View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10818_low_56 (Length: 227)
Name: NF10818_low_56
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10818_low_56 |
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Alignment Details
Target: chr2 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 22 - 210
Target Start/End: Complemental strand, 37168985 - 37168796
Alignment:
| Q |
22 |
gttaagatcatttaactatattaaacttgatgtgtaatttggaccgtcttttctacaacaacaaatcaaaatcctatatgtgtatattgttt-gacaaca |
120 |
Q |
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| T |
37168985 |
gttaagatcatttaactatattaaacttgatgtgtaatttggaccgtcttttctacaacaacaaatcaaaatcctatatgtgtatattgttttgacaaca |
37168886 |
T |
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| Q |
121 |
agattttcataagcgttgaggattagattaagttaatgaccaatcatgagagtgggcgttcaagacatccaattgggtatggctcacatg |
210 |
Q |
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| T |
37168885 |
agattttcataagcgttgaggattagattaagttaatgaccaatcatgagagtgggcgttcaagacatccaattgggtatggctcacatg |
37168796 |
T |
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