View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10819_low_3 (Length: 427)

Name: NF10819_low_3
Description: NF10819
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10819_low_3
NF10819_low_3
[»] chr6 (42 HSPs)
chr6 (18-225)||(4576847-4577054)
chr6 (313-415)||(20726879-20726982)
chr6 (314-415)||(33464422-33464524)
chr6 (313-415)||(3347535-3347638)
chr6 (313-415)||(9459655-9459758)
chr6 (313-415)||(21893547-21893650)
chr6 (313-415)||(26704351-26704454)
chr6 (313-415)||(26946888-26946991)
chr6 (313-412)||(16307023-16307123)
chr6 (313-415)||(6086611-6086714)
chr6 (313-415)||(11167332-11167435)
chr6 (314-415)||(53001-53103)
chr6 (314-415)||(1153686-1153788)
chr6 (313-415)||(28199520-28199622)
chr6 (313-415)||(2837637-2837740)
chr6 (313-415)||(18613630-18613733)
chr6 (313-415)||(30691943-30692046)
chr6 (323-415)||(17261085-17261178)
chr6 (313-411)||(3955782-3955881)
chr6 (313-415)||(30698941-30699044)
chr6 (313-415)||(34887304-34887407)
chr6 (313-406)||(35198375-35198469)
chr6 (221-270)||(3347686-3347735)
chr6 (220-272)||(9459557-9459609)
chr6 (224-275)||(2837543-2837594)
chr6 (47-94)||(4562662-4562709)
chr6 (224-275)||(6086757-6086808)
chr6 (224-270)||(52834-52880)
chr6 (222-275)||(18613534-18613587)
chr6 (313-383)||(52928-52999)
chr6 (228-275)||(17261231-17261278)
chr6 (220-275)||(26947034-26947089)
chr6 (220-275)||(30691845-30691900)
chr6 (116-150)||(4562624-4562658)
chr6 (225-275)||(20726790-20726840)
chr6 (215-268)||(28199674-28199727)
chr6 (227-275)||(3955924-3955972)
chr6 (224-260)||(11167238-11167274)
chr6 (223-275)||(33463698-33463750)
chr6 (224-270)||(16307171-16307217)
chr6 (224-270)||(35198282-35198328)
chr6 (225-270)||(26704502-26704547)
[»] chr7 (60 HSPs)
chr7 (313-415)||(3511414-3511517)
chr7 (313-415)||(24792334-24792437)
chr7 (313-415)||(25748578-25748681)
chr7 (313-415)||(42964998-42965101)
chr7 (314-415)||(20346580-20346682)
chr7 (313-412)||(7164275-7164375)
chr7 (313-415)||(42204246-42204349)
chr7 (313-415)||(42673552-42673655)
chr7 (314-415)||(933377-933479)
chr7 (314-415)||(5280952-5281054)
chr7 (313-415)||(4477323-4477426)
chr7 (313-415)||(12101180-12101283)
chr7 (313-415)||(15656003-15656106)
chr7 (313-415)||(30181026-30181129)
chr7 (313-415)||(33359092-33359195)
chr7 (313-415)||(43067975-43068078)
chr7 (314-415)||(6394843-6394945)
chr7 (314-415)||(9452682-9452784)
chr7 (314-415)||(12097592-12097694)
chr7 (313-415)||(1803117-1803220)
chr7 (314-412)||(22649699-22649798)
chr7 (313-415)||(36890832-36890935)
chr7 (314-415)||(38866636-38866738)
chr7 (314-415)||(48865725-48865827)
chr7 (314-408)||(8630758-8630853)
chr7 (313-415)||(17753691-17753794)
chr7 (313-411)||(32041633-32041732)
chr7 (313-410)||(4347364-4347462)
chr7 (314-415)||(16894509-16894611)
chr7 (313-415)||(43156804-43156907)
chr7 (354-415)||(43021582-43021643)
chr7 (322-412)||(46134309-46134400)
chr7 (317-415)||(46891341-46891440)
chr7 (218-269)||(15655903-15655954)
chr7 (313-415)||(33846531-33846629)
chr7 (220-270)||(42204147-42204197)
chr7 (222-275)||(6394746-6394799)
chr7 (223-275)||(30181172-30181224)
chr7 (222-270)||(43021729-43021777)
chr7 (224-275)||(33846672-33846723)
chr7 (219-273)||(5280852-5280906)
chr7 (220-270)||(33359243-33359293)
chr7 (221-275)||(42965144-42965198)
chr7 (222-275)||(19828265-19828318)
chr7 (218-275)||(22649842-22649899)
chr7 (219-275)||(4347265-4347321)
chr7 (226-270)||(20346487-20346531)
chr7 (232-275)||(43156718-43156761)
chr7 (220-270)||(3511316-3511366)
chr7 (229-275)||(4477469-4477515)
chr7 (224-270)||(32041539-32041585)
chr7 (221-270)||(933279-933328)
chr7 (228-273)||(9452591-9452636)
chr7 (220-257)||(16894663-16894700)
chr7 (222-275)||(43068121-43068174)
chr7 (227-275)||(7164184-7164232)
chr7 (223-275)||(12101326-12101378)
chr7 (222-270)||(37704975-37705023)
chr7 (230-275)||(1803029-1803074)
chr7 (220-260)||(37005974-37006014)
[»] chr4 (95 HSPs)
chr4 (313-415)||(50055101-50055204)
chr4 (313-415)||(28032712-28032815)
chr4 (314-412)||(1756767-1756866)
chr4 (313-415)||(8591092-8591195)
chr4 (313-423)||(11639570-11639681)
chr4 (313-415)||(19913630-19913733)
chr4 (313-415)||(35490773-35490876)
chr4 (313-415)||(53717464-53717567)
chr4 (313-415)||(54189635-54189738)
chr4 (314-415)||(15241028-15241130)
chr4 (314-423)||(23704201-23704311)
chr4 (314-415)||(45424534-45424636)
chr4 (314-415)||(19164973-19165073)
chr4 (314-413)||(38055248-38055348)
chr4 (313-412)||(40680041-40680141)
chr4 (313-415)||(1617174-1617277)
chr4 (313-415)||(2481408-2481511)
chr4 (313-415)||(23269046-23269149)
chr4 (313-415)||(27488648-27488751)
chr4 (313-415)||(27583632-27583735)
chr4 (313-415)||(33703931-33704034)
chr4 (313-415)||(40428720-40428823)
chr4 (313-415)||(43289960-43290063)
chr4 (313-415)||(44784917-44785020)
chr4 (317-415)||(47632129-47632228)
chr4 (313-415)||(52139293-52139396)
chr4 (314-415)||(27536104-27536206)
chr4 (314-415)||(31969772-31969874)
chr4 (313-415)||(6611360-6611463)
chr4 (337-415)||(6688627-6688706)
chr4 (313-411)||(23776463-23776562)
chr4 (313-415)||(37968757-37968860)
chr4 (313-415)||(48909936-48910039)
chr4 (313-415)||(50353891-50353994)
chr4 (313-415)||(53353149-53353256)
chr4 (313-415)||(54412718-54412821)
chr4 (314-415)||(20877138-20877240)
chr4 (314-415)||(37464812-37464914)
chr4 (314-415)||(44379187-44379289)
chr4 (313-415)||(14987882-14987985)
chr4 (313-415)||(15669273-15669376)
chr4 (313-415)||(16700871-16700974)
chr4 (314-415)||(44375936-44376038)
chr4 (313-415)||(30171670-30171773)
chr4 (313-415)||(30423565-30423667)
chr4 (313-415)||(53875747-53875850)
chr4 (322-415)||(8932178-8932272)
chr4 (314-415)||(16703912-16704014)
chr4 (341-415)||(53408137-53408213)
chr4 (341-423)||(55344817-55344900)
chr4 (366-415)||(23261886-23261935)
chr4 (226-270)||(47632032-47632076)
chr4 (314-393)||(28360521-28360602)
chr4 (374-415)||(9595902-9595943)
chr4 (217-270)||(30423715-30423768)
chr4 (314-411)||(38071327-38071422)
chr4 (223-275)||(44785063-44785115)
chr4 (224-275)||(6611506-6611557)
chr4 (220-275)||(20877039-20877094)
chr4 (224-275)||(50053439-50053490)
chr4 (224-275)||(50055247-50055298)
chr4 (223-270)||(54189540-54189587)
chr4 (224-270)||(2481559-2481605)
chr4 (225-275)||(6688767-6688817)
chr4 (220-270)||(8932329-8932379)
chr4 (217-275)||(16700770-16700828)
chr4 (225-275)||(19913776-19913826)
chr4 (225-275)||(23776605-23776655)
chr4 (222-267)||(14987786-14987831)
chr4 (221-270)||(23265908-23265957)
chr4 (224-273)||(37464717-37464766)
chr4 (378-415)||(50055301-50055338)
chr4 (227-275)||(54412627-54412675)
chr4 (227-274)||(44375844-44375891)
chr4 (224-270)||(9595986-9596031)
chr4 (224-270)||(15669179-15669225)
chr4 (229-275)||(19165118-19165164)
chr4 (225-275)||(38055154-38055204)
chr4 (361-415)||(48748197-48748251)
chr4 (218-260)||(53717625-53717667)
chr4 (228-273)||(1617084-1617129)
chr4 (222-275)||(50353795-50353848)
chr4 (227-275)||(1756910-1756958)
chr4 (222-270)||(45424685-45424733)
chr4 (313-364)||(50053533-50053585)
chr4 (224-275)||(48909842-48909893)
chr4 (224-270)||(15241179-15241225)
chr4 (222-252)||(53353049-53353079)
chr4 (224-257)||(27536264-27536297)
chr4 (226-270)||(11639729-11639773)
chr4 (222-270)||(23704360-23704408)
chr4 (229-269)||(30171581-30171621)
chr4 (228-268)||(35490926-35490966)
chr4 (226-270)||(40428871-40428915)
chr4 (228-272)||(52139203-52139247)
[»] chr5 (45 HSPs)
chr5 (314-423)||(4121031-4121141)
chr5 (313-415)||(16069446-16069549)
chr5 (313-415)||(16737459-16737562)
chr5 (314-415)||(1579130-1579232)
chr5 (314-415)||(1605583-1605685)
chr5 (314-415)||(31883238-31883340)
chr5 (313-415)||(3386498-3386601)
chr5 (313-411)||(9008073-9008172)
chr5 (314-412)||(27420952-27421051)
chr5 (313-412)||(33991233-33991333)
chr5 (313-415)||(1165613-1165716)
chr5 (313-415)||(3921674-3921777)
chr5 (313-415)||(27679181-27679284)
chr5 (313-415)||(33491208-33491311)
chr5 (313-411)||(38598466-38598565)
chr5 (313-415)||(19358619-19358722)
chr5 (313-415)||(24105683-24105786)
chr5 (313-415)||(27025049-27025152)
chr5 (314-411)||(5203066-5203164)
chr5 (314-415)||(8374351-8374452)
chr5 (315-415)||(20992158-20992259)
chr5 (313-415)||(31410569-31410672)
chr5 (313-412)||(35782659-35782759)
chr5 (313-412)||(26602957-26603057)
chr5 (220-275)||(9008215-9008270)
chr5 (360-415)||(35420436-35420491)
chr5 (224-270)||(27679332-27679378)
chr5 (224-270)||(33991139-33991185)
chr5 (220-270)||(35782807-35782857)
chr5 (222-275)||(24105829-24105882)
chr5 (222-275)||(27420855-27420908)
chr5 (222-270)||(20992309-20992357)
chr5 (222-270)||(33491359-33491407)
chr5 (224-275)||(1579035-1579086)
chr5 (224-275)||(1605729-1605780)
chr5 (231-270)||(3386649-3386688)
chr5 (223-270)||(31883142-31883189)
chr5 (221-270)||(19358522-19358571)
chr5 (223-275)||(4120935-4120987)
chr5 (220-275)||(3921576-3921631)
chr5 (220-259)||(20992459-20992498)
chr5 (225-259)||(5202972-5203006)
chr5 (224-270)||(8374501-8374547)
chr5 (222-275)||(16069350-16069403)
chr5 (225-257)||(26603108-26603140)
[»] scaffold0167 (2 HSPs)
scaffold0167 (313-415)||(22963-23066)
scaffold0167 (225-270)||(23114-23159)
[»] chr8 (62 HSPs)
chr8 (313-415)||(14422795-14422898)
chr8 (313-415)||(39206678-39206781)
chr8 (314-415)||(144487-144589)
chr8 (314-415)||(33278493-33278595)
chr8 (313-415)||(2042536-2042639)
chr8 (313-415)||(4035939-4036042)
chr8 (313-415)||(22260642-22260745)
chr8 (313-415)||(29938153-29938256)
chr8 (314-415)||(24113178-24113280)
chr8 (313-415)||(6144285-6144388)
chr8 (314-412)||(10836770-10836869)
chr8 (313-415)||(13110496-13110599)
chr8 (313-415)||(18594629-18594732)
chr8 (314-415)||(7774857-7774959)
chr8 (314-415)||(34679469-34679571)
chr8 (314-415)||(38167167-38167269)
chr8 (313-415)||(44804956-44805059)
chr8 (313-412)||(35118046-35118146)
chr8 (313-412)||(41575605-41575705)
chr8 (313-415)||(9807352-9807455)
chr8 (313-415)||(34998908-34999011)
chr8 (314-415)||(7791504-7791606)
chr8 (314-415)||(39218870-39218972)
chr8 (313-412)||(36491249-36491349)
chr8 (314-412)||(7812088-7812187)
chr8 (314-415)||(28639375-28639475)
chr8 (313-412)||(42571685-42571783)
chr8 (314-415)||(34842377-34842479)
chr8 (313-415)||(66191-66295)
chr8 (314-415)||(5320657-5320759)
chr8 (225-270)||(33278399-33278444)
chr8 (223-275)||(18594534-18594586)
chr8 (224-275)||(39206584-39206635)
chr8 (225-275)||(35118189-35118239)
chr8 (225-275)||(38167313-38167363)
chr8 (224-270)||(39218775-39218821)
chr8 (226-275)||(34842523-34842572)
chr8 (222-275)||(40118010-40118063)
chr8 (222-270)||(26783896-26783944)
chr8 (224-275)||(10836913-10836964)
chr8 (228-275)||(13110406-13110453)
chr8 (220-275)||(14422697-14422752)
chr8 (224-275)||(22260788-22260839)
chr8 (224-275)||(24113324-24113375)
chr8 (314-376)||(33287076-33287139)
chr8 (225-267)||(29938060-29938102)
chr8 (229-275)||(41575516-41575562)
chr8 (222-275)||(6144431-6144484)
chr8 (227-260)||(7791412-7791445)
chr8 (230-270)||(2042687-2042727)
chr8 (224-260)||(7811993-7812029)
chr8 (220-275)||(4035841-4035896)
chr8 (225-260)||(5320563-5320598)
chr8 (228-275)||(8021721-8021768)
chr8 (224-275)||(33287183-33287234)
chr8 (229-275)||(66338-66384)
chr8 (229-275)||(144397-144443)
chr8 (314-411)||(8021812-8021902)
chr8 (222-270)||(2322175-2322223)
chr8 (231-275)||(34679615-34679659)
chr8 (313-376)||(40117903-40117967)
chr8 (230-270)||(42571598-42571638)
[»] chr2 (41 HSPs)
chr2 (313-415)||(18806896-18806999)
chr2 (313-412)||(26323201-26323301)
chr2 (313-415)||(33906059-33906162)
chr2 (314-415)||(19383947-19384049)
chr2 (313-412)||(3873259-3873359)
chr2 (313-415)||(851087-851190)
chr2 (313-415)||(2178781-2178884)
chr2 (313-415)||(5733489-5733592)
chr2 (313-415)||(31517227-31517330)
chr2 (315-415)||(4016131-4016232)
chr2 (313-412)||(4232157-4232257)
chr2 (314-415)||(42937810-42937913)
chr2 (313-415)||(39635542-39635645)
chr2 (314-407)||(1108370-1108464)
chr2 (314-415)||(30270691-30270793)
chr2 (313-413)||(16588790-16588891)
chr2 (313-415)||(16066306-16066409)
chr2 (314-415)||(6174840-6174942)
chr2 (313-415)||(1482915-1483018)
chr2 (313-412)||(19901153-19901253)
chr2 (313-415)||(28329851-28329952)
chr2 (314-415)||(44947561-44947656)
chr2 (313-412)||(429906-430006)
chr2 (217-270)||(19901300-19901353)
chr2 (222-275)||(26323344-26323397)
chr2 (224-275)||(39635448-39635499)
chr2 (224-273)||(2178929-2178978)
chr2 (227-275)||(30420325-30420373)
chr2 (219-270)||(4232305-4232356)
chr2 (224-270)||(16588939-16588985)
chr2 (225-275)||(31517373-31517423)
chr2 (222-275)||(1108274-1108326)
chr2 (225-270)||(3873407-3873452)
chr2 (224-260)||(6175001-6175037)
chr2 (379-415)||(30420191-30420227)
chr2 (224-270)||(18807047-18807093)
chr2 (228-270)||(28330000-28330042)
chr2 (224-270)||(42446732-42446778)
chr2 (229-270)||(1483065-1483106)
chr2 (228-260)||(4016039-4016071)
chr2 (224-260)||(42937715-42937751)
[»] chr1 (77 HSPs)
chr1 (313-415)||(19715173-19715276)
chr1 (314-415)||(33510575-33510677)
chr1 (313-423)||(1168593-1168704)
chr1 (313-415)||(12682910-12683013)
chr1 (313-415)||(16052186-16052289)
chr1 (313-415)||(25897464-25897567)
chr1 (313-415)||(39260358-39260461)
chr1 (313-415)||(52696881-52696984)
chr1 (314-415)||(7145298-7145400)
chr1 (313-413)||(38829159-38829260)
chr1 (313-415)||(5215475-5215578)
chr1 (313-415)||(17591778-17591881)
chr1 (313-415)||(20089561-20089664)
chr1 (313-415)||(26580282-26580385)
chr1 (313-415)||(26663348-26663451)
chr1 (313-415)||(29078606-29078709)
chr1 (313-415)||(42370807-42370910)
chr1 (313-415)||(43905744-43905847)
chr1 (313-415)||(46761056-46761159)
chr1 (313-415)||(51359229-51359332)
chr1 (314-415)||(2347747-2347850)
chr1 (313-412)||(13996738-13996838)
chr1 (313-415)||(1170456-1170559)
chr1 (313-415)||(1940759-1940862)
chr1 (317-415)||(15717878-15717977)
chr1 (313-415)||(17587517-17587620)
chr1 (313-411)||(40092581-40092680)
chr1 (313-415)||(52753159-52753262)
chr1 (314-411)||(41928511-41928609)
chr1 (313-423)||(8079713-8079824)
chr1 (314-415)||(29288240-29288340)
chr1 (313-415)||(32671669-32671772)
chr1 (322-415)||(970536-970630)
chr1 (314-415)||(8120960-8121062)
chr1 (338-415)||(15554164-15554242)
chr1 (314-415)||(40149554-40149656)
chr1 (316-412)||(23498553-23498650)
chr1 (313-409)||(49146262-49146359)
chr1 (313-411)||(15203202-15203301)
chr1 (314-415)||(6765550-6765652)
chr1 (313-415)||(2473812-2473915)
chr1 (313-415)||(46409525-46409630)
chr1 (222-270)||(16052090-16052138)
chr1 (220-275)||(20089463-20089518)
chr1 (224-275)||(26580428-26580479)
chr1 (356-415)||(38171953-38172012)
chr1 (217-270)||(6765448-6765501)
chr1 (222-275)||(32671573-32671626)
chr1 (224-275)||(1168499-1168550)
chr1 (220-275)||(26663250-26663305)
chr1 (314-388)||(29695767-29695842)
chr1 (224-275)||(39260504-39260555)
chr1 (224-275)||(52753305-52753356)
chr1 (224-270)||(41928658-41928704)
chr1 (229-270)||(8120870-8120911)
chr1 (221-270)||(46409428-46409477)
chr1 (225-270)||(52696788-52696833)
chr1 (224-275)||(1940905-1940956)
chr1 (227-270)||(5215384-5215427)
chr1 (220-275)||(12682812-12682867)
chr1 (224-275)||(29288145-29288196)
chr1 (225-275)||(970684-970734)
chr1 (224-270)||(1170607-1170653)
chr1 (228-270)||(8079872-8079914)
chr1 (231-275)||(29078519-29078563)
chr1 (219-275)||(33510475-33510531)
chr1 (224-275)||(2347652-2347703)
chr1 (220-259)||(5675097-5675136)
chr1 (224-275)||(25897370-25897421)
chr1 (223-270)||(43905649-43905696)
chr1 (220-270)||(38829061-38829111)
chr1 (225-275)||(42370953-42371003)
chr1 (225-267)||(51359382-51359424)
chr1 (222-275)||(13996881-13996934)
chr1 (226-275)||(29695673-29695722)
chr1 (222-267)||(49146166-49146211)
chr1 (219-259)||(15717776-15717816)
[»] chr3 (65 HSPs)
chr3 (314-415)||(8042695-8042797)
chr3 (313-412)||(38856180-38856280)
chr3 (313-415)||(22174988-22175091)
chr3 (313-415)||(54870172-54870275)
chr3 (314-415)||(32244208-32244310)
chr3 (314-415)||(46452160-46452262)
chr3 (314-415)||(48925001-48925103)
chr3 (313-412)||(15520143-15520243)
chr3 (313-412)||(42307906-42308006)
chr3 (313-415)||(15520723-15520826)
chr3 (313-415)||(20842346-20842449)
chr3 (313-415)||(25494283-25494386)
chr3 (313-411)||(25999475-25999574)
chr3 (313-415)||(29445575-29445678)
chr3 (313-415)||(35226534-35226637)
chr3 (313-415)||(37698141-37698244)
chr3 (313-415)||(38934032-38934135)
chr3 (313-415)||(50529016-50529119)
chr3 (314-415)||(32359347-32359449)
chr3 (313-415)||(54534326-54534427)
chr3 (313-412)||(44609334-44609434)
chr3 (313-415)||(20699236-20699339)
chr3 (313-415)||(21581129-21581232)
chr3 (313-415)||(24835697-24835800)
chr3 (313-415)||(53028304-53028407)
chr3 (314-415)||(42104969-42105071)
chr3 (313-417)||(34700428-34700533)
chr3 (314-412)||(12117659-12117758)
chr3 (345-423)||(13696913-13696991)
chr3 (313-414)||(16354433-16354535)
chr3 (340-415)||(24366143-24366219)
chr3 (313-415)||(44688848-44688950)
chr3 (314-415)||(2895273-2895379)
chr3 (313-409)||(26122901-26122998)
chr3 (219-275)||(12117802-12117858)
chr3 (220-275)||(15520286-15520341)
chr3 (222-275)||(42308049-42308102)
chr3 (224-275)||(37698287-37698338)
chr3 (219-270)||(50528917-50528968)
chr3 (224-275)||(54534470-54534521)
chr3 (224-270)||(22175139-22175185)
chr3 (220-270)||(25999377-25999427)
chr3 (222-272)||(32359250-32359300)
chr3 (224-270)||(54870323-54870369)
chr3 (217-270)||(8042593-8042646)
chr3 (221-270)||(32244110-32244159)
chr3 (226-270)||(20699144-20699188)
chr3 (222-270)||(20842497-20842545)
chr3 (231-275)||(50529917-50529961)
chr3 (216-275)||(25494429-25494488)
chr3 (224-275)||(38933939-38933989)
chr3 (231-270)||(44609482-44609521)
chr3 (224-275)||(53028218-53028269)
chr3 (224-270)||(15520629-15520675)
chr3 (225-275)||(26122808-26122858)
chr3 (313-377)||(35643304-35643369)
chr3 (379-412)||(50528883-50528916)
chr3 (224-260)||(29445481-29445517)
chr3 (224-272)||(35226440-35226488)
chr3 (226-270)||(35643212-35643256)
chr3 (227-275)||(38856089-38856137)
chr3 (219-270)||(49128037-49128088)
chr3 (361-415)||(12916042-12916096)
chr3 (231-275)||(21581042-21581086)
chr3 (222-270)||(24366083-24366131)
[»] scaffold0920 (2 HSPs)
scaffold0920 (313-423)||(3800-3911)
scaffold0920 (226-270)||(3708-3752)
[»] scaffold1777 (1 HSPs)
scaffold1777 (313-415)||(18-121)
[»] scaffold0012 (2 HSPs)
scaffold0012 (313-415)||(36795-36898)
scaffold0012 (224-275)||(36701-36752)
[»] scaffold0172 (2 HSPs)
scaffold0172 (314-415)||(10329-10431)
scaffold0172 (222-270)||(10232-10280)
[»] scaffold0038 (2 HSPs)
scaffold0038 (313-415)||(18-120)
scaffold0038 (215-268)||(172-225)
[»] scaffold0018 (2 HSPs)
scaffold0018 (313-415)||(145257-145360)
scaffold0018 (228-275)||(145403-145450)
[»] scaffold0482 (2 HSPs)
scaffold0482 (314-415)||(307-409)
scaffold0482 (227-260)||(468-501)
[»] scaffold2089 (1 HSPs)
scaffold2089 (224-252)||(1066-1094)


Alignment Details
Target: chr6 (Bit Score: 167; Significance: 3e-89; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 225
Target Start/End: Complemental strand, 4577054 - 4576847
Alignment:
Q  18 aaaacacccttaattaacactattaaaagaatagactggcaagtctgtacccgtctgaacaccattgtgtgtatataaaatcagtccccaccacagacag 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  4577054 aaaacacccttaattaacactattaaaagaatagactggcaagtctgttcccgtctgaacaccattgtctgtatataaaatcagtccccaccacagaaag 4576955  T
Q  118 tggtctcctttcaacatgcagacgttgctttcgttcaccacgtcaatttgttgcacatgttggannnnnnnctttgacaagtccaaattggatttttatt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||    
T  4576954 tggtctcctttcaacatgcagacgttgctttcgttcaccacgtcaatttgttgcacatgttggatttttttctttgtcaagtccaaattggatttttatt 4576855  T
Q  218 atattaag 225  Q
     |||||||    
T  4576854 gtattaag 4576847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 20726879 - 20726982
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20726879 cttatcatagtttcataagctgcttatgccatattttaataagcctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 20726978  T
Q  412 cctt 415  Q
    ||||    
T  20726979 cctt 20726982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 33464422 - 33464524
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33464422 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 33464521  T
Q  413 ctt 415  Q
    |||    
T  33464522 ctt 33464524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 3347638 - 3347535
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  3347638 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 3347539  T
Q  412 cctt 415  Q
    ||||    
T  3347538 cctt 3347535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 9459655 - 9459758
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  9459655 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtatcct 9459754  T
Q  412 cctt 415  Q
    ||||    
T  9459755 cctt 9459758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 21893547 - 21893650
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21893547 cttatcatagtttcataagctgcttatgccatattttaataagcctaatttttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 21893646  T
Q  412 cctt 415  Q
    ||||    
T  21893647 cctt 21893650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 26704454 - 26704351
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  26704454 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 26704355  T
Q  412 cctt 415  Q
    ||||    
T  26704354 cctt 26704351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 26946991 - 26946888
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26946991 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 26946892  T
Q  412 cctt 415  Q
    ||||    
T  26946891 cctt 26946888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 16307123 - 16307023
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16307123 cttatcatagtttcataagctgcttatgccatattttaataagcataaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 16307024  T
Q  412 c 412  Q
    |    
T  16307023 c 16307023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 6086714 - 6086611
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  6086714 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 6086615  T
Q  412 cctt 415  Q
    ||||    
T  6086614 cctt 6086611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 11167332 - 11167435
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  11167332 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttacccaccggcttaacaaggagcttatgaatttatgtaacct 11167431  T
Q  412 cctt 415  Q
    ||||    
T  11167432 cctt 11167435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 53001 - 53103
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  53001 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacctc 53100  T
Q  413 ctt 415  Q
    |||    
T  53101 ctt 53103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 1153686 - 1153788
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||    
T  1153686 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggtgcttatgtatttatgtaacctc 1153785  T
Q  413 ctt 415  Q
    |||    
T  1153786 ctt 1153788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 28199622 - 28199520
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||| |||||||| | ||| |||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28199622 cttatcatagtttcatatgctgcttatgccattttcaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 28199523  T
Q  413 ctt 415  Q
    |||    
T  28199522 ctt 28199520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 2837637 - 2837740
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| ||||||| || |||  ||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  2837637 cttatcatagtttcatgagctgctcatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 2837736  T
Q  412 cctt 415  Q
    ||||    
T  2837737 cctt 2837740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 18613630 - 18613733
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| ||| |||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  18613630 cttatcatagttccataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 18613729  T
Q  412 cctt 415  Q
    ||||    
T  18613730 cctt 18613733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 30691943 - 30692046
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| || | ||||||||||||||||||||||||||||||||    
T  30691943 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccatctgacttaacaaggagcttatgaatttatgtaacct 30692042  T
Q  412 cctt 415  Q
    ||||    
T  30692043 cctt 30692046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 323 - 415
Target Start/End: Complemental strand, 17261178 - 17261085
Alignment:
Q  323 tttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||| ||| ||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17261178 tttcataagctgcttatgctatattttaataagcctaaattttcagcttaccctccggcttaacaaggaacttatgaatttatgtaacctcctt 17261085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 3955881 - 3955782
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| ||||| |||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  3955881 cttatcatagtttcataaactgcttatgctatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 3955782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 30699044 - 30698941
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||| || || ||| |||||||||||||| |||| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||    
T  30699044 cttatcatagttttattagctgcttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaatgagcttatgaatttatgtaacct 30698945  T
Q  412 cctt 415  Q
    ||||    
T  30698944 cctt 30698941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 34887407 - 34887304
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||    
T  34887407 cttatcatagtttcataagctgtttatgccatatttcaataagcctaaattttcagcttaccctccggcttaacaaggagctaatgaatttatgtgacct 34887308  T
Q  412 cctt 415  Q
    ||||    
T  34887307 cctt 34887304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 406
Target Start/End: Original strand, 35198375 - 35198469
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgt 406  Q
    |||||||| |||||||||| ||| |||||||||||| | |||| ||||||||| || |||| ||||||||||||||||| |||||||||||||||    
T  35198375 cttatcatagtttcataagctgcttatgccatatttcaataagcctaaattttcagtttactctccggcttaacaaggaacttatgaatttatgt 35198469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 3347735 - 3347686
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3347735 ttaaggccccgtttggattggcttattttgagcttatgtgggcttatcta 3347686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 220 - 272
Target Start/End: Original strand, 9459557 - 9459609
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctatt 272  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||    
T  9459557 attagggccccgtttggattggcttattttgagtttatgtgagcttatctatt 9459609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 2837543 - 2837594
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  2837543 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 2837594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 94
Target Start/End: Complemental strand, 4562709 - 4562662
Alignment:
Q  47 aatagactggcaagtctgtacccgtctgaacaccattgtgtgtatata 94  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||    
T  4562709 aatagattggcaagtctgtacccgtctgaacaccattgtgtgtgtata 4562662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 6086808 - 6086757
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  6086808 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 6086757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 52834 - 52880
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  52834 aggccccgtttggattggcttattttgagcttatgtgggcttatcta 52880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 18613534 - 18613587
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||||    
T  18613534 taaggccccgtttggattgacttattttgagcttatgcggacttatctactccc 18613587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 52928 - 52999
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggctta 383  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||    
T  52928 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggctta 52999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 17261278 - 17261231
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  17261278 cccgtttggattggcttattttgagcttatgtgggcttatctactccc 17261231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 26947089 - 26947034
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| |||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  26947089 attagggccccgtttggattggcttattttgagcttatatgggcttatctactccc 26947034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 30691845 - 30691900
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| |||| ||||||||||||||||||||||| |||||||| |||||||| ||||    
T  30691845 attagggcctcgtttggattggcttattttgagcttatgtgggcttatctactccc 30691900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 150
Target Start/End: Complemental strand, 4562658 - 4562624
Alignment:
Q  116 agtggtctcctttcaacatgcagacgttgctttcg 150  Q
    |||||||||||||||||||||||||||||||||||    
T  4562658 agtggtctcctttcaacatgcagacgttgctttcg 4562624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 20726790 - 20726840
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  20726790 ggccccgtttggattggcttattttgagcttatatgggcttatctactccc 20726840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 28199727 - 28199674
Alignment:
Q  215 attatattaaggccccgtttggattggcttattttgagtttatgtggacttatc 268  Q
    |||||||  ||| ||||||||||||| ||||||||||| |||||||||||||||    
T  28199727 attatatataggtcccgtttggattgacttattttgagcttatgtggacttatc 28199674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 3955972 - 3955924
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||| ||||||||  ||||||| ||||    
T  3955972 ccccgtttggattggcttattttgagcttatgtgggtttatctactccc 3955924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 11167238 - 11167274
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||||||||||||||||||||| |||||||    
T  11167238 aggccccgtttggattggcttattttgagcttatgtg 11167274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 33463698 - 33463750
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| ||||||||||||||||||||||||| |||||||  |||||||| ||||    
T  33463698 aaggtcccgtttggattggcttattttgagcttatgtgagcttatctactccc 33463750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 16307217 - 16307171
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||||||    
T  16307217 aggccccgtttggattgacttattttgagcttatgttggcttatcta 16307171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 35198282 - 35198328
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||| |||||||||||||||  |||||||| ||||||||    
T  35198282 aggccccgtttgaattggcttattttgaacttatgtgggcttatcta 35198328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 26704547 - 26704502
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||| |||||||||| ||| |||| ||||||||    
T  26704547 ggccccgtttggattggtttattttgagcttacgtgggcttatcta 26704502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 2e-37; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 3511414 - 3511517
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3511414 cttatcatagtttcataagctgcttatgccatattttaataagcctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 3511513  T
Q  412 cctt 415  Q
    ||||    
T  3511514 cctt 3511517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 24792437 - 24792334
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24792437 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 24792338  T
Q  412 cctt 415  Q
    ||||    
T  24792337 cctt 24792334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 25748578 - 25748681
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25748578 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 25748677  T
Q  412 cctt 415  Q
    ||||    
T  25748678 cctt 25748681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 42965101 - 42964998
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42965101 cttatcatagtttcataagctgcttatgccatattttaataagcctaaatttttagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 42965002  T
Q  412 cctt 415  Q
    ||||    
T  42965001 cctt 42964998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 20346580 - 20346682
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  20346580 ttatcatagtttcataagctgcttatgccatattttaataagtctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgaaacctc 20346679  T
Q  413 ctt 415  Q
    |||    
T  20346680 ctt 20346682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 7164275 - 7164375
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  7164275 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 7164374  T
Q  412 c 412  Q
    |    
T  7164375 c 7164375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 42204246 - 42204349
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  42204246 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgcaacct 42204345  T
Q  412 cctt 415  Q
    ||||    
T  42204346 cctt 42204349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 42673552 - 42673655
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42673552 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacct 42673651  T
Q  412 cctt 415  Q
    ||||    
T  42673652 cctt 42673655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 933377 - 933479
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  933377 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttatcctccggcttaacaaggagcttatgaatttatgtaacctc 933476  T
Q  413 ctt 415  Q
    |||    
T  933477 ctt 933479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 5280952 - 5281054
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  5280952 ttatcatagtttcataagctgcttatgccatatttcaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 5281051  T
Q  413 ctt 415  Q
    |||    
T  5281052 ctt 5281054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 4477426 - 4477323
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||||||||||||||| ||| |||||||||||| | |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||    
T  4477426 cttatcatggtttcataagctgcttatgccatatttcaataagcctaaattttcaacttaccctccggcttaacaaggagcttatgaatttatgtgacct 4477327  T
Q  412 cctt 415  Q
    ||||    
T  4477326 cctt 4477323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 12101283 - 12101180
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  12101283 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctatggcttaacaaggagcttatgaatttatgtaacct 12101184  T
Q  412 cctt 415  Q
    ||||    
T  12101183 cctt 12101180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 15656003 - 15656106
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  15656003 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaagaagcttatgaatttatgtaacct 15656102  T
Q  412 cctt 415  Q
    ||||    
T  15656103 cctt 15656106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 30181129 - 30181026
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||     
T  30181129 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggaacttatgaatttatgtaaccc 30181030  T
Q  412 cctt 415  Q
    ||||    
T  30181029 cctt 30181026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 33359195 - 33359092
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  33359195 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggtttaacaaggagcttatgaatttatgtaacct 33359096  T
Q  412 cctt 415  Q
    ||||    
T  33359095 cctt 33359092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 43068078 - 43067975
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| | | |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43068078 cttatcatagtttcataagcttcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 43067979  T
Q  412 cctt 415  Q
    ||||    
T  43067978 cctt 43067975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 6394843 - 6394945
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||||||||||||| ||| |||||||||||| | |||| ||||||||| || |||||||||||||||||||||||||||||||||||||| |||||    
T  6394843 ttatcatggtttcataagctgcttatgccatatttcaataagcctaaattttcagtttaccctccggcttaacaaggagcttatgaatttatgtgacctc 6394942  T
Q  413 ctt 415  Q
    |||    
T  6394943 ctt 6394945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 9452682 - 9452784
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||  |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  9452682 ttatcatagtttcataagctgtctatgccatattttaataagcctaaattttcagcttacactccggcttaacaaggagcttatgaatttatgtaacctc 9452781  T
Q  413 ctt 415  Q
    |||    
T  9452782 ctt 9452784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 12097694 - 12097592
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| | | |||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12097694 ttatcatagtttcataagctacttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 12097595  T
Q  413 ctt 415  Q
    |||    
T  12097594 ctt 12097592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 1803117 - 1803220
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||| | ||||||||| ||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  1803117 cttatcatagtttcataagctgcttatacgatattttattaagcctaaattttcagcttaccctccggcttaacaagaagcttatgaatttatgtaacct 1803216  T
Q  412 cctt 415  Q
    ||||    
T  1803217 cctt 1803220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 314 - 412
Target Start/End: Complemental strand, 22649798 - 22649699
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||  ||||||||| ||| |||||||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  22649798 ttatcataatttcataagctgcttatgccatattttaataagcctaaattttcaacttaccctccggcttaacaaggagcttatgaatttatgtaacctc 22649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 36890935 - 36890832
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||| | |||| |||| |||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  36890935 cttatcatagtttcataagttgcttatgccatatttcaataagcctaagttttcagcttacccttcggcttaacaaggagcttatgaatttatgtaacct 36890836  T
Q  412 cctt 415  Q
    ||||    
T  36890835 cctt 36890832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 38866636 - 38866738
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||  |||||||||||||| ||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  38866636 ttatcatagtttcataagctgtttatgccatattttaataagcataaattttcagcttaccctccggcttaagaaggagcttatgaatttatgtaacctc 38866735  T
Q  413 ctt 415  Q
    |||    
T  38866736 ctt 38866738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 48865725 - 48865827
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||| | || |||||||||||||||||||||||||||||||||||    
T  48865725 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaacatcaggcttaacaaggagcttatgaatttatgtaacctc 48865824  T
Q  413 ctt 415  Q
    |||    
T  48865825 ctt 48865827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 408
Target Start/End: Original strand, 8630758 - 8630853
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaa 408  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| | |||||||||||||||||||| ||||||||||||||||||||    
T  8630758 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcaacttaccctccggcttaacaaagagcttatgaatttatgtaa 8630853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 17753691 - 17753794
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||| ||| |||||||||| ||| |||||||||||||| |||| |||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||    
T  17753691 cttaacatagtttcataagctgcttatgccatattttaataagcctaaatttttagcttacccttcaacttaacaaggagcttatgaatttatgtaatct 17753790  T
Q  412 cctt 415  Q
    ||||    
T  17753791 cctt 17753794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 32041633 - 32041732
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| |||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||    
T  32041633 cttatcatagtttcataagctgcttatgtcatattttcataagcctaaattttcagcttaccctccagcttaacaaggagcttataaatttatgtaacct 32041732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 313 - 410
Target Start/End: Original strand, 4347364 - 4347462
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacc 410  Q
    |||| ||| |||||||||| ||| ||||||||||||||  ||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  4347364 cttaccatagtttcataagctgcttatgccatattttaacaagcctaaattttcagcttaccctcgagcttaacaaggagcttatgaatttatgtaacc 4347462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 16894611 - 16894509
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||| |  ||||||| |||||||||||||||||||||| ||    
T  16894611 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttacccttcaacttaacagggagcttatgaatttatgtaacatc 16894512  T
Q  413 ctt 415  Q
    |||    
T  16894511 ctt 16894509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 43156804 - 43156907
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||| || |||| | |||| ||||||||| |||||||||||||||||||||| || ||||||||||||||||||||    
T  43156804 cttatcatagtttcataagctgtttatggcaaatttcaataagcctaaattttcagcttaccctccggcttaacaaagaacttatgaatttatgtaacct 43156903  T
Q  412 cctt 415  Q
    ||||    
T  43156904 cctt 43156907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 354 - 415
Target Start/End: Complemental strand, 43021643 - 43021582
Alignment:
Q  354 gtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  43021643 gtctaaattttcagcttactctccgacttaacaaggagcttatgaatttatgtaacctcctt 43021582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 322 - 412
Target Start/End: Complemental strand, 46134400 - 46134309
Alignment:
Q  322 gtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||||| ||  || ||||||||| | |||| ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||    
T  46134400 gtttcataagctgtttacgccatatttcaataagcctaaattttcagcttaccctccagcttaacaaggagcttattaatttatgtaacctc 46134309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 415
Target Start/End: Complemental strand, 46891440 - 46891341
Alignment:
Q  317 tcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||| |||| ||||| ||| |||| ||||||||| | || ||||||||| |||||||||| | |||||||||||||||||||| ||||||||||||||||    
T  46891440 tcatagttttataagctgcttatgtcatattttaattagcctaaattttcagcttacccttcagcttaacaaggagcttatgagtttatgtaacctcctt 46891341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 15655903 - 15655954
Alignment:
Q  218 atattaaggccccgtttggattggcttattttgagtttatgtggacttatct 269  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  15655903 atattaaggccccgtttggattggcttattttgagcttatgtgggcttatct 15655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 33846629 - 33846531
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||| ||||||||| |||| ||||||||| ||||||      ||||||||||||||||||||||||||||||||||    
T  33846629 cttatcatagtttcataaactgcttatgtcatattttaataagcctaaattttcagcttag-----ggcttaacaaggagcttatgaatttatgtaacct 33846535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 42204147 - 42204197
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  42204147 attaaggccccgtttggattggcttattttgagcttatgtgggcttatcta 42204197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 6394746 - 6394799
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  6394746 taaggccccgtttagattggcttattttgagcttatgtgggcttatctattccc 6394799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 30181224 - 30181172
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  30181224 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 30181172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 43021777 - 43021729
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  43021777 taaggccccatttggattggcttattttaagtttatgtggacttatcta 43021729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 33846723 - 33846672
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  33846723 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 33846672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 219 - 273
Target Start/End: Original strand, 5280852 - 5280906
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatctattc 273  Q
    |||||||| ||||||||||||||||||||||||| |||||||  |||||||||||    
T  5280852 tattaaggtcccgtttggattggcttattttgagcttatgtgagcttatctattc 5280906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 33359293 - 33359243
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  33359293 attatggccccgtttggattggcttattttgagcttatgtgggcttatcta 33359243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 221 - 275
Target Start/End: Complemental strand, 42965198 - 42965144
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||| ||||||||||||||||||||| |||||||| |||||||| ||||    
T  42965198 ttaaggccccttttggattggcttattttgagcttatgtgggcttatctactccc 42965144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 19828265 - 19828318
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||| ||||||||||||||||||||||| | |||||||| ||||    
T  19828265 taaggccccgtttgaattggcttattttgagtttatgttggcttatctactccc 19828318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 275
Target Start/End: Complemental strand, 22649899 - 22649842
Alignment:
Q  218 atattaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||| ||||||||||| |||||||||||||||| |||||||| |||||||| ||||    
T  22649899 atattatggccccgtttgaattggcttattttgagcttatgtgggcttatctactccc 22649842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 4347265 - 4347321
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||| |||||||| || |||||||| |||||||| ||||    
T  4347265 tattaaggccccgtttggattgacttattttaagcttatgtgggcttatctactccc 4347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 20346487 - 20346531
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  20346487 gccccgtttggattggcttattttgagcttatgtgggcttatcta 20346531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 275
Target Start/End: Original strand, 43156718 - 43156761
Alignment:
Q  232 tttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||| |||||||| |||||||||||||    
T  43156718 tttggattggcttattttgagcttatgtgggcttatctattccc 43156761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 3511316 - 3511366
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||| ||||||||||||| ||||||||||| |||||||| ||||||||    
T  3511316 attaaggtcccgtttggattgtcttattttgagcttatgtgggcttatcta 3511366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 4477515 - 4477469
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||    
T  4477515 ccgtttggattggcttattttgagcttatgtgggcttatctactccc 4477469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 32041539 - 32041585
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||| | |||||||| ||||||||    
T  32041539 aggccccgtttggattggcttattttgtgcttatgtgggcttatcta 32041585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 933279 - 933328
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||| ||||| |||||||||||||||| | |||||||||||||||    
T  933279 ttaaggccctgtttgaattggcttattttgagctcatgtggacttatcta 933328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 9452591 - 9452636
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctattc 273  Q
    ||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  9452591 cccgtttggattgacttattttgagcttatgtgaacttatctattc 9452636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 220 - 257
Target Start/End: Complemental strand, 16894700 - 16894663
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttat 257  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16894700 attaaggccccgtttggattggcttattttgagcttat 16894663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 43068174 - 43068121
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||| ||||    
T  43068174 taaggccccgtttggattgacttattttgagcttatatgggcttatctactccc 43068121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 7164184 - 7164232
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  7164184 ccccgtttggattggcttattttgagcttatatgggcttatctactccc 7164232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 12101378 - 12101326
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||| ||||||||||||||||||||| ||||||||  ||||||| ||||    
T  12101378 aaggccccatttggattggcttattttgagcttatgtgggtttatctactccc 12101326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 37704975 - 37705023
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||| ||| ||||||||||| |||||||| ||||||||    
T  37704975 taaggccccgtttgggttgacttattttgagcttatgtgggcttatcta 37705023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 275
Target Start/End: Original strand, 1803029 - 1803074
Alignment:
Q  230 cgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  1803029 cgtttggattgacttattttgagcttatgtgggcttatctactccc 1803074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 37006014 - 37005974
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtg 260  Q
    |||||||| ||||||||||||||||||||| || |||||||    
T  37006014 attaaggctccgtttggattggcttattttaagcttatgtg 37005974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 95)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 50055204 - 50055101
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||||||||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50055204 cttatcatggtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 50055105  T
Q  412 cctt 415  Q
    ||||    
T  50055104 cctt 50055101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 28032815 - 28032712
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| || ||||||| ||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28032815 cttatcatagtatcataagctgcttatgccatattttaataagtctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 28032716  T
Q  412 cctt 415  Q
    ||||    
T  28032715 cctt 28032712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 314 - 412
Target Start/End: Complemental strand, 1756866 - 1756767
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1756866 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 1756767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 8591195 - 8591092
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8591195 cttatcatagtttcataagctgcttatgccatatgttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 8591096  T
Q  412 cctt 415  Q
    ||||    
T  8591095 cctt 8591092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 11639681 - 11639570
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  11639681 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 11639582  T
Q  412 cctttgcttctc 423  Q
    | |||| |||||    
T  11639581 cttttgattctc 11639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 19913733 - 19913630
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19913733 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 19913634  T
Q  412 cctt 415  Q
    ||||    
T  19913633 cctt 19913630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 35490876 - 35490773
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  35490876 cttatcatagtttcataagttgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacca 35490777  T
Q  412 cctt 415  Q
    ||||    
T  35490776 cctt 35490773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 53717567 - 53717464
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53717567 cttatcatagtttcataagctgcttatgccctattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 53717468  T
Q  412 cctt 415  Q
    ||||    
T  53717467 cctt 53717464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 54189635 - 54189738
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  54189635 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 54189734  T
Q  412 cctt 415  Q
    ||||    
T  54189735 cctt 54189738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 15241130 - 15241028
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15241130 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 15241031  T
Q  413 ctt 415  Q
    |||    
T  15241030 ctt 15241028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 423
Target Start/End: Complemental strand, 23704311 - 23704201
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| ||||| |||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23704311 ttatcatagtttcataagctgcttatgctatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 23704212  T
Q  413 ctttgcttctc 423  Q
     |||| |||||    
T  23704211 atttgattctc 23704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 45424636 - 45424534
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  45424636 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacctc 45424537  T
Q  413 ctt 415  Q
    |||    
T  45424536 ctt 45424534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 19165073 - 19164973
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatattttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcc 413  Q
    ||||||| |||||||||| ||| |||||||||||| ||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19165073 ttatcatagtttcataagctgcttatgccatatttaataagcctaaattttcagcttaccctc-ggcttaacaaggagcttatgaatttatgtaacctcc 19164975  T
Q  414 tt 415  Q
    ||    
T  19164974 tt 19164973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 314 - 413
Target Start/End: Original strand, 38055248 - 38055348
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  38055248 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttactctccggcttaacaaggagcttatgaatttatgtaacctc 38055347  T
Q  413 c 413  Q
    |    
T  38055348 c 38055348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 40680141 - 40680041
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||||||||||| ||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  40680141 cttatcatagtttcataagctgcttatgccatattttcataagcctaaatttttagcttacccttcggcttaacaagaagcttatgaatttatgtaacct 40680042  T
Q  412 c 412  Q
    |    
T  40680041 c 40680041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 1617174 - 1617277
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| | || ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1617174 cttatcatagtttcataagctgcttgtgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 1617273  T
Q  412 cctt 415  Q
    ||||    
T  1617274 cctt 1617277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 2481511 - 2481408
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| | ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  2481511 cttatcatagtttcataagctgcttatgccatattttaataagccaaaattttcagcttaccttccggcttaacaaggagcttatgaatttatgtaacct 2481412  T
Q  412 cctt 415  Q
    ||||    
T  2481411 cctt 2481408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 23269149 - 23269046
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||| |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  23269149 cttatcatagtttcataagctgcttatgctatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaatct 23269050  T
Q  412 cctt 415  Q
    ||||    
T  23269049 cctt 23269046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 27488751 - 27488648
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||  |||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  27488751 cttatcatagtttcataagctgcttatgccatattttaataagcttaaattttcagcttaccctccggcttaacaaagagcttatgaatttatgtaacct 27488652  T
Q  412 cctt 415  Q
    ||||    
T  27488651 cctt 27488648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 27583735 - 27583632
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| ||| |||||| ||| ||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||    
T  27583735 cttatcatagttgcataagctgcttatgccatattttcataagcctaaatttttagcttaccctctggcttaacaaggagcttatgaatttatgtaatct 27583636  T
Q  412 cctt 415  Q
    ||||    
T  27583635 cctt 27583632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 33703931 - 33704034
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  33703931 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttatcctccggcttaacaaggagcttatgaatttatgtaacct 33704030  T
Q  412 cctt 415  Q
    ||||    
T  33704031 cctt 33704034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 40428823 - 40428720
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||| ||||||||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  40428823 cttatcatagtttcataagctgcttataccatattttgataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 40428724  T
Q  412 cctt 415  Q
    ||||    
T  40428723 cctt 40428720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 43290063 - 43289960
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  43290063 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaataaggagcttatgaatttatgtaacct 43289964  T
Q  412 cctt 415  Q
    ||||    
T  43289963 cctt 43289960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 44785020 - 44784917
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  44785020 cttatcatagtttcataagttgcttatgccatattttaataagcctaaactttcagcttaccctccggcttaacaatgagcttatgaatttatgtaacct 44784921  T
Q  412 cctt 415  Q
    ||||    
T  44784920 cctt 44784917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 47632129 - 47632228
Alignment:
Q  317 tcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||| |||||||||| ||| |||||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47632129 tcatagtttcataagctgcttatgccatattttaataagcttaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 47632228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 52139293 - 52139396
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||    
T  52139293 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccatccggcttaacaagaagcttatgaatttatgtaacct 52139392  T
Q  412 cctt 415  Q
    ||||    
T  52139393 cctt 52139396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 27536206 - 27536104
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||  ||| |||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  27536206 ttatcatagtttcataaactgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacctc 27536107  T
Q  413 ctt 415  Q
    |||    
T  27536106 ctt 27536104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 31969772 - 31969874
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| ||||| |||||||| |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  31969772 ttatcatagtttcataagctgcttatgctatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacctc 31969871  T
Q  413 ctt 415  Q
    |||    
T  31969872 ctt 31969874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 6611463 - 6611360
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||| |||||||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  6611463 cttatcatagtttcataagctgtttatgtcatattttgataagcctaaattttcagcttaccctccggcttaacaaagagcttatgaatttatgtaacct 6611364  T
Q  412 cctt 415  Q
    ||||    
T  6611363 cctt 6611360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 337 - 415
Target Start/End: Complemental strand, 6688706 - 6688627
Alignment:
Q  337 tatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6688706 tatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 6688627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 23776562 - 23776463
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  23776562 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaggatcttatgaatttatgtaacct 23776463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 37968860 - 37968757
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||| | |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||    
T  37968860 cttatcatagtttcataagctgcttatgccatatttcaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtgacct 37968761  T
Q  412 cctt 415  Q
    ||||    
T  37968760 cctt 37968757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 48909936 - 48910039
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||||||||||||  ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  48909936 cttatcatagtttcataagctgcttatgccatattttaacaaacctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaatct 48910035  T
Q  412 cctt 415  Q
    ||||    
T  48910036 cctt 48910039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 50353891 - 50353994
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||| || |||||||||| ||| |||||||||||||| |||| |||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  50353891 cttatgatagtttcataagctgcttatgccatattttaataagcctaatttttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacct 50353990  T
Q  412 cctt 415  Q
    ||||    
T  50353991 cctt 50353994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 53353149 - 53353256
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-----taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgta 407  Q
    |||||||| |||||||||| ||| ||||||||||||||     |||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  53353149 cttatcatagtttcataagctgcttatgccatattttaatatataagcctaaattttcagcttaccctccggcttaacaaggagcttatggatttatgta 53353248  T
Q  408 acctcctt 415  Q
    ||||||||    
T  53353249 acctcctt 53353256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 54412718 - 54412821
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| |||||| || |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||    
T  54412718 cttatcatagtttcataagctgcttatgtcatattctaataagtctaaattttcagcttaccctctggcttaacaaggagcatatgaatttatgtaacct 54412817  T
Q  412 cctt 415  Q
    ||||    
T  54412818 cctt 54412821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 20877138 - 20877240
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||    
T  20877138 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatggatttacgtaacctc 20877237  T
Q  413 ctt 415  Q
    |||    
T  20877238 ctt 20877240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 37464812 - 37464914
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| || ||||||||||| ||||||| ||||||||||||||||||||||||    
T  37464812 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagtttaccctccggtttaacaaagagcttatgaatttatgtaacctc 37464911  T
Q  413 ctt 415  Q
    |||    
T  37464912 ctt 37464914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 44379289 - 44379187
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||    
T  44379289 ttatcatagtttcataagttgcttatgtcatattttaataagcctaaattttcagcttacccttcggcttaacaaggagcttatgaatttatgcaacctc 44379190  T
Q  413 ctt 415  Q
    |||    
T  44379189 ctt 44379187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 14987882 - 14987985
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||  ||||||||| |||||||||||||||||||||||    
T  14987882 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctcttgcttaacaatgagcttatgaatttatgtaacct 14987981  T
Q  412 cctt 415  Q
    ||||    
T  14987982 cctt 14987985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 15669273 - 15669376
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| |||| |||| |||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  15669273 cttatcatagtttcataagctgcttatgtcatactttaataagcctaaattttcagcttaccgtccggcttaacaaagagcttatgaatttatgtaacct 15669372  T
Q  412 cctt 415  Q
    ||||    
T  15669373 cctt 15669376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 16700871 - 16700974
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||    
T  16700871 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctagcttaacaaggagcttataaatttatgtaacct 16700970  T
Q  412 cctt 415  Q
    ||||    
T  16700971 cctt 16700974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 44375936 - 44376038
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||  ||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||    
T  44375936 ttatcatagtttcataaactgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaaaaaagagcttatgaatttatgtaacctc 44376035  T
Q  413 ctt 415  Q
    |||    
T  44376036 ctt 44376038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 30171670 - 30171773
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||| |||||||| | |||| ||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||    
T  30171670 cttatcatagtttcataagctgcttataccatatttcaataagcctaaattttcagcttaccttccggtttaacaaggagcttatgaatttatttaacct 30171769  T
Q  412 cctt 415  Q
    ||||    
T  30171770 cctt 30171773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 30423667 - 30423565
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||| | ||||  |||||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  30423667 cttatcatagtttcataagctgcttatgccatatttcaataagcataaattttcagcttacccttcggcttaacaaggagctta-gaatttatgtaacct 30423569  T
Q  412 cctt 415  Q
    ||||    
T  30423568 cctt 30423565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 53875747 - 53875850
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||| ||||| ||| |||| ||||||| | |||| ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  53875747 cttatcatagttttataagctgcttatgtcatatttcaataagcctaaattttcaacttaccctccggcttaacaaggagcttatgaatttatgcaacct 53875846  T
Q  412 cctt 415  Q
    ||||    
T  53875847 cctt 53875850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 8932272 - 8932178
Alignment:
Q  322 gtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||||||||| ||| |||||||||||||| |||  ||||||||| |||||||||| | |||||||||||| ||||||||||||||||||||||||    
T  8932272 gtttcataagctgcttatgccatattttaataaacctaaattttcagcttacccttcagcttaacaaggaacttatgaatttatgtaacctcctt 8932178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 16703912 - 16704014
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| || ||| |||||||||||||||||||| ||| ||||||||||||| |    
T  16703912 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagtttatcctccggcttaacaaggagcctataaatttatgtaacccc 16704011  T
Q  413 ctt 415  Q
    |||    
T  16704012 ctt 16704014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 341 - 415
Target Start/End: Original strand, 53408137 - 53408213
Alignment:
Q  341 ccatattttat-aagtctaaatttttagcttaccct-ccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||| ||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  53408137 ccatattttattaagcctaaattttcagcttacccttccggcttaacaaggagcttatgaatttatgtaacctcctt 53408213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 341 - 423
Target Start/End: Complemental strand, 55344900 - 55344817
Alignment:
Q  341 ccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctttgcttctc 423  Q
    |||||||||| |||| | ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  55344900 ccatattttaataagccaaaattttcagcttaccatccggtttaacaaggagcttatgaatttatgtaacctcctttgattctc 55344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 415
Target Start/End: Complemental strand, 23261935 - 23261886
Alignment:
Q  366 agcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23261935 agcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 23261886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 47632032 - 47632076
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  47632032 gccccgtttggattggcttattttgagtttatgtggacttatcta 47632076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 314 - 393
Target Start/End: Original strand, 28360521 - 28360602
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccata--ttttataagtctaaatttttagcttaccctccggcttaacaaggagct 393  Q
    ||||||| |||| ||||| ||| ||||||||   ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  28360521 ttatcatagttttataagctgcttatgccattatttttataagcctaaattttcagcttaccctccggcttaacaaggagct 28360602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 9595943 - 9595902
Alignment:
Q  374 ctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9595943 ctccggcttaacaaggagcttatgaatttatgtaacctcctt 9595902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 30423768 - 30423715
Alignment:
Q  217 tatattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30423768 tatactaaggtcccgtttggattggcttattttgagtttatgtgggcttatcta 30423715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 38071422 - 38071327
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| || |||||| || ||||     ||||||||||||||||||||||||||||||||||    
T  38071422 ttatcatagtttcataagctgcttatgccatattttaataagcctgaattttcagtttacgg---ggcttaacaaggagcttatgaatttatgtaacct 38071327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Complemental strand, 44785115 - 44785063
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  44785115 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 44785063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 6611557 - 6611506
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  6611557 aggccccgtttggattggtttattttgagcttatgtggacttatctactccc 6611506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 20877039 - 20877094
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  20877039 attaaggtcccgtttggattggcttattttgagcttatgtgggcttatctactccc 20877094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 50053439 - 50053490
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||| ||||    
T  50053439 aggccccgtttggattggcttattttgagcttatatggacttatctactccc 50053490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 50055298 - 50055247
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  50055298 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 50055247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 54189540 - 54189587
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  54189540 aaggccccgtttggattggcttattttgagcttatgtgggcttatcta 54189587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 2481605 - 2481559
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  2481605 aggccccgtttggattggcttattttgagcttatgtgggcttatcta 2481559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 6688817 - 6688767
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||| |||||||||||||||||||| |||||||| ||||    
T  6688817 ggccccgtttggattgacttattttgagtttatgtgggcttatctactccc 6688767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 8932379 - 8932329
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  8932379 attaaggccccgtttggattggcttattttgagcttatgcgggcttatcta 8932329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 217 - 275
Target Start/End: Original strand, 16700770 - 16700828
Alignment:
Q  217 tatattaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||  |||||||||||||||||||||||| |||||||| |||||||| ||||    
T  16700770 tatattaaggttccgtttggattggcttattttgagcttatgtgggcttatctactccc 16700828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 19913826 - 19913776
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  19913826 ggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 19913776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 23776655 - 23776605
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  23776655 ggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 23776605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 14987786 - 14987831
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttat 267  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||    
T  14987786 taaggccccgtttggattggcttattttgagcttatgtgggcttat 14987831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Complemental strand, 23265957 - 23265908
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  23265957 ttaaggtcccgtttggattggcttattttgagcttatgtgggcttatcta 23265908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 273
Target Start/End: Original strand, 37464717 - 37464766
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattc 273  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||||    
T  37464717 aggccccgtttgaattggcttattttgagcttatgtgggcttatctattc 37464766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 378 - 415
Target Start/End: Original strand, 50055301 - 50055338
Alignment:
Q  378 ggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50055301 ggcttaacaaggagcttatgaatttatgtaacctcctt 50055338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 54412627 - 54412675
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  54412627 ccccgtttggattggcttattttgagcttatgtgggcttatctactccc 54412675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 274
Target Start/End: Original strand, 44375844 - 44375891
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattcc 274  Q
    ||||||||||||||||||||||| || |||||||| ||||||||||||    
T  44375844 ccccgtttggattggcttattttaagcttatgtgggcttatctattcc 44375891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 9596031 - 9595986
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||    
T  9596031 aggccccgtttggattggctta-tttgagtttatgtgggcttatcta 9595986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 15669179 - 15669225
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||    
T  15669179 aggccccgtttggattggcttattttgagcttatgtgagcttatcta 15669225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 19165164 - 19165118
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||    
T  19165164 ccgtttggattggcttattttgagcttatgtgggcttatctactccc 19165118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 38055154 - 38055204
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  38055154 ggccccgtttggattgacttattttgagcttatgtgggcttatctactccc 38055204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 48748197 - 48748251
Alignment:
Q  361 tttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||| ||| ||||||||| ||||| ||||||||||||||||||||||| ||||||    
T  48748197 ttttcagcataccctccgtcttaataaggagcttatgaatttatgtaatctcctt 48748251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 53717667 - 53717625
Alignment:
Q  218 atattaaggccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  53717667 atatttaggccccgtttggattggcttattttgagcttatgtg 53717625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 1617084 - 1617129
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctattc 273  Q
    ||||||||||||||||||||||||| |||||||  |||||||||||    
T  1617084 cccgtttggattggcttattttgagcttatgtgagcttatctattc 1617129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 50353795 - 50353848
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||| || ||||  |||||||| ||||    
T  50353795 taaggccccgtttggattggcttattttgagcttctgtgagcttatctactccc 50353848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 1756958 - 1756910
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  1756958 ccccgtttggattggcttattttgagcttatatgggcttatctactccc 1756910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 45424733 - 45424685
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||| ||||||||||| |||||| | ||||||||    
T  45424733 taaggccccgtttggattgacttattttgagcttatgttggcttatcta 45424685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 50053533 - 50053585
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttt 364  Q
    |||||||| |||||||||| ||| ||||||||||||| |||||||||||||||    
T  50053533 cttatcatagtttcataagctgcttatgccatattttaataagtctaaatttt 50053585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 48909842 - 48909893
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||| |||||||||||||||||||||| ||||||||  ||||||| ||||    
T  48909842 aggccctgtttggattggcttattttgagcttatgtgggtttatctactccc 48909893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 15241225 - 15241179
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||| ||||||||||||||||||||||| ||||||||  |||||||    
T  15241225 aggcctcgtttggattggcttattttgagcttatgtgggtttatcta 15241179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 252
Target Start/End: Original strand, 53353049 - 53353079
Alignment:
Q  222 taaggccccgtttggattggcttattttgag 252  Q
    |||||||||||||||||||||||||||||||    
T  53353049 taaggccccgtttggattggcttattttgag 53353079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 27536297 - 27536264
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttat 257  Q
    ||||||||||||||||||||||||||||| ||||    
T  27536297 aggccccgtttggattggcttattttgagcttat 27536264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 11639773 - 11639729
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||| |||||||||  |||||||| ||||||||    
T  11639773 gccccgtttggattggtttattttgaacttatgtgggcttatcta 11639729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 23704408 - 23704360
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||| |||||||||||||||||||||| |||| ||  ||||||||    
T  23704408 taaggccctgtttggattggcttattttgagcttatatgagcttatcta 23704360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 30171581 - 30171621
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatct 269  Q
    |||||||||||||||||||||||| |||||||  |||||||    
T  30171581 ccgtttggattggcttattttgagcttatgtgagcttatct 30171621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 35490966 - 35490926
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatc 268  Q
    ||||||||||||||||||||||||| |||| ||| ||||||    
T  35490966 cccgtttggattggcttattttgagcttatatgggcttatc 35490926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 40428915 - 40428871
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||| |||||||||||||||| ||||||||  |||||||    
T  40428915 gccccgtttgaattggcttattttgagcttatgtgggtttatcta 40428871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 272
Target Start/End: Original strand, 52139203 - 52139247
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctatt 272  Q
    ||||||||||||||||||||||||  ||||||||  |||||||||    
T  52139203 cccgtttggattggcttattttgaacttatgtgggtttatctatt 52139247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 9e-37; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 314 - 423
Target Start/End: Original strand, 4121031 - 4121141
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4121031 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 4121130  T
Q  413 ctttgcttctc 423  Q
    ||||| |||||    
T  4121131 ctttgattctc 4121141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 16069446 - 16069549
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16069446 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 16069545  T
Q  412 cctt 415  Q
    ||||    
T  16069546 cctt 16069549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 16737562 - 16737459
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16737562 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 16737463  T
Q  412 cctt 415  Q
    ||||    
T  16737462 cctt 16737459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 1579130 - 1579232
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1579130 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 1579229  T
Q  413 ctt 415  Q
    |||    
T  1579230 ctt 1579232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 1605685 - 1605583
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  1605685 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 1605586  T
Q  413 ctt 415  Q
    |||    
T  1605585 ctt 1605583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 31883238 - 31883340
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31883238 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 31883337  T
Q  413 ctt 415  Q
    |||    
T  31883338 ctt 31883340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 3386601 - 3386498
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  3386601 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcctatgaatttatgtaacct 3386502  T
Q  412 cctt 415  Q
    ||||    
T  3386501 cctt 3386498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 9008172 - 9008073
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9008172 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 9008073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 314 - 412
Target Start/End: Original strand, 27420952 - 27421051
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27420952 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 27421051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 33991233 - 33991333
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  33991233 cttatcatagtttcataagttgcttatgccatattttaataagcctaaattttcagcttacccttcggcttaacaaggagcttatgaatttatgtaacct 33991332  T
Q  412 c 412  Q
    |    
T  33991333 c 33991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 1165716 - 1165613
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  1165716 cttatcatagtttcataagttgcttatgtcatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 1165617  T
Q  412 cctt 415  Q
    ||||    
T  1165616 cctt 1165613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 3921674 - 3921777
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||    
T  3921674 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaaaaaggagcttatgaatttatgtaacct 3921773  T
Q  412 cctt 415  Q
    ||||    
T  3921774 cctt 3921777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 27679284 - 27679181
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||    
T  27679284 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaatct 27679185  T
Q  412 cctt 415  Q
    ||||    
T  27679184 cctt 27679181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 33491311 - 33491208
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| | |||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  33491311 cttatcatagtttcataagctgcttttgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 33491212  T
Q  412 cctt 415  Q
    ||||    
T  33491211 cctt 33491208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 411
Target Start/End: Complemental strand, 38598565 - 38598466
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  38598565 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttacccttcggcttaacaaggagcttatgaatttatgtaacct 38598466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 19358619 - 19358722
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||    
T  19358619 cttatcatagtttcataagctgcttatgccatattttagtaagcctaaattttcagcttaccctccaacttaacaaggagcttatgaatttatgtaatct 19358718  T
Q  412 cctt 415  Q
    ||||    
T  19358719 cctt 19358722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 24105786 - 24105683
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  24105786 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattatcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 24105687  T
Q  412 cctt 415  Q
    ||||    
T  24105686 cctt 24105683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 27025049 - 27025152
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||| ||||| |||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||    
T  27025049 cttatcatagtttcataagctgcttatgccattttttaataagcctaaattttcagcttaccctccggcttaacaaggagtttataaatttatgtaacct 27025148  T
Q  412 cctt 415  Q
    ||||    
T  27025149 cctt 27025152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 411
Target Start/End: Original strand, 5203066 - 5203164
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||| |||||||||| ||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  5203066 ttatcatagtttcataagctgcttatgccatatttcaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtcacct 5203164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 8374452 - 8374351
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  8374452 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttacccttcggcttaacaaggagcttatg-atttatgtaacctc 8374354  T
Q  413 ctt 415  Q
    |||    
T  8374353 ctt 8374351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 315 - 415
Target Start/End: Complemental strand, 20992259 - 20992158
Alignment:
Q  315 tatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcc 413  Q
    |||||| |||||||||| ||  |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||    
T  20992259 tatcatagtttcataagctgattatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaaccccc 20992160  T
Q  414 tt 415  Q
    ||    
T  20992159 tt 20992158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 31410569 - 31410672
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||| ||||| ||| |||||||||||| | |||| ||||||||| | |||||||||||||||||||||||| |||||||||||||| ||||    
T  31410569 cttatcatagttttataagctgcttatgccatatttcaataagcctaaattttcaacttaccctccggcttaacaaggagtttatgaatttatgtgacct 31410668  T
Q  412 cctt 415  Q
    ||||    
T  31410669 cctt 31410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 35782759 - 35782659
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccg-gcttaacaaggagcttatgaatttatgtaacc 410  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||  |||||||| ||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  35782759 cttatcatagtttcataagctgcttatgccatattttaataagcttaaattttcagcctaccctccgtgctta-caaggagcttatgaatttatgtaacc 35782661  T
Q  411 tc 412  Q
    ||    
T  35782660 tc 35782659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 26603057 - 26602957
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||||||||||||| ||||  ||| |||| || |||| ||| || |||||||||||||||||||||||||||||||    
T  26603057 cttatcatagtttcataaactgcttatgccatattttaataagcataatttttcagtttactctctggtttaacaaggagcttatgaatttatgtaacct 26602958  T
Q  412 c 412  Q
    |    
T  26602957 c 26602957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 9008270 - 9008215
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  9008270 attaaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 9008215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 360 - 415
Target Start/End: Complemental strand, 35420491 - 35420436
Alignment:
Q  360 atttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||||||  ||||||||||||||||||| |||||||||||||||||||||||||||    
T  35420491 atttttattttaccctccggcttaacaaagagcttatgaatttatgtaacctcctt 35420436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 27679378 - 27679332
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  27679378 aggccccgtttggattggcttattttgagcttatgtgggcttatcta 27679332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 33991139 - 33991185
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||    
T  33991139 aggccccgtttgaattgacttattttgagtttatgtggacttatcta 33991185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 35782857 - 35782807
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||||||||    
T  35782857 attaaggccccgtttggattgccttattttgagcttatgtgggcttatcta 35782807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 24105882 - 24105829
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||| ||||    
T  24105882 taaggctccgtttggattggcttattttgagcttatgtgggcttatctactccc 24105829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 27420855 - 27420908
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  27420855 taaggccccgtttggattggcttattttgagcttatatgggcttatctactccc 27420908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 20992357 - 20992309
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  20992357 taaggccccgtttgaattggcttattttgagcttatgtggtcttatcta 20992309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 33491407 - 33491359
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||||| ||||||||  |||||||    
T  33491407 taaggccccgtttggattggcttattttgagcttatgtgggtttatcta 33491359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 1579035 - 1579086
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  1579035 aggccccgtttggattggcttattttgagcttatatgggcttatctactccc 1579086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 1605780 - 1605729
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  1605780 aggccccgtttggattggcttattttgagcttatatgggcttatctactccc 1605729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 3386688 - 3386649
Alignment:
Q  231 gtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  3386688 gtttggattggcttattttgagcttatgtggacttatcta 3386649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 31883142 - 31883189
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  31883142 aaggctccgtttggattgacttattttgagcttatgtggacttatcta 31883189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 19358522 - 19358571
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||| ||||||||||| |||||||  ||||||||    
T  19358522 ttaaggccccgtttggattgccttattttgagcttatgtgagcttatcta 19358571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 4120935 - 4120987
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||| |||||||||||||| ||||||||  ||||||| ||||    
T  4120935 aaggccccgtttggaatggcttattttgagcttatgtgggtttatctactccc 4120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 3921576 - 3921631
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||| |||||||||||||  ||||||||||||||| ||| |||||||| ||||    
T  3921576 attaaggtcccgtttggattgatttattttgagtttatatgggcttatctactccc 3921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 20992498 - 20992459
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgt 259  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  20992498 attaaggccctgtttggattggcttattttgagcttatgt 20992459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 259
Target Start/End: Original strand, 5202972 - 5203006
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgt 259  Q
    |||||||||||||||| ||||||||||||||||||    
T  5202972 ggccccgtttggattgacttattttgagtttatgt 5203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 8374547 - 8374501
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||| |||||||| || |||||||| ||||||||    
T  8374547 aggccccgtttggattgccttattttaagcttatgtgggcttatcta 8374501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 16069350 - 16069403
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||| ||||||||||||| ||||||||||| |||||| | |||||||| ||||    
T  16069350 taaggtcccgtttggattgacttattttgagcttatgtaggcttatctactccc 16069403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 26603140 - 26603108
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttat 257  Q
    |||||||||||||||||||||||||||| ||||    
T  26603140 ggccccgtttggattggcttattttgagcttat 26603108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 23066 - 22963
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  23066 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 22967  T
Q  412 cctt 415  Q
    ||||    
T  22966 cctt 22963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 23159 - 23114
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||| |||| ||| ||||||||    
T  23159 ggccccgtttggattggcttattttgagcttatatgggcttatcta 23114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 5e-35; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 14422795 - 14422898
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14422795 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 14422894  T
Q  412 cctt 415  Q
    ||||    
T  14422895 cctt 14422898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 39206678 - 39206781
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39206678 cttatcatagtttcataagctgcttatgccatattttaataagtctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 39206777  T
Q  412 cctt 415  Q
    ||||    
T  39206778 cctt 39206781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 144487 - 144589
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  144487 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 144586  T
Q  413 ctt 415  Q
    |||    
T  144587 ctt 144589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 33278493 - 33278595
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33278493 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 33278592  T
Q  413 ctt 415  Q
    |||    
T  33278593 ctt 33278595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 2042639 - 2042536
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2042639 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 2042540  T
Q  412 cctt 415  Q
    ||||    
T  2042539 cctt 2042536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 4035939 - 4036042
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  4035939 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttatcctccggcttaacaaggagcttatgaatttatgtaacct 4036038  T
Q  412 cctt 415  Q
    ||||    
T  4036039 cctt 4036042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 22260745 - 22260642
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||| | |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22260745 cttatcctagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 22260646  T
Q  412 cctt 415  Q
    ||||    
T  22260645 cctt 22260642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 29938153 - 29938256
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  29938153 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggtttaacaaggagcttatgaatttatgtaacct 29938252  T
Q  412 cctt 415  Q
    ||||    
T  29938253 cctt 29938256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 24113280 - 24113178
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24113280 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 24113181  T
Q  413 ctt 415  Q
    |||    
T  24113180 ctt 24113178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 6144388 - 6144285
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||  |||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  6144388 cttatcatagtttcataagctgcttatgccatattttaataagcataaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 6144289  T
Q  412 cctt 415  Q
    ||||    
T  6144288 cctt 6144285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 314 - 412
Target Start/End: Complemental strand, 10836869 - 10836770
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||  ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10836869 ttatcatagtttcataaactgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 10836770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 13110496 - 13110599
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||| ||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  13110496 cttatcatagtttaataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgagtttatgtaacct 13110595  T
Q  412 cctt 415  Q
    ||||    
T  13110596 cctt 13110599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 18594629 - 18594732
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  18594629 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 18594728  T
Q  412 cctt 415  Q
    ||||    
T  18594729 cctt 18594732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 7774857 - 7774959
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| |||||||||| |||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7774857 ttatcatagtttcataagctgcttatgtcatattttattaagcttaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 7774956  T
Q  413 ctt 415  Q
    |||    
T  7774957 ctt 7774959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 34679571 - 34679469
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| ||| |||||||||| |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  34679571 ttatcatagtttcataagctgcttataccatattttaataagcctaaattttcagcttaccctccggcttaacaatgagcttatgaatttatgtaacctc 34679472  T
Q  413 ctt 415  Q
    |||    
T  34679471 ctt 34679469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 38167269 - 38167167
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||    
T  38167269 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttatcctccggcttaacaagaagcttatgaatttatgtaacctc 38167170  T
Q  413 ctt 415  Q
    |||    
T  38167169 ctt 38167167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 44805059 - 44804956
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| | |||||||||| |||||||||||||||||||||||||||||||||    
T  44805059 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcaacttaccctccagcttaacaaggagcttatgaatttatgtaacct 44804960  T
Q  412 cctt 415  Q
    ||||    
T  44804959 cctt 44804956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 35118146 - 35118046
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  35118146 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttacccttcggcttaacaagaagcttatgaatttatgtaacct 35118047  T
Q  412 c 412  Q
    |    
T  35118046 c 35118046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 41575605 - 41575705
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||| | |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  41575605 cttatcatagtttcataagctgcttatgtcatatttcaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacct 41575704  T
Q  412 c 412  Q
    |    
T  41575705 c 41575705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 9807352 - 9807455
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| | |||||||| ||| |||| ||||||||| |||| ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||    
T  9807352 cttatcatagcttcataagctgcttatgtcatattttaataagcctaaattttcaacttaccctccggcttaacaaggagcttatgaatttatgaaacct 9807451  T
Q  412 cctt 415  Q
    ||||    
T  9807452 cctt 9807455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 34999011 - 34998908
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||| | |||||||||| ||| |||||||||||||| |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||    
T  34999011 cttatcttagtttcataagctgcttatgccatattttaataagcctaaattttcagcttgccctccggcttaacaaggagcttatgaatttatttaatct 34998912  T
Q  412 cctt 415  Q
    ||||    
T  34998911 cctt 34998908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 7791504 - 7791606
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||| | ||||  |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7791504 ttatcatagtttcataagctgcttatgtcatatttcaataagcttaaactttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 7791603  T
Q  413 ctt 415  Q
    |||    
T  7791604 ctt 7791606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 39218870 - 39218972
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| | |||||||| ||| |||||||||||| | |||| ||||||||| |||||||||||||||||||||||||||| |||||||||||| |||||    
T  39218870 ttatcatagcttcataagctgcttatgccatatttcaataagcctaaattttcagcttaccctccggcttaacaaggagctgatgaatttatgtgacctc 39218969  T
Q  413 ctt 415  Q
    |||    
T  39218970 ctt 39218972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 36491249 - 36491349
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||  |||||||||||||| |||| ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||    
T  36491249 cttatcatagtttcataacttgtttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaagaagcttatgaatttatgtaacct 36491348  T
Q  412 c 412  Q
    |    
T  36491349 c 36491349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 412
Target Start/End: Original strand, 7812088 - 7812187
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||| | ||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||    
T  7812088 ttatcatagtttcataagctgcttatgtcatatttcaataagcttaaattttcagcttactctccggcttaacaaggagcttatgaatttatgtaacctc 7812187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 28639375 - 28639475
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||  ||||||||||  ||||||||||||    
T  28639375 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacatagagcttatga--ttatgtaacctc 28639472  T
Q  413 ctt 415  Q
    |||    
T  28639473 ctt 28639475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 42571685 - 42571783
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||| |||||||||| ||| |||| ||||||| | | | |||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||    
T  42571685 cttatcatagtttcataagctgcttatgtcatatttca-atgcctaaatttttagcttacccttcggcttaacaaggaacttatgaatttatgcaacctc 42571783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 34842479 - 34842377
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||| | |||| ||||||||  ||||||||| ||| ||||||||||||||||| ||||||||| |||||    
T  34842479 ttatcatagtttcataagctgcttatgccatatttcaataagcctaaatttccagcttacccaccgtcttaacaaggagcttattaatttatgtgacctc 34842380  T
Q  413 ctt 415  Q
    |||    
T  34842379 ctt 34842377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 66295 - 66191
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctc-cggcttaacaaggagcttatgaatttatgtaacc 410  Q
    ||||| || |||||||||| ||| |||||||||||| | ||||| |||||||| ||||||||||  ||||||||||||||||||||||||||| || |||    
T  66295 cttataatagtttcataagctgcttatgccatatttcaataagtttaaattttcagcttaccctttcggcttaacaaggagcttatgaatttacgtgacc 66196  T
Q  411 tcctt 415  Q
    |||||    
T  66195 tcctt 66191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 5320657 - 5320759
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||| ||| | |||| ||||||||| | |||||| || ||||||||||||||||||||||||||||| |||||    
T  5320657 ttatcatagtttcataagttgcttatgtcatgtttcaataagcctaaattttcaacttaccatctggcttaacaaggagcttatgaatttatgtgacctc 5320756  T
Q  413 ctt 415  Q
    |||    
T  5320757 ctt 5320759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 33278399 - 33278444
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  33278399 ggccccgtttggattggcttattttgagtttatatggacttatcta 33278444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 223 - 275
Target Start/End: Original strand, 18594534 - 18594586
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  18594534 aaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 18594586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 39206584 - 39206635
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  39206584 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 39206635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 35118239 - 35118189
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  35118239 ggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 35118189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 38167363 - 38167313
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||| |||||||||||| |||||||||||||||||| |||||||||||||    
T  38167363 ggccctgtttggattggcctattttgagtttatgtgggcttatctattccc 38167313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 39218775 - 39218821
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  39218775 aggccccgtttggattggcttattttgagcttatgtgggcttatcta 39218821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 275
Target Start/End: Complemental strand, 34842572 - 34842523
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  34842572 gccccgtttggattggcttattttgagcttatgtgggcttatctactccc 34842523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 40118063 - 40118010
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||| ||||||||  ||||||| ||||    
T  40118063 taaggccccgtttggattggcttattttgagcttatgtgggtttatctactccc 40118010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 26783944 - 26783896
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||| ||||||||||||||||||||||| |||||||| ||||||||    
T  26783944 taaggcctcgtttggattggcttattttgagcttatgtgggcttatcta 26783896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 10836964 - 10836913
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||| ||||||||||||||||||||||| |||||||| |||||||| ||||    
T  10836964 aggcctcgtttggattggcttattttgagcttatgtgggcttatctactccc 10836913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 13110406 - 13110453
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  13110406 cccgtttggattggcttattttgagcttatgtgggcttatctactccc 13110453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 14422697 - 14422752
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| ||||||||||||||||| |||||||||| |||||||| |||||||| ||||    
T  14422697 attatggccccgtttggattggtttattttgagcttatgtgggcttatctactccc 14422752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 22260839 - 22260788
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||  |||||||| ||||    
T  22260839 aggccccgtttggattggcttattttgagcttatgtgagcttatctactccc 22260788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 24113375 - 24113324
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  24113375 aggccccgtttggattgacttattttgagcttatgtgggcttatctactccc 24113324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 314 - 376
Target Start/End: Complemental strand, 33287139 - 33287076
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctc 376  Q
    ||||||| |||||||||| ||| ||||||||||||| ||||| ||||||||| |||||||||||    
T  33287139 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctc 33287076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 267
Target Start/End: Original strand, 29938060 - 29938102
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttat 267  Q
    |||||||||||||||||||||||||||| |||||||| |||||    
T  29938060 ggccccgtttggattggcttattttgagcttatgtgggcttat 29938102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 41575516 - 41575562
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||| |||||| |||||||||| ||||    
T  41575516 ccgtttggattggcttattttgagcttatgtagacttatctactccc 41575562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 6144484 - 6144431
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||| ||||||||||| |||| ||| |||||||| ||||    
T  6144484 taaggccccgtttggattgacttattttgagcttatatgggcttatctactccc 6144431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 260
Target Start/End: Original strand, 7791412 - 7791445
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||||||||||||||||||||||||||    
T  7791412 ccccgtttggattggcttattttgagtttatgtg 7791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 2042727 - 2042687
Alignment:
Q  230 cgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||| |||||||| ||||||||    
T  2042727 cgtttggattggcttattttgagcttatgtgggcttatcta 2042687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 7811993 - 7812029
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||| |||||||||||||||||||||||||    
T  7811993 aggccccgttttgattggcttattttgagtttatgtg 7812029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 4035841 - 4035896
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||| ||||||| || |||| ||| |||||||| ||||    
T  4035841 attaaggccccgtttggattggtttatttttagcttatatgggcttatctactccc 4035896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 260
Target Start/End: Original strand, 5320563 - 5320598
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtg 260  Q
    |||||||||||||||||||||||||||| |||||||    
T  5320563 ggccccgtttggattggcttattttgagcttatgtg 5320598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 8021721 - 8021768
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  8021721 cccgtttggattggcttattttgagcttatatgggcttatctactccc 8021768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 33287234 - 33287183
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||| ||||||||||| ||||||||  ||||||| ||||    
T  33287234 aggccccgtttggattgacttattttgagcttatgtgggtttatctactccc 33287183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Complemental strand, 66384 - 66338
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||| |||||||||||||||||||| ||| | |||||||||||||    
T  66384 ccgtttagattggcttattttgagtttctgtaggcttatctattccc 66338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 144397 - 144443
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||| |||||||||||  |||||||||||||||| ||||    
T  144397 ccgtttggattgacttattttgagcatatgtggacttatctactccc 144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 314 - 411
Target Start/End: Original strand, 8021812 - 8021902
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |        |||||||||||||||||||||||| ||||| ||||||    
T  8021812 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttca--------tccggcttaacaaggagcttatgagtttatataacct 8021902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 2322223 - 2322175
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||  ||| |||| |||| |||||||    
T  2322223 taaggccccgtttggattggcttattcggagcttatatggatttatcta 2322175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 34679659 - 34679615
Alignment:
Q  231 gtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||| |||| ||| |||||||| ||||    
T  34679659 gtttggattggcttattttgagcttatatgggcttatctactccc 34679615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 40117967 - 40117903
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctc 376  Q
    |||||||| |||||||||| ||| |||| ||||||||| ||||  |||||||| |||||||||||    
T  40117967 cttatcatagtttcataagctgcttatgtcatattttaataagcttaaattttcagcttaccctc 40117903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 42571598 - 42571638
Alignment:
Q  230 cgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||| ||||||||  |||||||    
T  42571598 cgtttggattggcttattttgagcttatgtgggtttatcta 42571638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 5e-35; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 18806999 - 18806896
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18806999 cttatcatagtttcataagctgcttatgctatattttaataagcctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 18806900  T
Q  412 cctt 415  Q
    ||||    
T  18806899 cctt 18806896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 26323301 - 26323201
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26323301 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 26323202  T
Q  412 c 412  Q
    |    
T  26323201 c 26323201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 33906162 - 33906059
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  33906162 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaagaaggagcttatgaatttatgtaacct 33906063  T
Q  412 cctt 415  Q
    ||||    
T  33906062 cctt 33906059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 19384049 - 19383947
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||  |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19384049 ttatcatagtttcataagttgtttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 19383950  T
Q  413 ctt 415  Q
    |||    
T  19383949 ctt 19383947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 3873359 - 3873259
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  3873359 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatataacct 3873260  T
Q  412 c 412  Q
    |    
T  3873259 c 3873259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 851087 - 851190
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||||  ||| ||||| ||| |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  851087 cttatcataattttataagctgcttatgccatattttaataagcttaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 851186  T
Q  412 cctt 415  Q
    ||||    
T  851187 cctt 851190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 2178884 - 2178781
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  2178884 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctgacttaacaaggagcttatgaatttatgtaacct 2178785  T
Q  412 cctt 415  Q
    ||||    
T  2178784 cctt 2178781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 5733489 - 5733592
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  5733489 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgcaacct 5733588  T
Q  412 cctt 415  Q
    ||||    
T  5733589 cctt 5733592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 31517330 - 31517227
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  31517330 cttatcatagtttcataaactgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaataaggagcttatgaatttatgtaacct 31517231  T
Q  412 cctt 415  Q
    ||||    
T  31517230 cctt 31517227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 315 - 415
Target Start/End: Original strand, 4016131 - 4016232
Alignment:
Q  315 tatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcc 413  Q
    |||||| |||||||||| ||| ||||||||||||||  ||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  4016131 tatcatagtttcataagctgcttatgccatattttaacaagcctaaattttcagcttacccttcggcttaacaaggagcttatgaatttatgtaacctcc 4016230  T
Q  414 tt 415  Q
    ||    
T  4016231 tt 4016232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 4232257 - 4232157
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||||||||||| | ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  4232257 cttatcatagtttcataagctgcttatgccatattttcacaagcctaaattttcagcttaccctccggcttaacaaagagcttatgaatttatgtaacct 4232158  T
Q  412 c 412  Q
    |    
T  4232157 c 4232157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 42937810 - 42937913
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatattttat--aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||| |||||||||| ||| ||||||||||||||   ||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  42937810 ttatcatagtttcataagctgcttatgccatattttaataaagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacct 42937909  T
Q  412 cctt 415  Q
    ||||    
T  42937910 cctt 42937913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 39635542 - 39635645
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| |||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||    
T  39635542 cttatcatagtttcataagctgcttatgtcatattttattaagcctaaattttcagcttaccctccggcttaacaacgagcttatcaatttatgtaacct 39635641  T
Q  412 cctt 415  Q
    ||||    
T  39635642 cctt 39635645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 407
Target Start/End: Original strand, 1108370 - 1108464
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgta 407  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  1108370 ttatcatagtttcataagttgcttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgta 1108464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 30270793 - 30270691
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||    
T  30270793 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttacccttcggcttaacaaggagcttatgaatttatgtaatctc 30270694  T
Q  413 ctt 415  Q
    |||    
T  30270693 ctt 30270691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 413
Target Start/End: Complemental strand, 16588891 - 16588790
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||| || |||||||||| ||| ||||||||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||    
T  16588891 cttattatagtttcataagctgcttatgccatattttcataagcctaaattttcagcttaccctccggcttaataaggagcttatgaattaatgtaacct 16588792  T
Q  412 cc 413  Q
    ||    
T  16588791 cc 16588790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 16066409 - 16066306
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| |  |||| ||||||||||||||||||||||||||    
T  16066409 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctgatttaataaggagcttatgaatttatgtaacct 16066310  T
Q  412 cctt 415  Q
    ||||    
T  16066309 cctt 16066306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 6174942 - 6174840
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||||||| || |||||    
T  6174942 ttatcatagtttcataagctgcttatgtcatatttcattaagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttacgtgacctc 6174843  T
Q  413 ctt 415  Q
    |||    
T  6174842 ctt 6174840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 1483018 - 1482915
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||| || |||||||||| ||| |||||||||||||| |||| ||||||||| || ||||||| || |||||||||||||||||||||||||||||| |    
T  1483018 cttattattgtttcataagctgcttatgccatattttaataagcctaaattttcagtttacccttcgacttaacaaggagcttatgaatttatgtaacat 1482919  T
Q  412 cctt 415  Q
    ||||    
T  1482918 cctt 1482915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 19901253 - 19901153
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||||||||||| | |||| ||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||    
T  19901253 cttatcatagtttcataaactgcttatgccatatttcaataagcctaaattttcagcccacccttcggcttaacaaggagcttatgaatttatgtaacct 19901154  T
Q  412 c 412  Q
    |    
T  19901153 c 19901153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 28329952 - 28329851
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||||||||||||| |||| ||||||||| ||||||||||   |||||||||||||| ||||||||||||||||||    
T  28329952 cttatcatagtttcataaactgcttatgccatattttaataagcctaaattttcagcttacccta--gcttaacaaggagcatatgaatttatgtaacct 28329855  T
Q  412 cctt 415  Q
    ||||    
T  28329854 cctt 28329851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 44947656 - 44947561
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatattttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcc 413  Q
    ||||||| |||||||||| ||| ||||||||||||       ||||||||| || |||||||||||||||||||| || |||||||||||||||||||||    
T  44947656 ttatcatagtttcataagctgcttatgccatatttg------ctaaattttcagtttaccctccggcttaacaagaagtttatgaatttatgtaacctcc 44947563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 429906 - 430006
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||||  ||||||||| ||| ||||| |||||||| |||| ||||||||| | |||||  | || ||||||||||||||||||||||||||||||||    
T  429906 cttatcataatttcataagttgcttatgcgatattttaataagcctaaattttcaacttacaattcgacttaacaaggagcttatgaatttatgtaacct 430005  T
Q  412 c 412  Q
    |    
T  430006 c 430006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Complemental strand, 19901353 - 19901300
Alignment:
Q  217 tatattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  19901353 tatattaaggccccgtttggattggcttattttgagcttatgtgggcttctcta 19901300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 26323397 - 26323344
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  26323397 taaggccccgtttggattggtttattttgagcttatgtggacttatctactccc 26323344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 39635448 - 39635499
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  39635448 aggccccgtttggattagcttattttgagcttatgtggacttatctactccc 39635499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 224 - 273
Target Start/End: Complemental strand, 2178978 - 2178929
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattc 273  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  2178978 aggccccgtttggattgatttattttaagtttatgtggacttatctattc 2178929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 275
Target Start/End: Complemental strand, 30420373 - 30420325
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  30420373 ccccgtttggattggcttattttgagcttatgtgggcttatctactccc 30420325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 219 - 270
Target Start/End: Complemental strand, 4232356 - 4232305
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| ||||||||||||||||||||||||||| | |||||||| ||||||||    
T  4232356 tattgaggccccgtttggattggcttattttgtgcttatgtgggcttatcta 4232305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 16588985 - 16588939
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| |||||||||||||||||||||| |||||||||| ||||||||    
T  16588985 aggctccgtttggattggcttattttgtgtttatgtgggcttatcta 16588939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 31517423 - 31517373
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  31517423 ggccccgtttggattggcttattttgagcttatttgggcttatctactccc 31517373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 1108274 - 1108326
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||||| ||||    
T  1108274 taaggccccgtttggat-ggcttattttgagcttatgtgggcttatctactccc 1108326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 225 - 270
Target Start/End: Complemental strand, 3873452 - 3873407
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||    
T  3873452 ggcctcgtttggattggcttattttgagcttatgtgggcttatcta 3873407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 6175037 - 6175001
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||||||||||||||||||||| |||||||    
T  6175037 aggccccgtttggattggcttattttgagcttatgtg 6175001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 379 - 415
Target Start/End: Complemental strand, 30420227 - 30420191
Alignment:
Q  379 gcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||||||||||||||||||||||||||||||| ||||    
T  30420227 gcttaacaaggagcttatgaatttatgtaaccccctt 30420191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 18807093 - 18807047
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||| ||  ||||||||    
T  18807093 aggccccgtttggattggcttattttgagcttatatgagcttatcta 18807047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 28330042 - 28330000
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||    
T  28330042 cccgtttggattgacttattttgagcttatgtgggcttatcta 28330000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 42446778 - 42446732
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||  ||||||||| | |||||||||    
T  42446778 aggccccgtttggattggcttattcggagtttatgcgaacttatcta 42446732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 1483106 - 1483065
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||| ||||||||||||||||| |||||||| ||||||||    
T  1483106 ccgttttgattggcttattttgagcttatgtgggcttatcta 1483065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 260
Target Start/End: Original strand, 4016039 - 4016071
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||||||||||||||||| |||||||    
T  4016039 cccgtttggattggcttattttgagcttatgtg 4016071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 42937715 - 42937751
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtg 260  Q
    |||| |||||||||||||||||||||||| |||||||    
T  42937715 aggctccgtttggattggcttattttgagcttatgtg 42937751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 5e-35; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 19715276 - 19715173
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19715276 cttatcattgtttcataagctgcttatgtcatattttaataagcctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 19715177  T
Q  412 cctt 415  Q
    ||||    
T  19715176 cctt 19715173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 33510575 - 33510677
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33510575 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 33510674  T
Q  413 ctt 415  Q
    |||    
T  33510675 ctt 33510677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 1168593 - 1168704
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||    
T  1168593 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagtttatgaatttatgtaatct 1168692  T
Q  412 cctttgcttctc 423  Q
    |||||| |||||    
T  1168693 cctttgattctc 1168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 12682910 - 12683013
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttt-ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  12682910 cttatcatagtttcataagctgcttatgccatattttcataagcctaaatctttagcttaccctccggcttaacaagaagcttatgaatttatgtaacct 12683009  T
Q  412 cctt 415  Q
    ||||    
T  12683010 cctt 12683013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 16052186 - 16052289
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16052186 cttatcatagtttcataagctgcttatgccatattttaataagcctgaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 16052285  T
Q  412 cctt 415  Q
    ||||    
T  16052286 cctt 16052289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 25897464 - 25897567
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  25897464 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 25897563  T
Q  412 cctt 415  Q
    ||||    
T  25897564 cctt 25897567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 39260461 - 39260358
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39260461 cttatcatagtttcataagttgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 39260362  T
Q  412 cctt 415  Q
    ||||    
T  39260361 cctt 39260358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 52696881 - 52696984
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  52696881 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaaggagcttatgaatttatgtaacct 52696980  T
Q  412 cctt 415  Q
    ||||    
T  52696981 cctt 52696984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 7145298 - 7145400
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  7145298 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacctc 7145397  T
Q  413 ctt 415  Q
    |||    
T  7145398 ctt 7145400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 313 - 413
Target Start/End: Original strand, 38829159 - 38829260
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| | |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38829159 cttatcatagtttcataagctgcttgtgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 38829258  T
Q  412 cc 413  Q
    ||    
T  38829259 cc 38829260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 5215475 - 5215578
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  5215475 cttatcatagtttcataagttgcttatgccatattttaataagcctaaattttcagcttaacttccggcttaacaaggagcttatgaatttatgtaacct 5215574  T
Q  412 cctt 415  Q
    ||||    
T  5215575 cctt 5215578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 17591778 - 17591881
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  17591778 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaatttccagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 17591877  T
Q  412 cctt 415  Q
    ||||    
T  17591878 cctt 17591881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 20089561 - 20089664
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  20089561 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 20089660  T
Q  412 cctt 415  Q
    ||||    
T  20089661 cctt 20089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 26580385 - 26580282
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  26580385 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttctggcttaacaaggagcttatgaatttatgtaacct 26580286  T
Q  412 cctt 415  Q
    ||||    
T  26580285 cctt 26580282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 26663348 - 26663451
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||||||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  26663348 cttatcatagtttcataagctgtttatgccatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacct 26663447  T
Q  412 cctt 415  Q
    ||||    
T  26663448 cctt 26663451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 29078606 - 29078709
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29078606 cttatcatagtttcataagctgcttatgccatattttaataaacctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 29078705  T
Q  412 cctt 415  Q
    ||||    
T  29078706 cctt 29078709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 42370910 - 42370807
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| | || ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42370910 cttatcatagtttcataagctgcttgtgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 42370811  T
Q  412 cctt 415  Q
    ||||    
T  42370810 cctt 42370807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 43905744 - 43905847
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||    
T  43905744 cttatcatagtttcataagctgcttatgccatattttaataagcctaaatttttagtttaccctccggcttaagaaggagcttatgaatttacgtaacct 43905843  T
Q  412 cctt 415  Q
    ||||    
T  43905844 cctt 43905847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 46761056 - 46761159
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  46761056 cttatcatagtttcataaactgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaactt 46761155  T
Q  412 cctt 415  Q
    ||||    
T  46761156 cctt 46761159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 51359332 - 51359229
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  51359332 cttatcatagtttcataaggtgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaggagtttatgaatttatgtaacct 51359233  T
Q  412 cctt 415  Q
    ||||    
T  51359232 cctt 51359229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 2347747 - 2347850
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttt--ataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||| |||||||||| ||| |||| ||||||||  ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  2347747 ttatcatagtttcataagctgcttatgtcatatttttaataagcctaaattttcagcttaccctccggcttaacaatgagcttatgaatttatgtaacct 2347846  T
Q  412 cctt 415  Q
    ||||    
T  2347847 cctt 2347850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 13996838 - 13996738
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||| ||||||||||||| ||| |||||||||||||| |||| ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||    
T  13996838 cttataatggtttcataagctgcttatgccatattttaataagcctaaattttcaacttaccctccggcttaacaaggagtttatgaatttatgtaacct 13996739  T
Q  412 c 412  Q
    |    
T  13996738 c 13996738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 1170559 - 1170456
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  1170559 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccatccggcttaacaaggagtttatgaatttatgtaacct 1170460  T
Q  412 cctt 415  Q
    ||||    
T  1170459 cctt 1170456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 1940862 - 1940759
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||| ||||||||| |||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  1940862 cttatcatagtttcataagttgtttatgtcatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacct 1940763  T
Q  412 cctt 415  Q
    ||||    
T  1940762 cctt 1940759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 317 - 415
Target Start/End: Original strand, 15717878 - 15717977
Alignment:
Q  317 tcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||| |||||||||| ||| ||||||||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15717878 tcatagtttcataagctgcttatgccataatttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgattttatgtaacctcctt 15717977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 17587620 - 17587517
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||||  ||||||||| ||| |||||||||||||| |||| ||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||    
T  17587620 cttatcatattttcataagctgcttatgccatattttaataagcctaaattttcagcttacactctggcttaacaaggagcttatgaatttatgtaacct 17587521  T
Q  412 cctt 415  Q
    ||||    
T  17587520 cctt 17587517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 40092581 - 40092680
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  40092581 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttatcttccggcttaacaaggagcttatgaatttatgtaacct 40092680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 52753262 - 52753159
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| | | |||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  52753262 cttatcatagtttcataagctacttatgccatattttaataagcctaaattttcagcttaccatctggcttaacaaggagcttatgaatttatgtaacct 52753163  T
Q  412 cctt 415  Q
    ||||    
T  52753162 cctt 52753159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 41928609 - 41928511
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatattttat-aagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||| |||||||||| ||| ||||||||||||||  ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  41928609 ttatcatagtttcataagctgcttatgccatattttaacaagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 41928511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 423
Target Start/End: Complemental strand, 8079824 - 8079713
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| | | |||||||||||||| |||| |||| |||| ||||||||||| |||||||||||||| |||||||||||||||| ||    
T  8079824 cttatcatagtttcataagctacttatgccatattttaataagcctaagttttcagcttaccctctggcttaacaaggagtttatgaatttatgtaatct 8079725  T
Q  412 cctttgcttctc 423  Q
    |||||| |||||    
T  8079724 cctttgattctc 8079713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 29288240 - 29288340
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||  |||||||||||    
T  29288240 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaa--tatgtaacctc 29288337  T
Q  413 ctt 415  Q
    |||    
T  29288338 ctt 29288340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 32671669 - 32671772
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| | | |||||||||||||| |||| ||||||||| | |||||||| ||||||||||||||||||||||||||||||||||     
T  32671669 cttatcatagtttcataagctacttatgccatattttaataagcctaaattttcaacttacccttcggcttaacaaggagcttatgaatttatgtaaccc 32671768  T
Q  412 cctt 415  Q
    ||||    
T  32671769 cctt 32671772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 970630 - 970536
Alignment:
Q  322 gtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||||||||| ||| |||||||||||||| |||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  970630 gtttcataagctgcttatgccatattttaataaacctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaatctcctt 970536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 8120960 - 8121062
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| ||||  |||||||| || ||||| ||||||||||||||||||||||||||||||||||||||    
T  8120960 ttatcatagtttcataagctgcttatgtcatattttaataagcttaaattttcagtttaccttccggcttaacaaggagcttatgaatttatgtaacctc 8121059  T
Q  413 ctt 415  Q
    |||    
T  8121060 ctt 8121062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 338 - 415
Target Start/End: Complemental strand, 15554242 - 15554164
Alignment:
Q  338 atgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15554242 atgccatattttaataagcctaaattttcaacttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 15554164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 40149554 - 40149656
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||| ||||| ||| |||| ||||||||| |||| ||||||||| || |||||||||| |||||||||||||||||||||||||||||||||    
T  40149554 ttatcatagttttataagctgcttatgtcatattttaataagcctaaattttcagtttaccctccgacttaacaaggagcttatgaatttatgtaacctc 40149653  T
Q  413 ctt 415  Q
    |||    
T  40149654 ctt 40149656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 316 - 412
Target Start/End: Original strand, 23498553 - 23498650
Alignment:
Q  316 atcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||| |||||||||| ||| |||  ||||||||| |||| ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  23498553 atcatagtttcataagttgcttatatcatattttaataagcctaaattttcagcttaccctccgacttaacaaggagcttatgaatttatgtaacctc 23498650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 313 - 409
Target Start/End: Original strand, 49146262 - 49146359
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaac 409  Q
    |||||||| |||||||||| ||| |||||||||||| | |||| ||||||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  49146262 cttatcatagtttcataagctgcttatgccatatttcaataagcctaaattttcatcttaccctccggcttaacaaagagcttatgaatttatgtaac 49146359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 15203202 - 15203301
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||||||||||| | |||| ||||||||| |||  |||||||||||||||||||||||||||||||||||||||||    
T  15203202 cttatcatagtttcataagctgtttatgccatatttcaataagcctaaattttcagccaaccctccggcttaacaaggagcttatgaatttatgtaacct 15203301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 6765550 - 6765652
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||  |||||| || ||| |||| ||||||||| |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||    
T  6765550 ttatcatattttcatgagctgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagtttatgaatttatgtaatctc 6765649  T
Q  413 ctt 415  Q
    |||    
T  6765650 ctt 6765652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 2473812 - 2473915
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||| || |||||||||| ||| |||| ||||||| | |||| ||||||||| ||||||||||||  ||||||||||||||||||||||||||| ||||    
T  2473812 cttattatagtttcataagctgcttatgtcatatttcaataagcctaaattttcagcttaccctcctacttaacaaggagcttatgaatttatgttacct 2473911  T
Q  412 cctt 415  Q
    ||||    
T  2473912 cctt 2473915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 46409525 - 46409630
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggc--ttaacaaggagcttatgaatttatgtaac 409  Q
    |||||||| |||||||||| ||| |||||||||||| | |||| ||||||||| |||||||||| || |  |||||||||||||||||||||||||| ||    
T  46409525 cttatcatagtttcataagctgcttatgccatatttcaataagcctaaattttcagcttacccttcgacaattaacaaggagcttatgaatttatgtgac 46409624  T
Q  410 ctcctt 415  Q
    ||||||    
T  46409625 ctcctt 46409630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 16052090 - 16052138
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16052090 taaggccccgtttggattggcttattttgagtttatgtgggcttatcta 16052138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 20089463 - 20089518
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  20089463 attaaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 20089518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 26580479 - 26580428
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  26580479 aggccccgtttggattggcttattttgagcttatgtgggcttatctattccc 26580428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 356 - 415
Target Start/End: Original strand, 38171953 - 38172012
Alignment:
Q  356 ctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||    
T  38171953 ctaaattttcagcttatcctccggcttaagaatgagcttatgaatttatgtaacctcctt 38172012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 6765448 - 6765501
Alignment:
Q  217 tatattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | |||||||    
T  6765448 tatattaagaccccgtttggattggcttattttgagtttatgtgaatttatcta 6765501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 32671573 - 32671626
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||    
T  32671573 taaggccccgtttggattggcttattttgagcttatgtggatttatctactccc 32671626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 1168499 - 1168550
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  1168499 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 1168550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 26663250 - 26663305
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  26663250 attaagaccccgtttggattggcttattttgagcttatgtgggcttatctactccc 26663305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 314 - 388
Target Start/End: Original strand, 29695767 - 29695842
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaag 388  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||| |||||||||    
T  29695767 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctccgacttaacaag 29695842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 39260555 - 39260504
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  39260555 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 39260504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 52753356 - 52753305
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  52753356 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 52753305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 41928704 - 41928658
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||    
T  41928704 aggccccgtttggattggcttattttgaacttatgtggacttatcta 41928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 8120870 - 8120911
Alignment:
Q  229 ccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  8120870 ccgtttggattggcttattttgagcttatgtggacttatcta 8120911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 46409428 - 46409477
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||| |||||||||||| ||||||||||| |||||||||||||||||    
T  46409428 ttaaggctccgtttggattgacttattttgagcttatgtggacttatcta 46409477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 270
Target Start/End: Original strand, 52696788 - 52696833
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||    
T  52696788 ggccccgtttggattggcttattttgagcttatgtgggcttatcta 52696833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 1940956 - 1940905
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  1940956 aggccccgtttggattggcttattttgagcttatatgggcttatctactccc 1940905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 270
Target Start/End: Original strand, 5215384 - 5215427
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||||||| |||||||| ||||||||    
T  5215384 ccccgtttggattggcttattttgagcttatgtgggcttatcta 5215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 220 - 275
Target Start/End: Original strand, 12682812 - 12682867
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| ||||| |||||||||| |||||||||||||||||||| |||||||| ||||    
T  12682812 attagggccctgtttggattgacttattttgagtttatgtgggcttatctactccc 12682867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 29288145 - 29288196
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  29288145 aggccccgtttggattgacttattttgagcttatgtgggcttatctactccc 29288196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 970734 - 970684
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||| ||||||||||| |||||||| |||||||| ||||    
T  970734 ggccccgtttggattgacttattttgagcttatgtgggcttatctactccc 970684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 1170653 - 1170607
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| || ||||| ||||||||    
T  1170653 aggccccgtttggattggcttattttgagcttttgtgggcttatcta 1170607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 270
Target Start/End: Complemental strand, 8079914 - 8079872
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||| |||||||| ||||||||    
T  8079914 cccgtttggattggcttattttgagcttatgtgggcttatcta 8079872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 29078519 - 29078563
Alignment:
Q  231 gtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||| |||||||| |||||||| ||||    
T  29078519 gtttggattggcttattttgagcttatgtgggcttatctactccc 29078563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 33510475 - 33510531
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| ||||||||||||||||||||||||||||| |||| ||  |||||||| ||||    
T  33510475 tatttaggccccgtttggattggcttattttgagcttatatgagcttatctactccc 33510531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 2347652 - 2347703
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||| | |||||||||||||||| || |||||||| ||||    
T  2347652 aggccccgtttggatttgtttattttgagtttatgcgggcttatctactccc 2347703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 5675097 - 5675136
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgt 259  Q
    |||||||||||||||||||||||||||||| || ||||||    
T  5675097 attaaggccccgtttggattggcttattttaagcttatgt 5675136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 25897370 - 25897421
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||| ||||||||||| |||||||| | |||||| ||||    
T  25897370 aggccccgtttggattgacttattttgagcttatgtgggcatatctactccc 25897421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 270
Target Start/End: Original strand, 43905649 - 43905696
Alignment:
Q  223 aaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||||||||    
T  43905649 aaggctccgtttggattggcttattttgagcttatttgggcttatcta 43905696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 38829061 - 38829111
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||| | |||||||||||||||||||||| |||||| | ||||||||    
T  38829061 attaaggctctgtttggattggcttattttgagcttatgtcggcttatcta 38829111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 42371003 - 42370953
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||| ||||    
T  42371003 ggccccgtttggattgacttattttgagcttatgtgagcttatctactccc 42370953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 51359424 - 51359382
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttat 267  Q
    |||||||||||||||||||||||||||| ||||| || |||||    
T  51359424 ggccccgtttggattggcttattttgagcttatgcgggcttat 51359382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 13996934 - 13996881
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||| |||||||||||||||||||||  ||||||||  ||||||| ||||    
T  13996934 taaggccctgtttggattggcttattttgaaattatgtgggtttatctactccc 13996881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 29695673 - 29695722
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||| |||||||||||||||||||||| ||| |||| |||||||| ||||    
T  29695673 gccctgtttggattggcttattttgagcttacgtgggcttatctactccc 29695722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 49146166 - 49146211
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttat 267  Q
    |||||| ||||||||||||| |||||||||| ||||||||| ||||    
T  49146166 taaggctccgtttggattggtttattttgagcttatgtggatttat 49146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 15717776 - 15717816
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgt 259  Q
    |||||||| | ||||||||||| ||||||||||||||||||    
T  15717776 tattaaggtctcgtttggattgacttattttgagtttatgt 15717816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 8042695 - 8042797
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8042695 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 8042794  T
Q  413 ctt 415  Q
    |||    
T  8042795 ctt 8042797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 313 - 412
Target Start/End: Original strand, 38856180 - 38856280
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38856180 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 38856279  T
Q  412 c 412  Q
    |    
T  38856280 c 38856280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 22175091 - 22174988
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  22175091 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaaggagcttatgaatttatgtaacct 22174992  T
Q  412 cctt 415  Q
    ||||    
T  22174991 cctt 22174988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 54870275 - 54870172
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54870275 cttatcatcgtttcataagctgcttatgtcatattttaataagcctaaatttttagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 54870176  T
Q  412 cctt 415  Q
    ||||    
T  54870175 cctt 54870172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 32244208 - 32244310
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| ||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  32244208 ttatcatagtttcataagctgcttatgccatattttaataagcttaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 32244307  T
Q  413 ctt 415  Q
    |||    
T  32244308 ctt 32244310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 46452262 - 46452160
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  46452262 ttatcatagtttcataagttgcttatgccatattttaataagcctaaattttcagctcaccctccggcttaacaaggagcttatgaatttatgtaacctc 46452163  T
Q  413 ctt 415  Q
    |||    
T  46452162 ctt 46452160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 48925103 - 48925001
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||  |||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48925103 ttatcatagtttcataagctgtttatgtcatattttaataagtctaaatttttagcttatcctccggcttaacaaggagcttatgaatttatgtaacctc 48925004  T
Q  413 ctt 415  Q
    |||    
T  48925003 ctt 48925001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 15520243 - 15520143
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||  ||| |||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15520243 cttatcatcgtttcataaactgcttatgccatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 15520144  T
Q  412 c 412  Q
    |    
T  15520143 c 15520143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 42308006 - 42307906
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  42308006 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 42307907  T
Q  412 c 412  Q
    |    
T  42307906 c 42307906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 15520723 - 15520826
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  15520723 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaaggagcttatgaatttttgtaacct 15520822  T
Q  412 cctt 415  Q
    ||||    
T  15520823 cctt 15520826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 20842449 - 20842346
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||  ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20842449 cttatcatagtttcataagctgcttatatcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 20842350  T
Q  412 cctt 415  Q
    ||||    
T  20842349 cctt 20842346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 25494386 - 25494283
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||    
T  25494386 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctcctgcttaacaaggagcttatgaatttatgcaacct 25494287  T
Q  412 cctt 415  Q
    ||||    
T  25494286 cctt 25494283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 411
Target Start/End: Original strand, 25999475 - 25999574
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  25999475 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 25999574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 29445575 - 29445678
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||  |||||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29445575 cttatcatagtttcataagctgtttatgccctattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 29445674  T
Q  412 cctt 415  Q
    ||||    
T  29445675 cctt 29445678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 35226534 - 35226637
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||    
T  35226534 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccagcctaacaaggagcttatgaatttatgtaacct 35226633  T
Q  412 cctt 415  Q
    ||||    
T  35226634 cctt 35226637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 37698244 - 37698141
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  37698244 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 37698145  T
Q  412 cctt 415  Q
    ||||    
T  37698144 cctt 37698141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 38934032 - 38934135
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  38934032 cttatcatagtttcataagctgcttatgtcatattttaataagtctaaatttccagtttaccctccggcttaacaaggagcttatgaatttatgtaacct 38934131  T
Q  412 cctt 415  Q
    ||||    
T  38934132 cctt 38934135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 50529016 - 50529119
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  50529016 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaaggagtttatgaatttatgtaacct 50529115  T
Q  412 cctt 415  Q
    ||||    
T  50529116 cctt 50529119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 32359347 - 32359449
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||    
T  32359347 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaagagcttatgaatttatgtaacctc 32359446  T
Q  413 ctt 415  Q
    |||    
T  32359447 ctt 32359449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 54534427 - 54534326
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||||||||| ||||| ||| |||||||||||  ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  54534427 cttatcatggttt-ataagctgcttatgccatattcaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtgacctc 54534329  T
Q  413 ctt 415  Q
    |||    
T  54534328 ctt 54534326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 313 - 412
Target Start/End: Complemental strand, 44609434 - 44609334
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  44609434 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaaggagtttatgaatttatgtaacct 44609335  T
Q  412 c 412  Q
    |    
T  44609334 c 44609334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 20699236 - 20699339
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| ||||||||||||||||||||| |||||| ||||||||    
T  20699236 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccttccggcttaacaaggagcttaggaatttttgtaacct 20699335  T
Q  412 cctt 415  Q
    ||||    
T  20699336 cctt 20699339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 21581129 - 21581232
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||| |    
T  21581129 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccatctggcttaacaaggagcttatgaatttatgtaacat 21581228  T
Q  412 cctt 415  Q
    ||||    
T  21581229 cctt 21581232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 24835800 - 24835697
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||| || |||||||||| ||| |||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  24835800 cttattatagtttcataagctgcttatgccatatttcaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaaact 24835701  T
Q  412 cctt 415  Q
    ||||    
T  24835700 cctt 24835697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 53028304 - 53028407
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    ||||||||  ||||||||  ||| |||| ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53028304 cttatcatattttcataaactgcttatgtcatattttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 53028403  T
Q  412 cctt 415  Q
    ||||    
T  53028404 cctt 53028407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 42105071 - 42104969
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||    
T  42105071 ttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctcatgcttaacaaggagcttatgaatttatgtaacctc 42104972  T
Q  413 ctt 415  Q
    |||    
T  42104971 ctt 42104969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 313 - 417
Target Start/End: Original strand, 34700428 - 34700533
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| |||||||||||| |||||||||||||||| ||| ||||||||||||||| ||||||    
T  34700428 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaatttttagtttaccctccggcttaagaagaagcttatgaatttatataacct 34700527  T
Q  412 cctttg 417  Q
    ||||||    
T  34700528 cctttg 34700533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 314 - 412
Target Start/End: Complemental strand, 12117758 - 12117659
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  12117758 ttatcatagtttcataagttgcttatgtcatattttaataagcctaaattttcagcttaccatctggcttaacaaggagcttatgaatttatgtaacctc 12117659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 13696913 - 13696991
Alignment:
Q  345 attttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctttgcttctc 423  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  13696913 atttaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttgtgtaacctcctttgattctc 13696991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 313 - 414
Target Start/End: Original strand, 16354433 - 16354535
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| |||  ||||||| ||||| |||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||    
T  16354433 cttatcatagtttcataagctgctaatgccatgttttaataagcctaaattttcagcttatcctcctgcttaacaaggagcttatgaatttatgtaacct 16354532  T
Q  412 cct 414  Q
    |||    
T  16354533 cct 16354535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 340 - 415
Target Start/End: Original strand, 24366143 - 24366219
Alignment:
Q  340 gccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    ||||||||||| ||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24366143 gccatattttaataagcataaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 24366219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 44688848 - 44688950
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| ||||| |||||||| ||||  |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||    
T  44688848 cttatcatagtttcataagctgcttatgc-atattttaataagcttaaattttcagcttaccctccggcttaacaatgagcttatgaatttatgcaacct 44688946  T
Q  412 cctt 415  Q
    ||||    
T  44688947 cctt 44688950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 2895273 - 2895379
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagct----tatgaatttatgtaa 408  Q
    ||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||    ||||||||||| |||    
T  2895273 ttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatatatgaatttatataa 2895372  T
Q  409 cctcctt 415  Q
    |||||||    
T  2895373 cctcctt 2895379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 313 - 409
Target Start/End: Original strand, 26122901 - 26122998
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaac 409  Q
    |||||||| |||||||||| ||| |||| ||||||| | |||| ||||||||| |||||| |||||||||||||||| |||||||||||||| |||||    
T  26122901 cttatcatagtttcataagctgcttatgtcatatttcaataagcctaaattttcagcttatcctccggcttaacaagtagcttatgaatttacgtaac 26122998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 12117858 - 12117802
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||    
T  12117858 tattaaggccccgtttgaattggcttattttgagcttatgtgggcttatctattccc 12117802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 220 - 275
Target Start/End: Complemental strand, 15520341 - 15520286
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  15520341 attaaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 15520286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 222 - 275
Target Start/End: Complemental strand, 42308102 - 42308049
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  42308102 taaggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 42308049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 37698338 - 37698287
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  37698338 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 37698287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 50528917 - 50528968
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  50528917 tatttaggccccgtttggattggcttattttgagcttatgtgggcttatcta 50528968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 54534521 - 54534470
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  54534521 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 54534470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 22175185 - 22175139
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||    
T  22175185 aggccccgtttggattggcttattttgagcttatgtgggcttatcta 22175139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 220 - 270
Target Start/End: Original strand, 25999377 - 25999427
Alignment:
Q  220 attaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||| |||||||||||||||||||||||||||| |||||||| ||||||||    
T  25999377 attatggccccgtttggattggcttattttgagcttatgtgggcttatcta 25999427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 222 - 272
Target Start/End: Original strand, 32359250 - 32359300
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatctatt 272  Q
    ||||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  32359250 taaggtcccgtttggattggcttattttgagcttatgtggatttatctatt 32359300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 54870369 - 54870323
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||    
T  54870369 aggccccgtttggattggcttattttgagtttatgtgggtttatcta 54870323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 8042593 - 8042646
Alignment:
Q  217 tatattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||| ||||||||||||| |||||||  ||||||||    
T  8042593 tatattaaggccccgtttggatgggcttattttgagcttatgtgagcttatcta 8042646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 221 - 270
Target Start/End: Original strand, 32244110 - 32244159
Alignment:
Q  221 ttaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  32244110 ttaaggtcccgtttggattggcttattttgagcttatgtggatttatcta 32244159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 20699144 - 20699188
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||    
T  20699144 gccccgtttggattggcttattttgagcttatgtgggcttatcta 20699188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 270
Target Start/End: Complemental strand, 20842545 - 20842497
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  20842545 taaggccccgtttggattggcttattttgagcttatgtgagcttatcta 20842497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 231 - 275
Target Start/End: Complemental strand, 50529961 - 50529917
Alignment:
Q  231 gtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||    
T  50529961 gtttggattgacttattttgagtttatgtggacttatctactccc 50529917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 25494488 - 25494429
Alignment:
Q  216 ttatattaaggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||| || |||||||||||||||| ||||||||||| ||||||||  ||||||||||||    
T  25494488 ttatactatggccccgtttggattgacttattttgagcttatgtgggtttatctattccc 25494429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 38933939 - 38933989
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  38933939 aggccccgtttggattggcttattttgagcttatgtgg-cttatctactccc 38933989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 231 - 270
Target Start/End: Complemental strand, 44609521 - 44609482
Alignment:
Q  231 gtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  44609521 gtttggattggcttattttgagcttatgtggacttatcta 44609482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 53028218 - 53028269
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||| |||||||||| ||||||||||| |||||||| |||||||||||||    
T  53028218 aggccctgtttggattgacttattttgagcttatgtgggcttatctattccc 53028269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 15520629 - 15520675
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||||    
T  15520629 aggccccgtttggattggcttattttgagcttatgtgggtttatcta 15520675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 275
Target Start/End: Original strand, 26122808 - 26122858
Alignment:
Q  225 ggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||| |||||||||||||||||||||| ||||||||  ||||||||||||    
T  26122808 ggcccagtttggattggcttattttgagcttatgtgggtttatctattccc 26122858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 313 - 377
Target Start/End: Original strand, 35643304 - 35643369
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctcc 377  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||    
T  35643304 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttgagcttaccctcc 35643369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 379 - 412
Target Start/End: Complemental strand, 50528916 - 50528883
Alignment:
Q  379 gcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||||||||||||||||||||||||||||||    
T  50528916 gcttaacaaggagcttatgaatttatgtaacctc 50528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 29445481 - 29445517
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||||||||||||||||||||| |||||||    
T  29445481 aggccccgtttggattggcttattttgagcttatgtg 29445517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 35226440 - 35226488
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctatt 272  Q
    |||||| |||||||||||| ||||||||| |||||||| ||||||||||    
T  35226440 aggccctgtttggattggcctattttgagcttatgtgggcttatctatt 35226488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 35643212 - 35643256
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||    
T  35643212 gccccgtttggattgacttattttgagcttatgtgaacttatcta 35643256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 275
Target Start/End: Original strand, 38856089 - 38856137
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  38856089 ccccgtttggattggcttattttgagcttatatgggcttatctactccc 38856137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 49128037 - 49128088
Alignment:
Q  219 tattaaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||||||||| |||||||| |  |||||||| ||||||||    
T  49128037 tattaaggccccgtttggattgacttattttaaacttatgtgggcttatcta 49128088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 415
Target Start/End: Original strand, 12916042 - 12916096
Alignment:
Q  361 tttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctcctt 415  Q
    |||| |||||||||||||| |||| || ||| |||||||||||||||||| ||||    
T  12916042 ttttcagcttaccctccggtttaagaaagagtttatgaatttatgtaaccccctt 12916096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 231 - 275
Target Start/End: Original strand, 21581042 - 21581086
Alignment:
Q  231 gtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    |||||||||| ||||||||||| |||||||| |||||||| ||||    
T  21581042 gtttggattgacttattttgagcttatgtgggcttatctactccc 21581086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 24366083 - 24366131
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||| ||||||||| ||||||||||| ||||||||  |||||||    
T  24366083 taaggccccttttggattgacttattttgagcttatgtgggtttatcta 24366131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0920 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0920
Description:

Target: scaffold0920; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 313 - 423
Target Start/End: Original strand, 3800 - 3911
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  3800 cttatcatagtttcataagctgcttatgccatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacct 3899  T
Q  412 cctttgcttctc 423  Q
    | |||| |||||    
T  3900 cttttgattctc 3911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0920; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 226 - 270
Target Start/End: Original strand, 3708 - 3752
Alignment:
Q  226 gccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    |||||||||||||||| |||||||||  |||||||| ||||||||    
T  3708 gccccgtttggattggtttattttgaacttatgtgggcttatcta 3752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1777 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1777
Description:

Target: scaffold1777; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 121 - 18
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||||||||||||| |||  ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  121 cttatcatagtttcataagctgcttatgccatattttaataatcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 22  T
Q  412 cctt 415  Q
    ||||    
T  21 cctt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 415
Target Start/End: Original strand, 36795 - 36898
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  36795 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttaccctctggcttaacaaggagcttatgaatttatgtaacct 36894  T
Q  412 cctt 415  Q
    ||||    
T  36895 cctt 36898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 36701 - 36752
Alignment:
Q  224 aggccccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||| ||||    
T  36701 aggccccgtttggattggcttattttgagcttatgtgggcttatctactccc 36752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 314 - 415
Target Start/End: Original strand, 10329 - 10431
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| ||| |||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  10329 ttatcatagtttcataagctgcttataccatattttaataagcctaaattttcagcttaccctccagcttaacaaggagcttatgaatttatgtaacctc 10428  T
Q  413 ctt 415  Q
    |||    
T  10429 ctt 10431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 222 - 270
Target Start/End: Original strand, 10232 - 10280
Alignment:
Q  222 taaggccccgtttggattggcttattttgagtttatgtggacttatcta 270  Q
    ||||||||||||||||||| ||||||||||| |||| |||  |||||||    
T  10232 taaggccccgtttggattgacttattttgagcttatatgggtttatcta 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 120 - 18
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatattttataagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    |||||||| |||||||| | ||| |||||||| ||  ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  120 cttatcatagtttcatatgctgcttatgccattttcaataagcctaaattttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 21  T
Q  413 ctt 415  Q
    |||    
T  20 ctt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 225 - 172
Alignment:
Q  215 attatattaaggccccgtttggattggcttattttgagtttatgtggacttatc 268  Q
    |||||||  ||| ||||||||||||| ||||||||||| |||||||||||||||    
T  225 attatatataggtcccgtttggattgacttattttgagcttatgtggacttatc 172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 64; Significance: 8e-28; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 313 - 415
Target Start/End: Complemental strand, 145360 - 145257
Alignment:
Q  313 cttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacct 411  Q
    |||||||| |||||||||| ||| |||| ||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  145360 cttatcatagtttcataagctgcttatgtcatattttaataagcctaaattttcagcttacccttcggcttaacaaggagcttataaatttatgtaacct 145261  T
Q  412 cctt 415  Q
    ||||    
T  145260 cctt 145257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 275
Target Start/End: Complemental strand, 145450 - 145403
Alignment:
Q  228 cccgtttggattggcttattttgagtttatgtggacttatctattccc 275  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  145450 cccgtttggattgacttattttgagtttatgtggacttatctactccc 145403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 314 - 415
Target Start/End: Complemental strand, 409 - 307
Alignment:
Q  314 ttatcatggtttcataagatgcatatgccatatttta-taagtctaaatttttagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 412  Q
    ||||||| |||||||||| ||| |||| ||||||| | ||||  |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  409 ttatcatagtttcataagctgcttatgtcatatttcaataagcttaaactttcagcttaccctccggcttaacaaggagcttatgaatttatgtaacctc 310  T
Q  413 ctt 415  Q
    |||    
T  309 ctt 307  T

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Target: scaffold0482; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 227 - 260
Target Start/End: Complemental strand, 501 - 468
Alignment:
Q  227 ccccgtttggattggcttattttgagtttatgtg 260  Q
    ||||||||||||||||||||||||||||||||||    
T  501 ccccgtttggattggcttattttgagtttatgtg 468  T

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Target: scaffold2089 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold2089
Description:

Target: scaffold2089; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 1066 - 1094
Alignment:
Q  224 aggccccgtttggattggcttattttgag 252  Q
    |||||||||||||||||||||||||||||    
T  1066 aggccccgtttggattggcttattttgag 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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