View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10818_low_10 (Length: 372)
Name: NF10818_low_10
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10818_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 343; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 19 - 361
Target Start/End: Complemental strand, 43667055 - 43666713
Alignment:
| Q |
19 |
acttgtacatcttccttcactacaattcccatagctaggacattgcacacatcagcaaaaatgctaaatggtgctaaagctgataagctgcctatccatg |
118 |
Q |
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| T |
43667055 |
acttgtacatcttccttcactacaattcccatagctaggacattgcacacatcagcaaaaatgctaaatggtgctaaagctgataagctgcctatccatg |
43666956 |
T |
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| Q |
119 |
acatcccaatttcaactggtactagcataaatatgtaggaggcaagtgagggtccatatttttggaaaacagaatcaaggttttgcccaataaataccaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43666955 |
acatcccaatttcaactggtactagcataaatatgtaggaggcaagtgagggtccatatttttggaaaacagaatcaaggttttgcccaataaataccaa |
43666856 |
T |
|
| Q |
219 |
atacgcaatagctcctgcacattgtgctaccacaattataaattctgtcagataccgacccaatattccatagcatctataacccaggtctccatacgat |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43666855 |
atacgcaatagctcctgcacattgtgctaccacaattataaattctgtcagataccgacccaatattccatagcatctataacccaggtctccatacgat |
43666756 |
T |
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| Q |
319 |
cttgattccactaatggttcttctgatgccaacttatctctgc |
361 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43666755 |
cttgattccactaatggttcttctgatgccaacttatctctgc |
43666713 |
T |
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