View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10818_high_24 (Length: 249)
Name: NF10818_high_24
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10818_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 39100271 - 39100507
Alignment:
| Q |
1 |
caatattttctgagttatgcataactccaagcagaaacaaggtcaataacgtttcaaccgaaacatctcctcctgatttttgcaatattcactcagattc |
100 |
Q |
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| T |
39100271 |
caatattttctgagttatgcataactccaagcagaaacaaggtcaataacgtttcaaccgaaacatctcctcctgatttttgcaatattcactcagattc |
39100370 |
T |
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| Q |
101 |
tttcgaggatttggtcgagataggcataagcctgccatgtaatgaatcagtggaagaaaaactatgctggttgagatcacaaatcattggtaatgatgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39100371 |
tttcgaggatttggtcgagataggcataagcctgccatgtaatgaatcagtggaagaaaaactatgctggttgagatcacaaatcattggtaatgatgta |
39100470 |
T |
|
| Q |
201 |
gaattcaactctccttttggtacaagaaaacttgtct |
237 |
Q |
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||||||||||||||||||||||| ||||||||||||| |
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| T |
39100471 |
gaattcaactctccttttggtactagaaaacttgtct |
39100507 |
T |
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