View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10818_low_42 (Length: 242)

Name: NF10818_low_42
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10818_low_42
NF10818_low_42
[»] chr2 (1 HSPs)
chr2 (1-240)||(28591142-28591381)
[»] chr4 (3 HSPs)
chr4 (1-240)||(23060531-23060770)
chr4 (51-240)||(37839958-37840147)
chr4 (50-140)||(50634087-50634177)
[»] chr5 (5 HSPs)
chr5 (1-240)||(30303551-30303790)
chr5 (14-104)||(24869882-24869972)
chr5 (103-144)||(31590-31631)
chr5 (103-144)||(12716089-12716130)
chr5 (103-144)||(12777320-12777361)
[»] chr6 (3 HSPs)
chr6 (1-240)||(25905533-25905772)
chr6 (1-233)||(32894702-32894934)
chr6 (1-240)||(13107350-13107589)
[»] chr8 (3 HSPs)
chr8 (1-240)||(26952629-26952868)
chr8 (1-240)||(18177832-18178071)
chr8 (1-240)||(21277575-21277814)
[»] chr1 (2 HSPs)
chr1 (1-233)||(27876383-27876615)
chr1 (74-240)||(15231293-15231458)
[»] chr3 (2 HSPs)
chr3 (7-106)||(1018041-1018140)
chr3 (22-240)||(42435711-42435929)
[»] chr7 (2 HSPs)
chr7 (23-240)||(9815400-9815617)
chr7 (23-240)||(10717325-10717542)


Alignment Details
Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 28591381 - 28591142
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  28591381 tctagcagtcttgtttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaa 28591282  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28591281 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcggatcggttcaggggtcaacatacctttcttgggagccccttggctcaaggatgg 28591182  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28591181 tttgtctttatccacaactaatcctatttttgagcctttg 28591142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 23060770 - 23060531
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  23060770 tctagcaaccttgtttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaa 23060671  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23060670 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcggatcggttcaggggtcaacatacctttcttgggagccccttggctcaaggatgg 23060571  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  23060570 tttgtttttatccacaactaatcctatttttgagcctttg 23060531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 240
Target Start/End: Complemental strand, 37840147 - 37839958
Alignment:
Q  51 tgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatc 150  Q
    |||||||||||||||||| ||| | ||||| ||||| |||||||||||  | || ||||||||||||||||||||||||||||| || | |||| | ||     
T  37840147 tgattttattgggtccaacattagacataatccaagttatgtttggcggagtatatttagtgcaaaaattgtggtgaaacagggcgcgcaatggtgtatg 37840048  T
Q  151 ggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatggtttgtctttatccacaactaatcctatttttgagcctttg 240  Q
    || ||||| |  ||||||||| | || || || |||||||| || |||||  ||||||| || | ||||||||| || ||||||||||||    
T  37840047 ggctcaggagctaacatacctcttttaggcgttccttggcttaaagatggcctgtctttgtcaataactaatccaatatttgagcctttg 37839958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 50634087 - 50634177
Alignment:
Q  50 ctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcatttttagtgcaaaaattgtggtgaaacagggtgcacg 140  Q
    |||||||||||||||  | ||||| |||||| | |||||||||||| ||  | || |||||| |||||| || ||||||||||||||||||    
T  50634087 ctgattttattgggtatagaattgtgcataatctaagctatgtttgacggagtatatttagtacaaaaactgaggtgaaacagggtgcacg 50634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 208; Significance: 1e-114; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 30303551 - 30303790
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30303551 tctagcagtcttgtttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaa 30303650  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| || ||||||||| |||||    
T  30303651 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgattgcggatcggttcaggggtcaacatacctttcttgggagccctttggctcaatgatgg 30303750  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  30303751 tttgtctttatccacaactaatcctatttttgagcctttg 30303790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 24869882 - 24869972
Alignment:
Q  14 tttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcat 104  Q
    |||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||| ||||||||| |||| ||| ||||    
T  24869882 tttgtcgattatttaaggctagttattttcctaattatgattttattgggtccaaaattggacataatccaagctatatttgacgaagcat 24869972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 31590 - 31631
Alignment:
Q  103 atttttagtgcaaaaattgtggtgaaacagggtgcacgatgg 144  Q
    ||||||||||| ||||| |||||||||||||| |||||||||    
T  31590 atttttagtgctaaaatggtggtgaaacagggggcacgatgg 31631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 12716130 - 12716089
Alignment:
Q  103 atttttagtgcaaaaattgtggtgaaacagggtgcacgatgg 144  Q
    ||||||||||| ||||| |||||||||||||||||| |||||    
T  12716130 atttttagtgctaaaatggtggtgaaacagggtgcaagatgg 12716089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 12777361 - 12777320
Alignment:
Q  103 atttttagtgcaaaaattgtggtgaaacagggtgcacgatgg 144  Q
    ||||||||||| ||||| |||||||||||||||||| |||||    
T  12777361 atttttagtgctaaaatggtggtgaaacagggtgcaagatgg 12777320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 204; Significance: 1e-111; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 25905772 - 25905533
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    |||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  25905772 tctagcaaacttgtttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaa 25905673  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  25905672 gcatttttagtgcaaaaattatggtgaaacagggtgcacgatggcggatcggttcaggggtcaacaaacctttcttgggagccccttggctcaaggatgg 25905573  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  25905572 tttgtctttatccacaactaatcctacttttgagcctttg 25905533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 32894702 - 32894934
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    ||||| |||||| |||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||     
T  32894702 tctagtagccttgtttgtcgattatttaaagctagatattttcctacttctgattttattgggtccaaaatcgggcataacccaagctatatttggcgaa 32894801  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    | |||||||| |||||||| ||||| |||||||||||| ||||||| || |||||||||| ||| ||||||||||| || | ||||||||||||||||||    
T  32894802 gtatttttagcgcaaaaatagtggtaaaacagggtgcaagatggcggattggttcaggggccaatatacctttcttaggcgccccttggctcaaggatgg 32894901  T
Q  201 tttgtctttatccacaactaatcctatttttga 233  Q
     || ||||| |||   |||||||||||||||||    
T  32894902 cttatctttttcctttactaatcctatttttga 32894934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 13107589 - 13107350
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    |||||||  ||| ||||||||| ||| |||| ||||||  ||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||  |     
T  13107589 tctagcaatcttgtttgtcgataattcaaggatagatatcttcctaagtctgattttattggatccaaaatttggcataacccaagctatgtttggtaaa 13107490  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||  ||||||||||| |||||||| |||||||| ||||| || |||||||||||||| | |||||| || || | ||||||||| | ||||||    
T  13107489 gcatttttaacgcaaaaattgtagtgaaacatggtgcacgttggcggattggttcaggggtcaatacaccttttttaggcgccccttggctaacggatgg 13107390  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
     |||||| ||||||||||||||| ||||||||||||||||    
T  13107389 cttgtctctatccacaactaatcatatttttgagcctttg 13107350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 26952868 - 26952629
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26952868 tctagcagtcttgtttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaa 26952769  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||  || |||| |||||||||||||||||||||||||| || ||||||||| |||||    
T  26952768 gcatttttagtgcaaaaattgtggtgaaacagggtgtacgattgctgattggtttaggggtcaacatacctttcttgggagccctttggctcaatgatgg 26952669  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26952668 tttgtctttatccacaactaatcctatttttgagcctttg 26952629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18177832 - 18178071
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18177832 tctagcagccttgtttgtcgattatttaaagctagatattttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaa 18177931  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    |||||||||| |||||||| ||||| ||  ||||| |||||||  | || |||||||||||||||||||||||||| || | | |||||||||||||||     
T  18177932 gcatttttagcgcaaaaatagtggtaaagaagggtacacgatgatggattggttcaggggtcaacatacctttcttaggtgcctcttggctcaaggatga 18178031  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
     |||||||||||||| |||||||||||| |||||||||||    
T  18178032 cttgtctttatccactactaatcctattgttgagcctttg 18178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21277814 - 21277575
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    ||||| |||||| |||||||||||||||| |||||||| ||||| | |||| |||||||||||||||||||||||||||| |||||||||||||| |||     
T  21277814 tctagtagccttgtttgtcgattatttaaagctagatattttcccacttcttattttattgggtccaaaattgggcataatccaagctatgtttgacgaa 21277715  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    | |||||||| |||||||| ||||| |||||||||||| ||||||  || |||||| ||| ||| ||||||||||| || | ||||||||||||||||||    
T  21277714 gtatttttagcgcaaaaatagtggtaaaacagggtgcaagatggcagattggttcaagggccaatatacctttcttaggcgccccttggctcaaggatgg 21277615  T
Q  201 tttgtctttatccacaactaatcctatttttgagcctttg 240  Q
     |||||||| |||||||||||||  ||||||||| |||||    
T  21277614 cttgtctttttccacaactaatctaatttttgagtctttg 21277575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 27876383 - 27876615
Alignment:
Q  1 tctagcagccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgag 100  Q
    ||||| |||||| |||||||||||||||| |||||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||     
T  27876383 tctagtagccttgtttgtcgattatttaaagctagatattttcttacttctgattttattgggtccaaaatcgggcataacccaagctatgtttggcgaa 27876482  T
Q  101 gcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatgg 200  Q
    | ||||||||  ||||||| ||||| |||||||||||| ||||||  || |||||||||| ||| ||||||||||| || | ||||||||||||||||||    
T  27876483 gtatttttagcacaaaaatagtggtaaaacagggtgcaagatggcagattggttcaggggccaatatacctttcttaggcgccccttggctcaaggatgg 27876582  T
Q  201 tttgtctttatccacaactaatcctatttttga 233  Q
     || ||||| ||||| |||||||||||||||||    
T  27876583 cttatctttttccactactaatcctatttttga 27876615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 240
Target Start/End: Original strand, 15231293 - 15231458
Alignment:
Q  74 ggcataacccaagctatgtttggcgaggcatttttagtgcaaaaattgtggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacataccttt 173  Q
    ||||||| ||||||||||||||| || | ||||||||||| ||||||||||||||||| ||| | |||||| |||| ||||  || || || ||||||||    
T  15231293 ggcataatccaagctatgtttggagaagtatttttagtgctaaaattgtggtgaaacaaggtacgcgatggagaataggttttggtgttaatataccttt 15231392  T
Q  174 cttgggagtcccttggctcaaggatggtttgtctttatccacaactaatcctatttttgagcctttg 240  Q
     || || |  |||||| | || ||||||||||||||||||||||||||||| |||||||||||||||    
T  15231393 -ttaggcgctccttggattaatgatggtttgtctttatccacaactaatccaatttttgagcctttg 15231458  T

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Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 1018140 - 1018041
Alignment:
Q  7 agccttatttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcattt 106  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1018140 agccttgtttgtcgattatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaagcattt 1018041  T

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Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 42435711 - 42435929
Alignment:
Q  22 ttatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcatttttagtgcaaaaattg 121  Q
    |||||||||||| |||| ||||||||||| ||||| |||||||| || |||||||||||  ||||||||||||||    |  |||||||||| |||||||    
T  42435711 ttatttaaggctggatattttcctaattccgatttcattgggtctaatattgggcataattcaagctatgtttggaagagtgtttttagtgccaaaattg 42435810  T
Q  122 tggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatggtttgtctttatccacaactaa 221  Q
    | || ||||||||||| || ||| | || ||||| |  |  || ||||||||  | || |  |||||||| ||||||| | |||||||||||||||||||    
T  42435811 ttgtaaaacagggtgcgcgttggtggataggttctgctgataatataccttttctaggcgctccttggctaaaggatgatatgtctttatccacaactaa 42435910  T
Q  222 tcctatttttgagcctttg 240  Q
     || |||||||||||||||    
T  42435911 cccaatttttgagcctttg 42435929  T

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Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 9815617 - 9815400
Alignment:
Q  23 tatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcatttttagtgcaaaaattgt 122  Q
    |||||||||||||||| |||||||||||| |||| ||| | || || |||||||||||  |||||||||||||| |  | || |||||||| ||||||||    
T  9815617 tatttaaggctagatattttcctaattctaatttcattagttctaatattgggcataattcaagctatgtttggaggagtatctttagtgccaaaattgt 9815518  T
Q  123 ggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatggtttgtctttatccacaactaat 222  Q
    |||||||||||| || || ||| |||| ||||| |  |  || |||||||| || || |  |||||||| ||||||| ||||||||||||||||||||||    
T  9815517 ggtgaaacagggcgcgcgttggagaataggttctgatgctaatataccttttttaggcgctccttggctaaaggatgatttgtctttatccacaactaat 9815418  T
Q  223 cctatttttgagcctttg 240  Q
    || |||||||||||||||    
T  9815417 ccaatttttgagcctttg 9815400  T

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Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 10717542 - 10717325
Alignment:
Q  23 tatttaaggctagatactttcctaattctgattttattgggtccaaaattgggcataacccaagctatgtttggcgaggcatttttagtgcaaaaattgt 122  Q
    |||||||||||||||| |||||||||||| |||| ||| | || || |||||||||||  |||||||||||||| |  | || |||||||| ||||||||    
T  10717542 tatttaaggctagatattttcctaattctaatttcattagttctaatattgggcataattcaagctatgtttggaggagtatctttagtgccaaaattgt 10717443  T
Q  123 ggtgaaacagggtgcacgatggcgaatcggttcaggggtcaacatacctttcttgggagtcccttggctcaaggatggtttgtctttatccacaactaat 222  Q
    |||||||||||| || || ||| |||| ||||| |  |  || |||||||| || || |  |||||||| ||||||| ||||||||||||||||||||||    
T  10717442 ggtgaaacagggcgcgcgttggagaataggttctgatgctaatataccttttttaggcgctccttggctaaaggatgatttgtctttatccacaactaat 10717343  T
Q  223 cctatttttgagcctttg 240  Q
    || |||||||||||||||    
T  10717342 ccaatttttgagcctttg 10717325  T

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