View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10820_high_4 (Length: 261)
Name: NF10820_high_4
Description: NF10820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10820_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 246
Target Start/End: Original strand, 7947037 - 7947264
Alignment:
| Q |
19 |
aatgaaggcctcagcatccatttgtagtaacagcttgatcttctattctcctccctcaacacaaaactctcacactttctcaccttttctggtcaaatcc |
118 |
Q |
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| T |
7947037 |
aatgaaggcctcagcatccatttgtagtaacagcttgatcttctcttctcctccctcaacacaaaactctcacactttctcaccttttctggtcaaatcc |
7947136 |
T |
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| Q |
119 |
atggctactcccaaaccagttactgtaacttctaaaaaggtcagtgtaaaacaataactatattattacttgttattatgatttttgatgatttacataa |
218 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7947137 |
atggctactcccaaaccagttactgtcacttctaaaaaggtcagtgtaaaacaataactatattattacttgttattatgatttttgatgatttacataa |
7947236 |
T |
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| Q |
219 |
ttgctttgattccttttatgcaaaatat |
246 |
Q |
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||||||| |||||||||||||||||||| |
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| T |
7947237 |
ttgcttttattccttttatgcaaaatat |
7947264 |
T |
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