View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10819_low_20 (Length: 238)
Name: NF10819_low_20
Description: NF10819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10819_low_20 |
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Alignment Details
Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 35093041 - 35093175
Alignment:
| Q |
1 |
attcattatttacattaacctcttggtctcctcaactctccaatatactaacctcacctctttaattacactgggaattaaataaaacattgaaactaac |
100 |
Q |
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| T |
35093041 |
attcattatttacattaagctcttgttctcctcaactctccaatatactaacctcacctctttaattacactgggaat----taaaacattgaaactaac |
35093136 |
T |
|
| Q |
101 |
ccagcaacgtaatagagata--tgcatagatatgaacac |
137 |
Q |
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|||||||||||||||||||| ||||||||||||||||| |
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| T |
35093137 |
ccagcaacgtaatagagatatttgcatagatatgaacac |
35093175 |
T |
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