View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10811_low_2 (Length: 281)
Name: NF10811_low_2
Description: NF10811
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10811_low_2 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 20 - 268
Target Start/End: Original strand, 32266776 - 32267024
Alignment:
| Q |
20 |
acgcgcttggtttacattttgttataggacctattctttttggtttggcaatgcctaatggacctcccttggcaacaacgatagtagagaaaagtgaact |
119 |
Q |
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| T |
32266776 |
acgcgcttggtttacattttgttataggacctattctttttggtttggcaatgcctaatggacctcccttggcaacaacaatagtagagaaaagtgaact |
32266875 |
T |
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| Q |
120 |
aatcgtccaagaattgcttatgccatttttcttctcatacattggcataacaacaaatttaaaaggaattgccaaaaattggaaggtggtgtttgtattt |
219 |
Q |
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| T |
32266876 |
aatcgtccaagaattgcttatgccatttttcttctcatacattggcataacaacaaatttaaaaggaattgccaaaaattggaaggtggtatttgtattt |
32266975 |
T |
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| Q |
220 |
cagagtatcttatttgttgggttcttggcaaaggttcttgcatgcgtct |
268 |
Q |
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| T |
32266976 |
cagagtatcttatttgttgggttcttggcaaaggttcttgcatgcgtct |
32267024 |
T |
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