View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10820_low_13 (Length: 238)
Name: NF10820_low_13
Description: NF10820
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10820_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 38861517 - 38861722
Alignment:
| Q |
15 |
aagaatgacaagaaatatatcaaaaggttttgaataaaaactctgacaatagccaaaatttgaaaattagtaaaagagtataattttccagcacagcagt |
114 |
Q |
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| T |
38861517 |
aagaatgacaagaaatatatcaaaaggttttgaataaaaactctgacaatagccaaaatttgaaaatttgtaaaagagtataattttccagcacagcagt |
38861616 |
T |
|
| Q |
115 |
cgcctacttggttcaaattcaatggttcaatcttacatgtcccattaggagttgcccacgttgctcaaaagtttgactcacgtgccttaattaaactatg |
214 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38861617 |
cgcctacttggttcaaattcaatggttcaatcttacatgtcccattaggagttgcccacgttgctcaaaagtttgactcacgtgccttaattaaactatg |
38861716 |
T |
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| Q |
215 |
cattta |
220 |
Q |
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|||||| |
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| T |
38861717 |
cattta |
38861722 |
T |
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