View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10818_low_63 (Length: 209)
Name: NF10818_low_63
Description: NF10818
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10818_low_63 |
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Alignment Details
Target: chr8 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 14 - 181
Target Start/End: Complemental strand, 3916273 - 3916106
Alignment:
| Q |
14 |
caaaggatggaagtgtttacgaacccgaagggtatggaggttttccgttaccaccgccgccgacgtttataacttgcttgttttggtataaactttgttt |
113 |
Q |
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| T |
3916273 |
caaaggatggaagtgtttacgaacccgaagggtatggaggttttccgttaccaccgccgccgacgtttataacttgcttgttttggtataaactttgttt |
3916174 |
T |
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| Q |
114 |
gttttggcctttgttttgccctgattatcaaaagatgtgtctttattacaaagccacagaagaagaag |
181 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3916173 |
gttttggcctttgttttgtcctgattatcaaaagatgtgtctttattacaaagccacagaagaagaag |
3916106 |
T |
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