View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10814_1 (Length: 529)
Name: NF10814_1
Description: NF10814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10814_1 |
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Alignment Details
Target: chr4 (Bit Score: 510; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 1 - 518
Target Start/End: Complemental strand, 45746039 - 45745522
Alignment:
| Q |
1 |
ctctctacaatcttgatctttttggtcagtaacatgatgatttgtatttgatattttgttatgaatgttgatgttgctaacttggtctgcatcctcatca |
100 |
Q |
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| T |
45746039 |
ctctctacaatcttgatctttttggtcagtaacatgatgatttgtatttgatattttgttatgaatgttgatgttgctaacttggtctgcatcctcatca |
45745940 |
T |
|
| Q |
101 |
tatttcacctgcttttgagtcatgtaaaagtaacaaaaacaaatttttaaccagatcattcgacattttttattatcaatactttggtatcatacgagaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| |
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| T |
45745939 |
tatttcacctgcttttgagtcatgtaaaagtaacaaaaacaaatttttaaccagatcattcaacattttttattatcaatgctttggtatcatacgagaa |
45745840 |
T |
|
| Q |
201 |
tgtaacagtccagctaggtgaacaatttcctaataaaatggaaatagctacatacctgaagcttcaaaggccttgcaaatttatgcacacagcctttgtc |
300 |
Q |
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| T |
45745839 |
tgtaacagtccagctaggtgaacaatttcctaataaaatggaaatagctacatacctgaagcttcaaaggccttgcaaatttatgcacacagcctttgtc |
45745740 |
T |
|
| Q |
301 |
atctttcaccacatcaaatggtccatctttatcaaagcagaatactatataatcgtcatccggaaaaaatgacctacttgattcatcaaacttgttcaca |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45745739 |
atctttcaccacatcaaatggtccatctttatcaaagcagaatactatataatcgtcatccggaaaaaatgacctacttgattcatcaaacttgttcaca |
45745640 |
T |
|
| Q |
401 |
gttggaacaccatttttgtcatcgaccatcgatttttcgtttagttgtctcttattgcattttgtgcttttctgtgaggaatgttttttgtggaaactac |
500 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45745639 |
gttggaacaccatttttgtcatcgaccatcgatttttcgtttagttgtctcttattgcattttgtgcttttctgtgaggaatgttttttgtggaaactac |
45745540 |
T |
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| Q |
501 |
tattaaagctttcttctt |
518 |
Q |
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|||||||||||||||||| |
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| T |
45745539 |
tattaaagctttcttctt |
45745522 |
T |
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