View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10818_high_20 (Length: 256)
Name: NF10818_high_20
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10818_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 15 - 195
Target Start/End: Original strand, 51079068 - 51079250
Alignment:
| Q |
15 |
tctgcgagttcctagaaactaaaggtcaatgttcataagccttaagactgttgaacagcataactaattataccaac---cttggaaactgatattctta |
111 |
Q |
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| T |
51079068 |
tctgcgagttcctagaaactaaaggtcaatgttcataagccttaagactgttgaacagcataactaattataccaccacccttggaaactgatattctta |
51079167 |
T |
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| Q |
112 |
aatgtcttgtgttccatgtttgatatgccaaacctaaacagcagttaaaagaataaatattaaataggtaaagaatacctgatt |
195 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |
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| T |
51079168 |
aatgtcttgtgttccatgtttgatatgccaaacctaaaaagcagttaaaagaataaatgttaaataggt-aagaatacctgatt |
51079250 |
T |
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