaatggatgttcaaataacacaactc 27490618  T

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Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 233
Target Start/End: Complemental strand, 17388580 - 17388530
Alignment:
Q  183 ttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  17388580 ttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcaca 17388530  T

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Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 248
Target Start/End: Complemental strand, 19109076 - 19109005
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatat 248  Q
    |||| |||| |||||||| |||||| |||||||||||  |||| |||  |||||||||||||||||||||||    
T  19109076 attgctttgatttttgtgccactacttcatttcctttgcaaaaaatttgttgtcacaaaagttgtcacatat 19109005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 18606821 - 18606779
Alignment:
Q  35 ataaaaaagtttttccttaaaatactaaatcattatatcatca 77  Q
    |||||||||||||| ||||||||||||||||||| ||||||||    
T  18606821 ataaaaaagttttttcttaaaatactaaatcattttatcatca 18606779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 44287425 - 44287369
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||||||||||| ||||| ||| |||||||||||||| |||||| ||| ||||||||    
T  44287425 attgttttggttattgtgccacaacctcatttcctttgtaaaattttggttgtcaca 44287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 17768023 - 17767932
Alignment:
Q  181 ttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||| | | |||||| ||||| |||| ||| |||||| |||||||||||  | |  || |||| |||||||||||||||    
T  17768023 ttttggtttttgtgtcaatgcttcattttctttacaaaaaattaattgtctcaaaagttgtcgtaaaaatgaatgttcaaataacacaactc 17767932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 219
Target Start/End: Complemental strand, 23690491 - 23690449
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaa 219  Q
    ||||||||||||||||||||| |||||| |||||||| |||||    
T  23690491 attgttttggtttttgtgtcaatacctcttttcctttgtaaaa 23690449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 39147854 - 39147920
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtca 243  Q
    ||||||||| ||||||||||| ||||||||||  ||| |||| |  |||||||| ||||||||||||    
T  39147854 attgttttgatttttgtgtcaatacctcattttttttgtaaatttatgattgtcccaaaagttgtca 39147920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 22416301 - 22416357
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||| |||| |||||||| |||| |||||| ||| ||||||||    
T  22416301 attgctttggtttttgtgccactgcctcattttctttgtaaaattttggttgtcaca 22416357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 1e-29; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 34186700 - 34186790
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  34186700 tttggtttttgtgtcactacctcatttcctttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcaaataacacaactc 34186790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 27325846 - 27325941
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| |||||| |||| ||||||||||||||| ||||||| |||||||||||||||    
T  27325846 attgctttggtttttgtgccactacctcatttcctttgtaaaattttgattatcacgaaagttgtcacatatatggatgttcaaataacacaactc 27325941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 4054269 - 4054174
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||||||| |  |||| |||||||||||||||    
T  4054269 attgctttggtttttgtgtcactacctcatttcatttgtaaagttttgattgtcacaaaagttgtcacatatataaatgttcaaataacacaactc 4054174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 7271938 - 7272033
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||||||||| |||||||| |||  ||||| ||||||||||||||||||||||||| | ||||||| || ||||||||||||    
T  7271938 attgctttggtttttgtgtcactatctcatttcttttgcaaaattttgattgtcacaaaagttgtcacatgtatggatgttcatataacacaactc 7272033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 12898912 - 12898817
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||| | ||||| |||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  12898912 attgctttggtttttgcgccactatctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacataactc 12898817  T

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Target: chr8; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 182 - 269
Target Start/End: Complemental strand, 32501174 - 32501087
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| ||||||||||||||||||||||||||| |||||| ||| ||||||||||| || |||||||| ||||||| ||||||||||||    
T  32501174 tttgatttttgtgtcactacctcatttcctttgtaaaattttggttgtcacaaaaattctcacatatatggatgttcaaataacacaa 32501087  T

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Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37449408 - 37449313
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||  ||||||||||||||||| |||||| |||||| ||||||||||| |||||||| ||||| | |||||||||||||||    
T  37449408 attgctttggtttttgtgctactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatggatattcaaataacacaactc 37449313  T

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Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 42768292 - 42768387
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||| ||||||||||||| |||||| ||  ||||||||||| || |||||||| ||||||| |||||||||||||||    
T  42768292 attgctttggtttttgtgtcactgcctcatttcctttgtaaaattttagttgtcacaaaaattatcacatatatggatgttcaaataacacaactc 42768387  T

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Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 266
Target Start/End: Original strand, 36251425 - 36251503
Alignment:
Q  188 ttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataaca 266  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||| |||||||| ||||||| |||||||||    
T  36251425 ttttgtgtcactacctcatttcctttgtaaaattttgattgtcacgaaagttatcacatatatggatgttcaaataaca 36251503  T

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Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 36660433 - 36660339
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||| ||||||| |||||||| ||| |||||| ||||||||||| |||||||||||||||||| |||||| | ||||||| ||||||||||||||    
T  36660433 attgctttggttattgtgtcaatacttcattttctttataaaattttgattgtcacaaaagttatcacatttatggatgttcaaataacacaact 36660339  T

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Target: chr8; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 186 - 266
Target Start/End: Complemental strand, 5277473 - 5277393
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataaca 266  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| || ||||||||| | ||||||| |||||||||    
T  5277473 gtttttgtgtcactacctcatttcctttgtaaaattttgattgtcacataaattgtcacatgtatggatgttcaaataaca 5277393  T

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Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 22719528 - 22719623
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||  |||||||||||| |||| |||||| ||| || |||||||||||||||||||| ||| ||| |||||||||||||||    
T  22719528 attgctttggtttttgtgcaactacctcattttctttgtaaaattttggttatcacaaaagttgtcacatatatggctgttcaaataacacaactc 22719623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 29025348 - 29025443
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |||||||||| |||| |||||| ||| ||||| |||||||||||| |||  |||||||  ||||||||||||||    
T  29025348 attgctttggtttttgtgtcaatacctcattttctttgtaaaattttggttgtcccaaaagttgtcatataaatggatgtttaaataacacaactc 29025443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 11253525 - 11253430
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |||||||||| |||| |||||| ||| | |||||||||||||||| || | | ||||| ||||||| |||||||    
T  11253525 attgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactc 11253430  T

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Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 43397874 - 43397960
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacaca 268  Q
    ||||||||||||| ||||| ||||||| |||| |||||| ||| |||||||||||| |||||||| | ||||||| ||| |||||||    
T  43397874 tttggtttttgtgccactatctcattttctttgtaaaattttggttgtcacaaaagctgtcacatgtatggatgttcaattaacaca 43397960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 269
Target Start/End: Complemental strand, 36816599 - 36816507
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaa 269  Q
    |||| |||| ||||||||| | ||| |||||| ||||  ||||| |||||| |||||||||||||||||||| | ||||| ||||||||||||    
T  36816599 attgctttgatttttgtgttaatacgtcattttctttgcaaaattttgattatcacaaaagttgtcacatatatagatgttcaaataacacaa 36816507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 272
Target Start/End: Original strand, 24479323 - 24479406
Alignment:
Q  189 tttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| || |||||||||||| |||||| ||  |||||||||||||| ||| |||| || |||  |||||||||||||||    
T  24479323 tttgtgtcaatatctcatttcctttgtaaaattttagttgtcacaaaagttatcatatatatgaatgctcaaataacacaactc 24479406  T

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Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 37133845 - 37133750
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| ||  |||||| |||| |||||| ||| ||||||||||||||||||  ||  |||||||  ||||||||||||||    
T  37133845 attgctttgatttttgtgtcaatatatcattttctttgtaaaattttggttgtcacaaaagttgtcatctaaatggatgttaaaataacacaactc 37133750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 10731634 - 10731690
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| |||| ||||||||||| ||| ||||||||||| |||||| ||||||||||||    
T  10731634 attgctttgatttttgtgtcaatacttcatttcctttgtaaaattttgattgtcaca 10731690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Complemental strand, 31249507 - 31249451
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||  |||||||||||||||||| |||||| ||| ||||||||    
T  31249507 attgctttggtttttgtaccactacctcatttcctttgtaaaattttggttgtcaca 31249451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 34639626 - 34639716
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||| |||||||||||||||||||  ||| |||||| |||||| || ||||| || |||  ||  ||||||| ||||||||| |||||    
T  34639626 tttggttattgtgtcactacctcattttatttgtaaaattttgattctctcaaaaattatcatgtaaatggatgttcaaataacataactc 34639716  T

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Target: scaffold0098 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Original strand, 49387 - 49478
Alignment:
Q  181 ttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||||||||||||| ||||||| ||||||||| |||||    
T  49387 ttttggtttttgtgtcactacctcatttcctttgtaaaattttggttatcacaaaagttgtcacatatatggatgttcaaataacataactc 49478  T

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Target: scaffold0056 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 76602 - 76507
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| |||||||  ||||||||||||||    
T  76602 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttaaaataacacaactc 76507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 24614299 - 24614204
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| |||||||| || |||| |||||||||||||||    
T  24614299 attgctttggtttttgtgtcactacctcatttcctttgtaaaattttgattatcacaaaagttatcacatatatgaatgttcaaataacacaactc 24614204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 38956601 - 38956506
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| |||||||| |||||||||||||||||| |||||| ||| ||||||||||||||||||||||| ||||||| |||||||||||||||    
T  38956601 attgctttgttttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgtcacatatatggatgttcaaataacacaactc 38956506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 272
Target Start/End: Complemental strand, 3937101 - 3937011
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||| || |||||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| |||||||||||||||    
T  3937101 tttggtttttgtgccaatacctcatttcctttataaaattttggttgtcacaaaagttgtcacatgtatggatgttcaaataacacaactc 3937011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 44895555 - 44895460
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||||| |||||| ||||||| ||||||||| |||||    
T  44895555 attgctttggtttttgtgccactacctcatttcctttgtaaaattttggttgtcacaaaagttgttacatatatggatgttcaaataacataactc 44895460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 32529839 - 32529745
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    |||| |||||||||| | ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||  ||||||||||||||    
T  32529839 attgctttggtttttttatcactacctcatttcctttgtaaaattttgattgtcacaaaaattgtcacatatatggatgctcaaataacacaact 32529745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 22918152 - 22918057
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||| | ||||||  ||||||| |||||||    
T  22918152 attgctttggtttttgtgccactacctcatttcctttgtaaaattttgattgtcgcaaaagttgtcacatgtatggatgctcaaataatacaactc 22918057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 25192900 - 25192805
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||||||||||||| |||| |||||| ||  ||||||||||||||||||||| | || || | |||||||||||||||    
T  25192900 attgttttggtttttgtgtcactacctcattttctttgtaaaattttagttgtcacaaaagttgtcacatgtatgaatattcaaataacacaactc 25192805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 40112937 - 40112842
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||| ||||||||| |||||| |||||||||| | ||||||| |||||| ||||||| |||||||||||||||    
T  40112937 attgctttggtttttgtgccactaccttatttcctttgtaaaattttgattgtcagagaagttgttacatatatggatgttcaaataacacaactc 40112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 186 - 272
Target Start/End: Complemental strand, 46022241 - 46022155
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  46022241 gtttttgtgtcaatacctcattttctttataaaattttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 46022155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 43025428 - 43025523
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| ||||| |||||||||||| |||||| ||  |||| |||||||||||||||||| | ||||| | |||||||||||||    
T  43025428 attgctttggtttttgtgccactatctcatttcctttgtaaaattttagttgttacaaaagttgtcacatatatagatgttcgaataacacaactc 43025523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 48062145 - 48062240
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| ||||||||| ||||| || ||||  |   |||||| |||||||||||||||    
T  48062145 attgttttggtttttgtgtcaatacctcattttctttataaaattttgattgtctcaaaaattatcactcaaacggatgttcaaataacacaactc 48062240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 186 - 272
Target Start/End: Original strand, 7701641 - 7701727
Alignment:
Q  186 gtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||| |||||||||| ||||||||||  ||| ||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  7701641 gtttttgtgtcaatacctcattttctttataaaactttggttgtctcaaaagttgtcatataaatggatgttcaaataacacaactc 7701727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 41189526 - 41189429
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcac--atatgtggatgtccaaataacacaactc 272  Q
    |||| ||| |||||||||||| ||||||||||||||| |||||| |||||||||| ||||||| ||||  |||| || |||| |||||||||||||||    
T  41189526 attgctttagtttttgtgtcaatacctcatttcctttgtaaaattttgattgtcataaaagttatcacatatatatgaatgttcaaataacacaactc 41189429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 41989725 - 41989628
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttat--aaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||| |||||||||||||  ||| |  ||||| ||| |||||||||||||| |||||||| ||||||| |||||||||||||||    
T  41989725 attgctttggtttttgtgccactacctcattttttttttgtaaaattttggttgtcacaaaagttatcacatatatggatgttcaaataacacaactc 41989628  T

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Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 177 - 271
Target Start/End: Complemental strand, 47391308 - 47391214
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaact 271  Q
    ||||||||| ||||||||||| ||  ||||||||||||||||||||||||||||  ||||||| | |||||| || |||| ||| ||||||||||    
T  47391308 attgttttgatttttgtgtcaatatttcatttcctttataaaatattgattgtcttaaaagttattacatatatgaatgttcaactaacacaact 47391214  T

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Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 44189288 - 44189223
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacata 247  Q
    ||||||||||||||||||| ||||||||||||  ||| | |||||||||||||||||| |||||||    
T  44189288 tttggtttttgtgtcactaactcatttcctttgaaaatttttgattgtcacaaaagttatcacata 44189223  T

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Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 45851187 - 45851095
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| ||||||||||||||||||   ||||||||||| |||||| ||  |||||| |||| |||| ||| || ||||||| |||||||||||||||    
T  45851187 attgctttggtttttgtgtcact---tcatttcctttgtaaaattttagttgtcaaaaaaattgtgacagatatggatgttcaaataacacaactc 45851095  T

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Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 38861184 - 38861240
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||||||||||||||||| |||||||| |||| |||| |||||| ||||||||||||    
T  38861184 attgttttggtttttgtgccactaccttatttactttgtaaaattttgattgtcaca 38861240  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 200 - 272
Target Start/End: Original strand, 43942743 - 43942815
Alignment:
Q  200 acctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    ||||||||| |||| |||||| ||| ||| ||||||| || |||||||| ||||||| |||||||||||||||    
T  43942743 acctcattttctttgtaaaattttggttgccacaaaaattatcacatatatggatgttcaaataacacaactc 43942815  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 35072345 - 35072250
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| |  ||||||| ||||||||||| ||| ||||  |||||||||||| |||  ||||||| || ||||||||||||    
T  35072345 attgctttgatttttgtgtcaatgtctcattttctttataaaattttggttgtttcaaaagttgtcatataaatggatgttcagataacacaactc 35072250  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 40417862 - 40417957
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||| ||||| ||||||| || |||| |||||| ||| ||||| |||||||||||  |||  | ||||| |||||||||||||||    
T  40417862 attgctttggtttttatgtcaatacctcactttctttgtaaaattttggttgtctcaaaagttgtcgtataaatagatgttcaaataacacaactc 40417957  T

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Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 38073308 - 38073364
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||| || ||||||||||||||| |||||| ||| ||||||||    
T  38073308 attgctttggtttttgtgccaatacctcatttcctttgtaaaattttggttgtcaca 38073364  T

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Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 272
Target Start/End: Complemental strand, 35098686 - 35098591
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||| ||||||||||| |  ||||||| || |||||||| ||| ||||  |||||||||||| |||  ||||| | |||||||||||||||    
T  35098686 attgctttgatttttgtgtcaatgtctcattttctatataaaattttggttgtttcaaaagttgtcatataaatggatattcaaataacacaactc 35098591  T

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Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 243
Target Start/End: Original strand, 17945156 - 17945222
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtca 243  Q
    |||| ||||||||  ||||||||| ||  ||||||||||||| || || ||||||||||||||||||    
T  17945156 attgctttggtttcggtgtcactatctactttcctttataaattagtggttgtcacaaaagttgtca 17945222  T

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Target: scaffold0199 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 182 - 272
Target Start/End: Original strand, 8761 - 8851
Alignment:
Q  182 tttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||||| ||||||||||| |||| ||||||| |||||||||||||||    
T  8761 tttggtttttgtgtcactacctcatttcctttgtaaaattttggttgtcataaaagttgtcagatatatggatgttcaaataacacaactc 8851  T

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Target: scaffold0519 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 272
Target Start/End: Original strand, 11870 - 11965
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcacaaaagttgtcacatatgtggatgtccaaataacacaactc 272  Q
    |||| |||||||||||||||| |||||||||| |||| |||||| ||| | |||||||||||||||| || | | ||||| ||||||| |||||||    
T  11870 attgctttggtttttgtgtcaatacctcattttctttgtaaaattttggtcgtcacaaaagttgtcatatttatagatgttcaaataatacaactc 11965  T

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Target: scaffold0067 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 35611 - 35667
Alignment:
Q  177 attgttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    |||| ||||||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  35611 attgctttggtttttgtgtcactacctcattttctttgtaaaattttgattgtcaca 35667  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 10942 - 10890
Alignment:
Q  181 ttttggtttttgtgtcactacctcatttcctttataaaatattgattgtcaca 233  Q
    ||||| ||||||||| |||||||||||| ||||||||||| ||||||||||||    
T  10942 ttttgatttttgtgttactacctcattttctttataaaattttgattgtcaca 10890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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