View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10818_low_25 (Length: 279)

Name: NF10818_low_25
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10818_low_25
NF10818_low_25
[»] chr6 (19 HSPs)
chr6 (120-265)||(1334629-1334774)
chr6 (118-253)||(26402624-26402761)
chr6 (178-245)||(19369805-19369872)
chr6 (114-168)||(785384-785438)
chr6 (182-240)||(10031563-10031621)
chr6 (178-227)||(6751886-6751935)
chr6 (111-227)||(32225327-32225443)
chr6 (178-233)||(785459-785515)
chr6 (178-253)||(22745938-22746012)
chr6 (180-258)||(5579629-5579707)
chr6 (114-164)||(34197185-34197235)
chr6 (141-219)||(34595148-34595226)
chr6 (114-174)||(26178542-26178602)
chr6 (176-219)||(10157998-10158041)
chr6 (145-219)||(28715309-28715383)
chr6 (178-255)||(426518-426595)
chr6 (142-219)||(16833322-16833399)
chr6 (181-233)||(20809643-20809695)
chr6 (191-227)||(29959181-29959217)
[»] chr4 (21 HSPs)
chr4 (18-113)||(40391670-40391765)
chr4 (18-113)||(40380329-40380424)
chr4 (32-113)||(41054701-41054782)
chr4 (117-229)||(13307881-13307993)
chr4 (126-234)||(44362665-44362773)
chr4 (114-247)||(37496690-37496834)
chr4 (189-253)||(34589721-34589785)
chr4 (117-164)||(39619045-39619092)
chr4 (186-252)||(10634971-10635037)
chr4 (181-224)||(10164861-10164904)
chr4 (114-164)||(5998885-5998935)
chr4 (178-255)||(11797632-11797712)
chr4 (178-219)||(12895120-12895161)
chr4 (192-237)||(28663488-28663533)
chr4 (178-226)||(13117436-13117484)
chr4 (178-233)||(21945503-21945558)
chr4 (181-226)||(13484030-13484076)
chr4 (145-219)||(29205458-29205532)
chr4 (141-247)||(56049863-56049968)
chr4 (145-233)||(23292957-23293045)
chr4 (191-227)||(49887762-49887798)
[»] chr2 (15 HSPs)
chr2 (114-250)||(43585945-43586081)
chr2 (180-246)||(13501084-13501150)
chr2 (141-266)||(15972840-15972965)
chr2 (178-266)||(33884018-33884106)
chr2 (197-264)||(39399881-39399948)
chr2 (178-247)||(11223867-11223936)
chr2 (178-266)||(24067717-24067805)
chr2 (181-224)||(14450802-14450845)
chr2 (181-255)||(44984657-44984729)
chr2 (114-163)||(14450707-14450756)
chr2 (182-223)||(24067263-24067304)
chr2 (182-227)||(42665614-42665659)
chr2 (178-226)||(14373431-14373479)
chr2 (189-241)||(17808512-17808564)
chr2 (181-233)||(18512149-18512201)
[»] chr7 (18 HSPs)
chr7 (126-265)||(1885541-1885675)
chr7 (114-252)||(5937361-5937499)
chr7 (113-234)||(25956446-25956564)
chr7 (178-266)||(22801745-22801833)
chr7 (181-240)||(44317293-44317352)
chr7 (181-241)||(2144546-2144604)
chr7 (117-231)||(48963995-48964119)
chr7 (182-242)||(35238192-35238252)
chr7 (178-248)||(36013802-36013873)
chr7 (181-233)||(9050140-9050192)
chr7 (187-230)||(2143866-2143909)
chr7 (178-233)||(7438706-7438761)
chr7 (182-255)||(36196760-36196831)
chr7 (181-227)||(37820086-37820132)
chr7 (181-246)||(10702551-10702615)
chr7 (178-235)||(38134410-38134467)
chr7 (178-266)||(5409840-5409928)
chr7 (178-258)||(11061080-11061160)
[»] chr5 (17 HSPs)
chr5 (178-266)||(19167580-19167669)
chr5 (180-255)||(21319951-21320026)
chr5 (112-254)||(7621168-7621315)
chr5 (178-266)||(30080505-30080593)
chr5 (192-265)||(41558701-41558774)
chr5 (181-257)||(38784782-38784858)
chr5 (178-226)||(10010561-10010609)
chr5 (178-255)||(20763353-20763432)
chr5 (178-221)||(15294943-15294986)
chr5 (180-246)||(15302512-15302576)
chr5 (177-232)||(24906304-24906359)
chr5 (115-155)||(9031879-9031919)
chr5 (180-264)||(20260541-20260624)
chr5 (178-265)||(13287403-13287490)
chr5 (145-247)||(42893346-42893448)
chr5 (178-219)||(8420041-8420082)
chr5 (180-233)||(31084323-31084376)
[»] chr8 (17 HSPs)
chr8 (180-255)||(26915246-26915321)
chr8 (181-255)||(42874500-42874574)
chr8 (118-255)||(34073922-34074058)
chr8 (180-223)||(31119097-31119140)
chr8 (182-232)||(27733848-27733898)
chr8 (181-253)||(10497823-10497895)
chr8 (178-265)||(22651944-22652031)
chr8 (145-219)||(36450725-36450799)
chr8 (180-253)||(2652319-2652391)
chr8 (178-255)||(18170486-18170563)
chr8 (178-255)||(18634054-18634131)
chr8 (183-271)||(22600490-22600579)
chr8 (178-227)||(24295141-24295190)
chr8 (178-219)||(31548297-31548338)
chr8 (178-246)||(5307048-5307115)
chr8 (159-255)||(20873047-20873143)
chr8 (178-234)||(25566840-25566896)
[»] scaffold0122 (1 HSPs)
scaffold0122 (114-244)||(10247-10367)
[»] scaffold0314 (1 HSPs)
scaffold0314 (118-227)||(8954-9061)
[»] chr3 (9 HSPs)
chr3 (145-227)||(14338454-14338536)
chr3 (189-245)||(11093558-11093614)
chr3 (115-212)||(34834869-34834965)
chr3 (178-233)||(49179719-49179774)
chr3 (145-219)||(20503479-20503553)
chr3 (153-219)||(10954966-10955032)
chr3 (180-232)||(12704663-12704715)
chr3 (178-234)||(26508109-26508165)
chr3 (191-247)||(41319327-41319383)
[»] chr1 (12 HSPs)
chr1 (184-233)||(24462280-24462329)
chr1 (177-248)||(40686761-40686832)
chr1 (117-163)||(18950996-18951041)
chr1 (178-246)||(38078665-38078733)
chr1 (181-253)||(46748915-46748987)
chr1 (182-223)||(18946042-18946083)
chr1 (178-255)||(21378556-21378633)
chr1 (180-232)||(24176820-24176873)
chr1 (178-247)||(24577190-24577259)
chr1 (181-226)||(28170389-28170433)
chr1 (178-258)||(1486713-1486793)
chr1 (186-253)||(16925593-16925661)
[»] scaffold0652 (1 HSPs)
scaffold0652 (141-219)||(429-507)
[»] scaffold0024 (1 HSPs)
scaffold0024 (182-247)||(18116-18181)
[»] scaffold0050 (1 HSPs)
scaffold0050 (146-233)||(70278-70365)
[»] scaffold0504 (2 HSPs)
scaffold0504 (114-163)||(8642-8691)
scaffold0504 (182-227)||(8705-8750)
[»] scaffold0007 (1 HSPs)
scaffold0007 (180-265)||(225274-225359)


Alignment Details
Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 120 - 265
Target Start/End: Complemental strand, 1334774 - 1334629
Alignment:
Q  120 tgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||| |   ||||||| |||||||||| |||||||||||| ||||||||||    
T  1334774 tgcacggacacttctgattgaaggtgtgtcctggtgttcgacacgcatcgtgttcgacaccgacatttgtgattacattgaattatgtccttttttcaaa 1334675  T
Q  220 attttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtc 265  Q
    |||||||| ||||||||||||| ||||||||||||| || ||||||    
T  1334674 attttatccgtgtcaatgtgtctgtgtcagtgtcgtgtccggtgtc 1334629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 253
Target Start/End: Original strand, 26402624 - 26402761
Alignment:
Q  118 gttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtca--tttttt 215  Q
    |||||||||||||||||| ||||||  |||||  ||||||| ||| | |||||||||   ||||||||||||||||||  ||||||||||||  ||||||    
T  26402624 gttgcacggacacttctgattgaagaagtgtctcggtgtccaacatgtatcgtgtccgacaccgacacttgtgattacactgaattatgtcatttttttt 26402723  T
Q  216 caaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    ||||||||||||  |||| || |||| |||||||||||    
T  26402724 caaaattttatcattgtcgatctgtctgtgtcagtgtc 26402761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 19369872 - 19369805
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtg 245  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| |||||||||    
T  19369872 accgacacttgtgattacattgaattatgtcattttctcaaaattttatccgtgtcaacgtgtccgtg 19369805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 168
Target Start/End: Original strand, 785384 - 785438
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatc 168  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  785384 ctctgttgcacggacacttctgattgaaggtgtgtcctggtgtccgacacacatc 785438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 10031621 - 10031563
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgt 240  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||| ||||    
T  10031621 acacttgtgattacattgaattatgtcattttctcaaaattttatcggtgtcaacgtgt 10031563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 6751886 - 6751935
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatc 227  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  6751886 accgacacttgtgattacattgaattatgtcattttctcaaaattttatc 6751935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 32225327 - 32225443
Alignment:
Q  111 aagctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcat 210  Q
    |||||||| |||||  ||||| ||| |||||||||||||| ||||||||||| |  ||||||||   |||||||| ||||||||| |||| | | || ||    
T  32225327 aagctctgctgcacaaacactcctgattgaaggtgtgtccaggtgtccgacaggggtcgtgtccgacaccgacacctgtgattacattgactcacgttat 32225426  T
Q  211 tttttcaaaattttatc 227  Q
    ||| |||||||||||||    
T  32225427 tttctcaaaattttatc 32225443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 785459 - 785515
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcatt-ttttcaaaattttatctgtgtc 233  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||||||| |||||    
T  785459 accgacacttgtgattacattgaattatgtcattattttgaaaattttatcagtgtc 785515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 253
Target Start/End: Complemental strand, 22746012 - 22745938
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    |||||||||||||||||| ||||| |||  |||||| ||||||||||||| ||||| ||||||| |||| ||||||    
T  22746012 accgacacttgtgattacattgaaatataacattttctcaaaattttatc-gtgtcgatgtgtcagtgtgagtgtc 22745938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 5579707 - 5579629
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatc 258  Q
    |||||||||||| ||| ||||| ||||||||||| ||||||||||||| ||||| | || | ||||||||  |||||||    
T  5579707 cgacacttgtgactacattgaactatgtcattttctcaaaattttatcggtgtcgacgtattcgtgtcagcatcgtatc 5579629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 34197235 - 34197185
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacg 164  Q
    |||| |||||| ||||||||| ||||||||||||||||||| |||||||||    
T  34197235 ctctattgcactgacacttctagttgaaggtgtgtcctggtctccgacacg 34197185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Complemental strand, 34595226 - 34595148
Alignment:
Q  141 aggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||| |||||| ||||||  ||||||||   |||||||||||| |||||  |||||||||| |||||||||||    
T  34595226 aggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaa 34595148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 26178602 - 26178542
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtcc 174  Q
    ||||| |||||||||||||||| |||||||| ||||| | |||||||||||  ||||||||    
T  26178602 ctctgatgcacggacacttctgattgaaggtatgtcccgatgtccgacacgtgtcgtgtcc 26178542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 219
Target Start/End: Complemental strand, 10158041 - 10157998
Alignment:
Q  176 gtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||| ||||||||| ||||||||||||||||| |||||    
T  10158041 gtaccgacacatgtgattacattgaattatgtcattttctcaaa 10157998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 28715383 - 28715309
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||| ||||||  |||||  ||||||||   |||||||||||| |||||  ||||||||||||||||||||||    
T  28715383 gtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaa 28715309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 426518 - 426595
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||| ||||| || |||||||| ||||||||||| | ||| |||||||   ||||| ||||| |||||||    
T  426518 accgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgt 426595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 16833399 - 16833322
Alignment:
Q  142 ggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||||||||| ||| ||  ||||||| |  |||||||||||| |||||  |||| ||||| |||||||||||    
T  16833399 ggtgtgtcctggtgtcggacgcgtgtcgtgtctaacaccgacacttgtaattacactgaagtatgtgattttttcaaa 16833322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 20809695 - 20809643
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    ||||||||||||||| ||  ||||||| | ||||||||||||||||| |||||    
T  20809695 gacacttgtgattaccttagattatgttaatttttcaaaattttatcggtgtc 20809643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 29959217 - 29959181
Alignment:
Q  191 attactttgaattatgtcattttttcaaaattttatc 227  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  29959217 attacattgaattatgtcattttctcaaaattttatc 29959181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 2e-42; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 40391765 - 40391670
Alignment:
Q  18 tcatgaacggagatgctaatcctagaatgtcatgaatgtccatgttctctggatgcacaagatgaaattttgaaagataaagtttagcatagtaag 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40391765 tcatgaacagagatgctaatcctagaatgtcatgaatgtccatgttctctggatgcacgagatgaaattttgaaagataaagtttagcatagtaag 40391670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 18 - 113
Target Start/End: Complemental strand, 40380424 - 40380329
Alignment:
Q  18 tcatgaacggagatgctaatcctagaatgtcatgaatgtccatgttctctggatgcacaagatgaaattttgaaagataaagtttagcatagtaag 113  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40380424 tcatgaacagagatgctaatcctagaatgtcatgaatgttcatgttctctggatgcacgagatgaaattttgaaagataaagtttagcatagtaag 40380329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 41054701 - 41054782
Alignment:
Q  32 gctaatcctagaatgtcatgaatgtccatgttctctggatgcacaagatgaaattttgaaagataaagtttagcatagtaag 113  Q
    ||||||||| |||||||  |||||||| ||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||    
T  41054701 gctaatcctggaatgtcgcgaatgtccttgttctctggatgtacaagctgaaattttgaaagataaaatttagcatagtaag 41054782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 13307993 - 13307881
Alignment:
Q  117 tgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttc 216  Q
    ||||||||  ||||||||| |||||||  |||| ||||||| ||||||  ||||||||   ||| |||||||||||||| ||||||||||||||||| ||    
T  13307993 tgttgcaccaacacttctgattgaaggcatgtcatggtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaattatgtcattttctc 13307894  T
Q  217 aaaattttatctg 229  Q
    |||||||||||||    
T  13307893 aaaattttatctg 13307881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 44362773 - 44362665
Alignment:
Q  126 gacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaatttta 225  Q
    |||||||||| || ||||||||||| | ||||||| |||  |||||||    ||| |||||||||||||| || |||||||||||||| |||||||||||    
T  44362773 gacacttctgatttaaggtgtgtcccgatgtccgatacgtgtcgtgtctgacaccaacacttgtgattacattaaattatgtcattttctcaaaatttta 44362674  T
Q  226 tctgtgtca 234  Q
    || ||||||    
T  44362673 tcggtgtca 44362665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 247
Target Start/End: Complemental strand, 37496834 - 37496690
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagta-----------ccgacacttgtgattactttgaat 202  Q
    ||||||||||||||||||| || ||||||| |||||| ||||||||||| |  |||||||| | |           ||||||||||||||||| ||||||    
T  37496834 ctctgttgcacggacacttatgattgaaggcgtgtcccggtgtccgacatgtgtcgtgtccggcaacgacacaacaccgacacttgtgattacattgaat 37496735  T
Q  203 tatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtc 247  Q
    ||||||||||| ||||||  ||||| ||||||| ||||| |||||    
T  37496734 tatgtcattttctcaaaaaattatcggtgtcaacgtgtcagtgtc 37496690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 253
Target Start/End: Original strand, 34589721 - 34589785
Alignment:
Q  189 tgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    ||||||| ||||||||||||||||| ||||| | ||||| ||||||||||||||||||| |||||    
T  34589721 tgattacattgaattatgtcattttctcaaattgttatcggtgtcaatgtgtccgtgtccgtgtc 34589785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 39619045 - 39619092
Alignment:
Q  117 tgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacg 164  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  39619045 tgttgcacggacacttctgattgaaggtgtgtcccggtgtccgacacg 39619092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 252
Target Start/End: Complemental strand, 10635037 - 10634971
Alignment:
Q  186 ttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgt 252  Q
    ||||||| || ||||||||||||||||||||||||||||||| || || | ||| ||||||||||||    
T  10635037 ttgtgataacattgaattatgtcattttttcaaaattttatcagtatcgacgtgcccgtgtcagtgt 10634971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 10164861 - 10164904
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaatttt 224  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    
T  10164861 gacacttgtgattacattgaattatgtcattttttcaagatttt 10164904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 5998935 - 5998885
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacg 164  Q
    ||||||||||| ||||||| || |||||||||||||| |||||||||||||    
T  5998935 ctctgttgcaccgacacttatgattgaaggtgtgtccaggtgtccgacacg 5998885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 11797632 - 11797712
Alignment:
Q  178 accgacacttgtgattactttgaattatgtca---ttttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||||||||| || ||||||||||   |||||||||||||||||  ||||  ||||| |||||||| ||||||    
T  11797632 accgacacttgtgattacattaaattatgtcatttttttttcaaaattttattggtgttgatgtgcccgtgtcaatgtcgt 11797712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 12895120 - 12895161
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  12895120 accgacacttgtaattactttgaattatgtgattttttcaaa 12895161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 28663533 - 28663488
Alignment:
Q  192 ttactttgaattatgtcattttttcaaaattttatctgtgtcaatg 237  Q
    |||| ||||||||||||||||| ||||||||||||| |||||||||    
T  28663533 ttacattgaattatgtcattttctcaaaattttatccgtgtcaatg 28663488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 13117484 - 13117436
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttat 226  Q
    |||||||||||||||||| ||||||| ||||||||| || |||||||||    
T  13117484 accgacacttgtgattacattgaattttgtcattttctccaaattttat 13117436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 21945558 - 21945503
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||||||||| |||||  |||||||||||||||||||||| | ||| |||||||    
T  21945558 accgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtc 21945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 13484076 - 13484030
Alignment:
Q  181 gacacttgtgattac-tttgaattatgtcattttttcaaaattttat 226  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||||||    
T  13484076 gacacttgtgattacatttgaattatgttattttctcaaaattttat 13484030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 29205532 - 29205458
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||| |||||| |||| |  |||||||||  |||||||||||| |||||  |||||||||| |||||||||||    
T  29205532 gtgtcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaa 29205458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 247
Target Start/End: Complemental strand, 56049968 - 56049863
Alignment:
Q  141 aggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgt 240  Q
    ||||||||||||||||| || ||| ||| ||||    |||||||| | ||||||| ||||| |||||||||| | |||| | ||||| ||||| ||||||    
T  56049968 aggtgtgtcctggtgtcggatacgtatcatgtctgacaccgacacatatgattacattgaactatgtcatttct-caaattattatcggtgtcgatgtgt 56049870  T
Q  241 ccgtgtc 247  Q
    |||||||    
T  56049869 ccgtgtc 56049863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 233
Target Start/End: Original strand, 23292957 - 23293045
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||| |||||| ||||||  ||||||||   |||||||||||| ||||   |||||||||| ||||||||||| | ||| |||||||    
T  23292957 gtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 23293045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 49887798 - 49887762
Alignment:
Q  191 attactttgaattatgtcattttttcaaaattttatc 227  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  49887798 attacattgaattatgtcatttcttcaaaattttatc 49887762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 9e-36; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 114 - 250
Target Start/End: Original strand, 43585945 - 43586081
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcatttt 213  Q
    |||||||||||| ||||||||| ||||||||||||||  ||||| |||||| |||||||||   |||||||||||||||||| |||||||||||||||||    
T  43585945 ctctgttgcacgaacacttctgattgaaggtgtgtccatgtgtctgacacgtatcgtgtccgacaccgacacttgtgattacattgaattatgtcatttt 43586044  T
Q  214 ttcaaaattttatctgtgtcaatgtgtccgtgtcagt 250  Q
     ||||||||||||||||||  | ||||| ||||||||    
T  43586045 ctcaaaattttatctgtgttgacgtgtcagtgtcagt 43586081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 246
Target Start/End: Original strand, 13501084 - 13501150
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgt 246  Q
    |||||||||||||||| ||||||||||||||||| | ||||||||||| | ||| ||||||||||||    
T  13501084 cgacacttgtgattacattgaattatgtcattttcttaaaattttatcggcgtcgatgtgtccgtgt 13501150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 141 - 266
Target Start/End: Complemental strand, 15972965 - 15972840
Alignment:
Q  141 aggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgt 240  Q
    |||||||||| || ||| ||||||  ||||||||   |||||||||||| |||||  |||||| ||| ||||||||||| | |||  ||||||   ||||    
T  15972965 aggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgt 15972866  T
Q  241 ccgtgtcagtgtcgtatctggtgtct 266  Q
    | ||||| ||||||||||||||||||    
T  15972865 cagtgtccgtgtcgtatctggtgtct 15972840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 33884106 - 33884018
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtct 266  Q
    |||||||||||| |||||  ||||| |||||||||| ||| ||||||||| || || ||||||| ||||||||| ||| |||| |||||    
T  33884106 accgacacttgtaattacactgaatcatgtcattttctcacaattttatcggtatcgatgtgtctgtgtcagtgccgtgtctgatgtct 33884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 39399948 - 39399881
Alignment:
Q  197 ttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgt 264  Q
    ||||||||||||||||| | ||||||| ||| ||||||||||||| |||||  |||||| ||||||||    
T  39399948 ttgaattatgtcattttctaaaaatttcatcggtgtcaatgtgtcagtgtccatgtcgtgtctggtgt 39399881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 11223867 - 11223936
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtc 247  Q
    |||||||||||| |||||  |||||||||| ||||||||||||| ||| ||||||||  ||||| |||||    
T  11223867 accgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtc 11223936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 266
Target Start/End: Complemental strand, 24067805 - 24067717
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtct 266  Q
    |||||||||||||||| | || ||||||| |||||| ||||||||||| |  | ||||||||||| | ||| |||||| ||| ||||||    
T  24067805 accgacacttgtgatttcatttaattatgacattttctcaaaattttaccgatatcaatgtgtccttatcaatgtcgtgtctagtgtct 24067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 224
Target Start/End: Original strand, 14450802 - 14450845
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaatttt 224  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||    
T  14450802 gacacttgtgattacattgaattatgtgattttctcaaaatttt 14450845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 255
Target Start/End: Original strand, 44984657 - 44984729
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||| || ||||||||| ||||||||||||||||| ||  ||||| | ||||  |||||||||||||    
T  44984657 gacacttgtgatcacattgaattatatcattttttcaaaatttgataggtgtcgacgtgt--gtgtcagtgtcgt 44984729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 14450707 - 14450756
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacac 163  Q
    |||||||||||||||||||||| ||||||  |||||| |||||| |||||    
T  14450707 ctctgttgcacggacacttctgattgaagacgtgtcccggtgtctgacac 14450756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Complemental strand, 24067304 - 24067263
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattt 223  Q
    |||||||||||||| |||||||||||||||||  ||||||||    
T  24067304 acacttgtgattacattgaattatgtcattttcacaaaattt 24067263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 42665659 - 42665614
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatc 227  Q
    |||| ||||||||| |||||| ||||||| ||||||||||||||||    
T  42665659 acacatgtgattacattgaatcatgtcatcttttcaaaattttatc 42665614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 14373431 - 14373479
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttat 226  Q
    |||||||| ||||||||| |||||||||||||||   ||||||||||||    
T  14373431 accgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 14373479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 189 - 241
Target Start/End: Original strand, 17808512 - 17808564
Alignment:
Q  189 tgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtc 241  Q
    ||||||| ||||||||| ||||| | ||||| ||||||||||||||| |||||    
T  17808512 tgattacattgaattatatcattctatcaaatttttatctgtgtcaacgtgtc 17808564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 18512149 - 18512201
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    ||||| ||||||||| ||||||||| | ||||| ||||||||||||| |||||    
T  18512149 gacacatgtgattacattgaattatattattttctcaaaattttatcggtgtc 18512201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 126 - 265
Target Start/End: Complemental strand, 1885675 - 1885541
Alignment:
Q  126 gacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaatttta 225  Q
    |||||||||| ||||| ||||||||||||||||||||| || |  | |    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  1885675 gacacttctgattgaacgtgtgtcctggtgtccgacac-caacacgac----accgacacttgtgattacattgaattatgtcattttttcaaaatttta 1885581  T
Q  226 tctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtc 265  Q
    || ||||| |||||||||| |||||||||| || ||||||    
T  1885580 tccgtgtcgatgtgtccgtatcagtgtcgtgtccggtgtc 1885541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 5937361 - 5937499
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcatttt 213  Q
    |||| |||||||||||||||   ||||||| || | ||||||||||||| | |||||| ||   || ||||||||||||||| |||||||||||||||||    
T  5937361 ctctattgcacggacacttcatattgaaggcgtattctggtgtccgacatgtatcgtgaccgacacagacacttgtgattacattgaattatgtcatttt 5937460  T
Q  214 ttcaaaattttatctgtgtcaatgtgtccgtgtcagtgt 252  Q
     ||||||||||||| ||||  | ||||| ||||||||||    
T  5937461 ctcaaaattttatccgtgttgacgtgtctgtgtcagtgt 5937499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 113 - 234
Target Start/End: Complemental strand, 25956564 - 25956446
Alignment:
Q  113 gctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattt 212  Q
    ||||| ||||||||||||||||| ||||||| |||||| | ||||||||| | |||||||||   |||||||||||||||||| |||||||||||||  |    
T  25956564 gctctattgcacggacacttctgattgaaggcgtgtcccg-tgtccgacatgtatcgtgtccgacaccgacacttgtgattacattgaattatgtca--t 25956468  T
Q  213 tttcaaaattttatctgtgtca 234  Q
    ||||| |||||||| |||||||    
T  25956467 tttcacaattttatttgtgtca 25956446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 22801745 - 22801833
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtct 266  Q
    ||||||||||||||||||  |||||||||||||| | ||||||||| ||| ||||  | |||||||||| |||||||| || |||||||    
T  22801745 accgacacttgtgattacagtgaattatgtcattatctcaaaatttgatcggtgttgacgtgtccgtgttagtgtcgtttccggtgtct 22801833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 44317293 - 44317352
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgt 240  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||| ||||||| ||||    
T  44317293 gacacttatgattacattgaattatgtcatttttttaaaattttatcagtgtcaacgtgt 44317352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 2144546 - 2144604
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtc 241  Q
    ||||| ||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||    
T  2144546 gacacgtgtgattacattgaattatgtcattttctcaaaatttta--tgtgtcaatgtgtc 2144604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 231
Target Start/End: Original strand, 48963995 - 48964119
Alignment:
Q  117 tgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtcca----------gtaccgacacttgtgattactttgaattatg 206  Q
    ||||||| ||||||||||| |||||||| ||||| ||||| ||||||| ||||||||||            ||| |||||||||||||  ||||||||||    
T  48963995 tgttgcatggacacttctgattgaaggtatgtcccggtgttcgacacgtatcgtgtccacacttacacgacaccaacacttgtgattaaattgaattatg 48964094  T
Q  207 tcattttttcaaaattttatctgtg 231  Q
    ||||||| ||| |||||||||||||    
T  48964095 tcattttctcacaattttatctgtg 48964119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 35238192 - 35238252
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtcc 242  Q
    |||| ||||||||  ||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  35238192 acacgtgtgattatattgaattatgtcattttctcaaaatattatcggtgtcaatgtgtcc 35238252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 248
Target Start/End: Original strand, 36013802 - 36013873
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttt-tcaaaattttatctgtgtcaatgtgtccgtgtca 248  Q
    |||||||| ||||||||| |||||||||||||||||| ||||| | |||||  |||||||||||| ||||||    
T  36013802 accgacacgtgtgattacattgaattatgtcatttttctcaaattattatcattgtcaatgtgtcagtgtca 36013873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 9050140 - 9050192
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    ||||| ||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  9050140 gacacatgtgattatattgaactatgtcattttttcaaaattttatctatgtc 9050192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 2143866 - 2143909
Alignment:
Q  187 tgtgattactttgaattatgtcattttttcaaaattttatctgt 230  Q
    ||||||||| ||||||||||||||||| ||||||||| ||||||    
T  2143866 tgtgattacattgaattatgtcattttctcaaaatttaatctgt 2143909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 7438761 - 7438706
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||||||||| ||||| ||||||||||| ||||||||||| | ||| |||||||    
T  7438761 accgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtc 7438706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 36196831 - 36196760
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||||  |||||||||||  |||| |||||||||||  |||||||| | ||||||||||| |||||    
T  36196831 acacttgtgattatgttgaattatgttgttttctcaaaatttta--tgtgtcaacgcgtccgtgtcagggtcgt 36196760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 227
Target Start/End: Complemental strand, 37820132 - 37820086
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatc 227  Q
    |||||||| |||||| || |||||||| |||||||||||||||||||    
T  37820132 gacacttgcgattacattaaattatgttattttttcaaaattttatc 37820086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 10702551 - 10702615
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgt 246  Q
    ||||||| | ||||| |||||| |||||||||| ||||||||||||| || || ||||||||||||    
T  10702551 gacacttataattacattgaat-atgtcattttctcaaaattttatcagtatcgatgtgtccgtgt 10702615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 235
Target Start/End: Original strand, 38134410 - 38134467
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaa 235  Q
    |||||||| | ||||||| ||||||||||||||||| ||||| | ||||| |||||||    
T  38134410 accgacacatatgattacattgaattatgtcattttctcaaattattatcggtgtcaa 38134467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 5409840 - 5409928
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtct 266  Q
    |||||||||||| ||| |  |||||||||| ||||||||||| | ||| |||| |||  ||||| |||||  ||||||||| |||||||    
T  5409840 accgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtct 5409928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 11061080 - 11061160
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatc 258  Q
    |||||||||||| ||||   | |||||||| ||||||||||| | ||| |||||||  |||||| ||||| ||||||||||    
T  11061080 accgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatc 11061160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 19167580 - 19167669
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcatttt-ttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtct 266  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| ||||| ||||||||||||| ||||||||||    
T  19167580 accgacacttgtgattacattgaattgtgtcatttttttcaaaattttatcggtgtcaacgtgtctgtgtcagtgtcgtgtctggtgtct 19167669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 21319951 - 21320026
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  21319951 cgacacttgtgattacattgaattatatcattttttcaaaattttatccgtgtcaatgtgtccatatcagtgtcgt 21320026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 7621168 - 7621315
Alignment:
Q  112 agctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagta-----ccgacacttgtgattactttgaattatg 206  Q
    |||||||||||||||||||||||| ||||||  |||||||| ||||||| | | ||||||||   ||     |||| |||||||||||| || |||||||    
T  7621168 agctctgttgcacggacacttctgattgaagacgtgtcctgatgtccgataagtatcgtgtctgatatgacaccgatacttgtgattacattaaattatg 7621267  T
Q  207 tcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcg 254  Q
    ||| |||||  |||||||||||||||| | |||||| |||||||||||    
T  7621268 tcaatttttttaaattttatctgtgtcgacgtgtccatgtcagtgtcg 7621315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 266
Target Start/End: Original strand, 30080505 - 30080593
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtct 266  Q
    ||||| |||||||||||| ||||||||||||||||| ||||||||||||| ||||| |  | ||||||||| |||||| ||||||||||    
T  30080505 accgatacttgtgattacattgaattatgtcattttctcaaaattttatcagtgtcgacatttccgtgtcattgtcgtgtctggtgtct 30080593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 41558701 - 41558774
Alignment:
Q  192 ttactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtc 265  Q
    |||||||||||||||||||||| ||||| | |||| |||||||||||||| ||||| |||||||||| ||||||    
T  41558701 ttactttgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtc 41558774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 38784858 - 38784782
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtat 257  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||||| ||| | ||||||  |||| ||||||||||    
T  38784858 gacacttgtgattacattgaattatatcattttttcacaattttatcggtgccgatgtgttagtgttagtgtcgtat 38784782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 10010609 - 10010561
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttat 226  Q
    |||||||| |||||||||  |||||||||||||||||||||||||||||    
T  10010609 accgacacatgtgattacaatgaattatgtcattttttcaaaattttat 10010561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 20763432 - 20763353
Alignment:
Q  178 accgacacttgtgattactttgaattatgt--cattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||||||||| |||||||||||  | |||||| ||||  ||||| ||||||||||||  |||||||||||||    
T  20763432 accgacacttgtgattacgttgaattatgtaactttttttaaaaaaattatcggtgtcaatgtgtttgtgtcagtgtcgt 20763353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 15294986 - 15294943
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaat 221  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  15294986 accggcacttgtgattaccttgaattatgtcattttttcaaaat 15294943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 246
Target Start/End: Complemental strand, 15302576 - 15302512
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgt 246  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||  |||| ||||||| ||||    
T  15302576 cgacacttgtgattaccttgaatt--gtcattttttcaaaattttatcgttgtcgatgtgtctgtgt 15302512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 24906304 - 24906359
Alignment:
Q  177 taccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgt 232  Q
    ||||||||||||| |||||  |||||||||||||||||||||| | ||||||||||    
T  24906304 taccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgt 24906359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 9031879 - 9031919
Alignment:
Q  115 tctgttgcacggacacttctggttgaaggtgtgtcctggtg 155  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  9031879 tctgttgcacggacacttctgattgaaggcgtgtcctggtg 9031919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 20260541 - 20260624
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgt 264  Q
    |||||||||| | |||||||||||||||| |||||| ||||||||||| ||||| | |||| | ||| ||||| || ||||||||    
T  20260541 cgacacttgtaaatactttgaattatgtc-tttttttaaaattttatcggtgtcgacgtgttcttgttagtgttgtgtctggtgt 20260624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 13287403 - 13287490
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtc 265  Q
    ||||||||||||  ||||  |||||||||| ||||||||||| | ||||||||||| | ||||  ||||| ||||||| || ||||||    
T  13287403 accgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtc 13287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 42893448 - 42893346
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgt 244  Q
    ||||||||||||| ||||||  | |||||    |||||||||||| |||||  || ||||||| ||||||||||| | ||| |||||||  |||||||||    
T  42893448 gtgtcctggtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgt 42893349  T
Q  245 gtc 247  Q
    |||    
T  42893348 gtc 42893346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 8420082 - 8420041
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||||| ||||| ||||||||||| |||||||||||    
T  8420082 accgacacttgtaattacattgaattatgttattttttcaaa 8420041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 233
Target Start/End: Complemental strand, 31084376 - 31084323
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||||||| ||||| ||||||||||| ||||||||||| | ||| |||||||    
T  31084376 cgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtc 31084323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 7e-21; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 180 - 255
Target Start/End: Original strand, 26915246 - 26915321
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||| ||||| | |||||||||||||||||||    
T  26915246 cgacacttgtgattacattaaattatgtcattttctcaaaattttatccgtgtcgacgtgtccgtgtcagtgtcgt 26915321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 255
Target Start/End: Complemental strand, 42874574 - 42874500
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||| | ||||| | |||||||||| ||||||||    
T  42874574 gacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgtccgtgttagtgtcgt 42874500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 34073922 - 34074058
Alignment:
Q  118 gttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttca 217  Q
    |||||||  |||||| || ||||||| ||||| || ||| |||||||   ||||||   || |||||||| ||||||| || ||||||||||||||||||    
T  34073922 gttgcacaaacacttttgattgaaggcgtgtcatgatgtgcgacacgtgacgtgtctgatatcgacacttatgattacattaaattatgtcattttttca 34074021  T
Q  218 aaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||| |||||  ||||| ||| ||||||||||    
T  34074022 aaattttatcggtgtc-gtgtgttcgtatcagtgtcgt 34074058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 31119140 - 31119097
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattt 223  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  31119140 cgacacttgtgattacattgaattatgtcattttctcaaaattt 31119097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 27733898 - 27733848
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatctgtgt 232  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||| ||||    
T  27733898 acacttgtgattacattgaattatatcattttctcaaaattttatcggtgt 27733848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 10497823 - 10497895
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    ||||||||||||||| |  |||||||| ||||| ||||||||||||| |||||   ||||| |||||||||||    
T  10497823 gacacttgtgattacatcaaattatgttattttctcaaaattttatccgtgtcggcgtgtctgtgtcagtgtc 10497895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 22652031 - 22651944
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtc 265  Q
    |||||||||||| ||||  ||||||||||| ||||||||||| | ||| |||||||   ||||| ||||| ||||||| || ||||||    
T  22652031 accgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 22651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 219
Target Start/End: Original strand, 36450725 - 36450799
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    ||||||||||||| ||||||| ||||||||   ||| |||||||| |||||  |||||| ||| |||||||||||    
T  36450725 gtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaa 36450799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 253
Target Start/End: Complemental strand, 2652391 - 2652319
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    |||||||||||||||| || |||||||||||||| | |||| |||||| | ||| |||| ||||||| ||||||    
T  2652391 cgacacttgtgattacatt-aattatgtcattttctaaaaaatttatcagggtcgatgtatccgtgttagtgtc 2652319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 18170486 - 18170563
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    ||||||| |||| ||||| ||||||||||| ||||||||||| |||||  ||||||   ||||| ||||| |||||||    
T  18170486 accgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgt 18170563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Original strand, 18634054 - 18634131
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    ||||||| |||| ||||| ||||||||||| ||||||||||| |||||  ||||||   ||||| ||||| |||||||    
T  18634054 accgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgt 18634131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 22600579 - 22600490
Alignment:
Q  183 cacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtc-agtgtcgtatctggtgtctctgct 271  Q
    ||||||||||||  ||||||||||||||||| |  |||||||||  ||||  ||||||| |||||  ||||||| |||||||||| ||||    
T  22600579 cacttgtgattatattgaattatgtcattttctttaaattttattggtgttgatgtgtcagtgtcgtgtgtcgtgtctggtgtctgtgct 22600490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 24295141 - 24295190
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatc 227  Q
    |||||||||||||||||| || |||| ||||||||| ||| |||||||||    
T  24295141 accgacacttgtgattacattaaattgtgtcattttctcacaattttatc 24295190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 31548297 - 31548338
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||| ||||||||| ||||||||||||||||| |||||    
T  31548297 accgacacatgtgattacattgaattatgtcattttatcaaa 31548338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 5307115 - 5307048
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgt 246  Q
    |||||||||| ||||| | |||||||||||||| |||||||| | ||||| ||||| | ||||||||||    
T  5307115 accgacacttatgatttcattgaattatgtcat-ttttcaaattattatcagtgtcgacgtgtccgtgt 5307048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 255
Target Start/End: Complemental strand, 20873143 - 20873047
Alignment:
Q  159 gacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||| |||||||||   |||||||||||| |||||  | |||||||| ||||||||||| | |||||| ||||   ||||| ||||| |||||||    
T  20873143 gacacgtatcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgt 20873047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 25566896 - 25566840
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtca 234  Q
    |||||||||||| |||||  |||||||||| ||||||||||| | ||| ||||||||    
T  25566896 accgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtca 25566840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 10247 - 10367
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcatttt 213  Q
    |||| |||||| |||||||||| |||||||||||||||| |||||||||||||||| ||||   ||| |||        ||  |||||| ||||||||||    
T  10247 ctctcttgcacagacacttctgattgaaggtgtgtcctgctgtccgacacgcatcgcgtccgacaccaaca--------ta--ttgaataatgtcatttt 10336  T
Q  214 ttcaaaattttatctgtgtcaatgtgtccgt 244  Q
     ||||||||||||||||||||||||||||||    
T  10337 gtcaaaattttatctgtgtcaatgtgtccgt 10367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 9061 - 8954
Alignment:
Q  118 gttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcat--cgtgtccagtaccgacacttgtgattactttgaattatgtcatttttt 215  Q
    ||||||| |||||||||| ||||||| |||||| |||||||||||| ||   | || |    |||||||||||||||||| ||||||||||||||||| |    
T  9061 gttgcacagacacttctgattgaaggcgtgtcccggtgtccgacacacacgacatgac----accgacacttgtgattacgttgaattatgtcattttct 8966  T
Q  216 caaaattttatc 227  Q
    ||||||||||||    
T  8965 caaaattttatc 8954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 14338454 - 14338536
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatc 227  Q
    |||||| ||||||||| |||  |||||||    ||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  14338454 gtgtcccggtgtccgatacgtgtcgtgtctgacaccgacatttgtgattacattgaattatgtcattttttcaaaattttatc 14338536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 245
Target Start/End: Complemental strand, 11093614 - 11093558
Alignment:
Q  189 tgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtg 245  Q
    ||||||||||||||||||||||||||||||| | ||||| |||| ||||||||||||    
T  11093614 tgattactttgaattatgtcattttttcaaattattatcagtgtaaatgtgtccgtg 11093558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 34834869 - 34834965
Alignment:
Q  115 tctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattt 212  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||| | |||  ||||   ||||| ||| |||||||  ||||||||||||||||    
T  34834869 tctgttgcacggacacttctgattgaaggcgtgtcccggtgtccgacatgtatcaagtccgacaccgatactcgtgatta-attgaattatgtcattt 34834965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 178 - 233
Target Start/End: Original strand, 49179719 - 49179774
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||||||||||||||| | ||||||||||| ||| ||||||||||||| |||||    
T  49179719 accgacacttgtgattacatcgaattatgtcactttctcaaaattttatcggtgtc 49179774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 219
Target Start/End: Complemental strand, 20503553 - 20503479
Alignment:
Q  145 gtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||| |||||| |||| |  |||||||||  |||||||||||| |||||  ||||||||||||||||||||||    
T  20503553 gtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaa 20503479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 10955032 - 10954966
Alignment:
Q  153 gtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    ||||| ||||||  ||||||||   ||||||||||||||||||  |||||||||| |||||||||||    
T  10955032 gtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaa 10954966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 12704663 - 12704715
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgt 232  Q
    |||||| | ||||||| ||||||||||||||||||||||| | ||||| ||||    
T  12704663 cgacacctatgattacattgaattatgtcattttttcaaattattatccgtgt 12704715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 234
Target Start/End: Complemental strand, 26508165 - 26508109
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtca 234  Q
    |||||||||||| |||||  |||||||||| ||||||||||| | ||| ||||||||    
T  26508165 accgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtca 26508109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 41319327 - 41319383
Alignment:
Q  191 attactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtc 247  Q
    ||||| ||||||||||||||||||||||| | ||||  ||||| | |||||||||||    
T  41319327 attacattgaattatgtcattttttcaaattattattggtgtcgacgtgtccgtgtc 41319383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Original strand, 24462280 - 24462329
Alignment:
Q  184 acttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  24462280 acttgtgattacattgaattatgtcattttttcaaaatttgatcagtgtc 24462329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 248
Target Start/End: Original strand, 40686761 - 40686832
Alignment:
Q  177 taccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtca 248  Q
    ||||||||||| ||||||| ||||||||| ||||||| |||||||||||||  |||| | ||||| ||||||    
T  40686761 taccgacacttatgattacattgaattatatcattttatcaaaattttatcgatgtcgacgtgtcagtgtca 40686832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 18951041 - 18950996
Alignment:
Q  117 tgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacac 163  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||    
T  18951041 tgttgcacg-acacttctgattgaaggtgtgtcctggtgtccgacac 18950996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 246
Target Start/End: Original strand, 38078665 - 38078733
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgt 246  Q
    |||||||||||| ||||| ||||||||||| ||||||||||| | ||| ||||||| | ||||| ||||    
T  38078665 accgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt 38078733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 46748915 - 46748987
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    |||| |||||||||| ||||| |||||| ||||||||||||||||   |||||   |||||||||||||||||    
T  46748915 gacatttgtgattacattgaactatgtcgttttttcaaaattttaatggtgtcggcgtgtccgtgtcagtgtc 46748987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 223
Target Start/End: Original strand, 18946042 - 18946083
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattt 223  Q
    ||||| |||||||| ||||||||||||||||| |||||||||    
T  18946042 acactcgtgattacattgaattatgtcattttctcaaaattt 18946083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 255
Target Start/End: Complemental strand, 21378633 - 21378556
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgt 255  Q
    |||||||||||| |||||  |||||||||| ||||||||||  | ||| |||||||  ||||||| |||| |||||||    
T  21378633 accgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgt 21378556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 24176873 - 24176820
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttt-tcaaaattttatctgtgt 232  Q
    |||||||||||||||| || ||| ||||||||||| ||||||||||||| ||||    
T  24176873 cgacacttgtgattacattaaatcatgtcatttttctcaaaattttatcggtgt 24176820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 24577190 - 24577259
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtc 247  Q
    |||||||||||| |||||  |||||||||| ||||||||||| | |||  |||||||  |||||||||||    
T  24577190 accgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 28170433 - 28170389
Alignment:
Q  181 gacacttgtgattactttgaattatgtcattttttcaaaattttat 226  Q
    ||||||||| ||||| |||||||||||||| |||||||||||||||    
T  28170433 gacacttgttattacattgaattatgtcat-ttttcaaaattttat 28170389  T

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Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 1486713 - 1486793
Alignment:
Q  178 accgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatc 258  Q
    |||||||||| | |||||  |||||||||| ||||||||||| | ||| ||||||||  ||||| || || ||||||||||    
T  1486713 accgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatc 1486793  T

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Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 253
Target Start/End: Complemental strand, 16925661 - 16925593
Alignment:
Q  186 ttgtgattactttgaattatgtcatttttt-caaaattttatctgtgtcaatgtgtccgtgtcagtgtc 253  Q
    |||||||||| ||||||| ||| ||||||| |||||||||||| || || |  ||||||||||||||||    
T  16925661 ttgtgattacattgaattgtgttatttttttcaaaattttatcggtatcgacatgtccgtgtcagtgtc 16925593  T

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Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 219
Target Start/End: Original strand, 429 - 507
Alignment:
Q  141 aggtgtgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaa 219  Q
    |||||||||| |||||| ||||||| ||||||||   |||||||||||| |||||  |||||| ||| |||||||||||    
T  429 aggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaa 507  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 18116 - 18181
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtc 247  Q
    ||||||| |||||| ||||||||||| ||||| ||||||||||||| ||||| | ||||| |||||    
T  18116 acacttgcgattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgtcagtgtc 18181  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 70365 - 70278
Alignment:
Q  146 tgtcctggtgtccgacacgcatcgtgtccagtaccgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtc 233  Q
    |||||||||||| ||||||  ||||||||   |||||||||| | |||||  |||||||||| ||||||||||| | ||| |||||||    
T  70365 tgtcctggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtc 70278  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 163
Target Start/End: Original strand, 8642 - 8691
Alignment:
Q  114 ctctgttgcacggacacttctggttgaaggtgtgtcctggtgtccgacac 163  Q
    |||||||||||||||||||||| |||||||  ||||| |||||| |||||    
T  8642 ctctgttgcacggacacttctgattgaaggcatgtcccggtgtctgacac 8691  T

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Target: scaffold0504; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 8705 - 8750
Alignment:
Q  182 acacttgtgattactttgaattatgtcattttttcaaaattttatc 227  Q
    ||||||||| |||| |||||| |||||||||| |||||||||||||    
T  8705 acacttgtggttacattgaatcatgtcattttctcaaaattttatc 8750  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 265
Target Start/End: Original strand, 225274 - 225359
Alignment:
Q  180 cgacacttgtgattactttgaattatgtcattttttcaaaattttatctgtgtcaatgtgtccgtgtcagtgtcgtatctggtgtc 265  Q
    |||||||| | ||||| ||| ||||||||||||| ||||| | |||||||||||   ||||| ||||| ||||||| || ||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 225359  T

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