View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10818_low_32 (Length: 270)
Name: NF10818_low_32
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10818_low_32 |
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Alignment Details
Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 35 - 253
Target Start/End: Original strand, 14415143 - 14415361
Alignment:
| Q |
35 |
cagagactatgtgattgttcatatttgaacataattcaaatccataccttttggtatagtctcgctcttactttgaattattatgtgttagagatgtcaa |
134 |
Q |
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| T |
14415143 |
cagagactatgtgattgttcatatttgaacataattcaaatccataccttttggtatagtctcgctcttactttgaattattatgtgttagtgatgtcaa |
14415242 |
T |
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| Q |
135 |
atttaataatcaatttaagagatcgaagaaaacaaaattcgcatgttnnnnnnngacaatgattgttgaaatttagaaatgcttacaacaacgaagcagt |
234 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14415243 |
atttaataatcaatttaagagatcgaagaagacaaaattcgcatgttaaaaaaagacaatgattgttgaaatttagaaatgcttacaacaacgaagcagt |
14415342 |
T |
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| Q |
235 |
cgtgaaattgaagacgaat |
253 |
Q |
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| T |
14415343 |
cgtgaaattgaagacgaat |
14415361 |
T |
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