View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10821_low_20 (Length: 349)
Name: NF10821_low_20
Description: NF10821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10821_low_20 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 233; Significance: 1e-129; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 8585991 - 8586291
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| | | ||||| |||||||| |
|
|
| T |
8585991 |
ttgaggaaatcaatatggacctttttaatgagtgtataaatactgttgagagttgtcttaccgattctaagatagagaagaatggtgtagacgatattgt |
8586090 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8586091 |
ccttgtcggtggctcgtccagaattcccaaagtacaggaactattgagtgacttcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
8586190 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||||||||||||| |||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8586191 |
gttgctagtggggctgcagttcaggcttctttgctgtgtaaagactttaagaaagttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
8586290 |
T |
|
| Q |
314 |
t |
314 |
Q |
| |
|
| |
|
|
| T |
8586291 |
t |
8586291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 14 - 333
Target Start/End: Complemental strand, 8616564 - 8616242
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||| ||| ||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
8616564 |
ttgaggaaatcaatatggacctttttaacgagtgtataaagactgttgagagttgttttaatgattctaagatagagaagagtagtgtagatgatattgt |
8616465 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|||||||| |||||||| || ||||| ||||||||||||||| |||| || || ||| ||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
8616464 |
tcttgtcggtggctcgtctaggattcctaaagtgcaggaactattgagtgactttttcgatgggaaggatttgtgcaagaacatcaatcctgatgaggct |
8616365 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtg---taaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttg |
310 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8616364 |
gttgctagtggggcagcagttcaggctgctttgttgggtactacagactttaagaatgttccaaacttggcgctgcgagatgttacccctctgtcacttg |
8616265 |
T |
|
| Q |
311 |
gtattttagtcaaaggagatatt |
333 |
Q |
| |
|
|||| |||||||||||||||||| |
|
|
| T |
8616264 |
gtatcttagtcaaaggagatatt |
8616242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 14 - 282
Target Start/End: Original strand, 27831160 - 27831428
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| ||||||||||||| ||||| || || | ||||||||||||||||| || || || ||||| || |||||||| |||||||| |||| |
|
|
| T |
27831160 |
ttgaggaaatcaatatggaccttttcaatgaatgtatggagactgttgagagttgtctcactgactctaagatggacaagagtagtatagatgatgttgt |
27831259 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|||||| || ||||| || || ||||||||||||||| | ||| || || || ||||| || || ||||| ||||||| ||||||||||||||||||| |
|
|
| T |
27831260 |
ccttgttggtggctcttcaaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctgatgaggct |
27831359 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtg |
282 |
Q |
| |
|
|||||| ||| ||||| || ||||||||||||||| || | ||| ||| ||||||||||||||||||| |
|
|
| T |
27831360 |
gttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggtg |
27831428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 14 - 315
Target Start/End: Original strand, 10494659 - 10494960
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| |||| ||| |||| | ||||| || |||| |||||| |||||||| | |||||||||||| | |||| | | ||||||||||| |
|
|
| T |
10494659 |
ttgaggaaattaatatagactttttcatcgagtgtatgaatattgttgacagttgtctcagggattcaaagatatacaagaatgatattgatgatattgt |
10494758 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
||||| || |||||||| || ||||||||||||||||| ||| || ||||| ||||| ||||| || |||| || | ||||| || ||||||||| |
|
|
| T |
10494759 |
tcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaacccagatgaggct |
10494858 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||||| ||| ||||| |||||||||||| | ||| || ||| |||||||||||| || ||||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
10494859 |
gttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattgtcacttggta |
10494958 |
T |
|
| Q |
314 |
tt |
315 |
Q |
| |
|
|| |
|
|
| T |
10494959 |
tt |
10494960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 6789395 - 6789096
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||| || || || ||||||||||||||| || | ||||| || ||||||| ||| ||||| |||| |
|
|
| T |
6789395 |
ttgaggaaatcaatatggatatttttaatgagtgtatgaagaccgttgagagttgtcttgttgacgctaagatggacaagagtattgtaaatgatgttgt |
6789296 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaag-atttatgcaagaacatcaatcctgatgaggc |
212 |
Q |
| |
|
|||||| || || || || ||||||||||||||||| ||||| || ||| | |||| |||||||| |||| |||| || |||||| ||||||||||| |
|
|
| T |
6789295 |
ccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttca-tgggaaaggatttgtgcatgagcatcaaccctgatgaggc |
6789197 |
T |
|
| Q |
213 |
tgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggt |
312 |
Q |
| |
|
||||||| || ||||| || ||||||||||||||| | ||| || ||||| |||||||||||||||||||| ||||||||| || |||| |||||| |
|
|
| T |
6789196 |
tgttgcttacggtgcagctgtccaggctgctttgttgagcgaaggctctaagagtgttccaaacttggtgctgcaagatgttacaccgttgtctcttggt |
6789097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 8659246 - 8658946
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||| || || ||||||||||||||||||| ||||||||| ||| ||| |||| | || |||||||| |
|
|
| T |
8659246 |
ttgaggaaatgaatatggatctttttaatgagtgtatgaaaactgttgagagttgtcttagcgattcaaaaatacagatgagtgatattgacgatattgt |
8659147 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
||||| || || ||||| || |||||||||||||| || ||| || || | ||| ||| | ||||| ||||| ||||| || ||||||||| |
|
|
| T |
8659146 |
tcttgtgggtggttcgtctaggattcccaaagtgcaagatctattgcaagaccttttcccaaagaaggttttatacaagagtatcaacccagatgaggct |
8659047 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||||| ||| ||||| |||| |||||| | || | |||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
8659046 |
gttgcttatggtgcagctcttcaagctgctgttttaagcaaaggctttaagaatgtcccaaacttggtgctgcaagatgttaccccattgtcacttggta |
8658947 |
T |
|
| Q |
314 |
t |
314 |
Q |
| |
|
| |
|
|
| T |
8658946 |
t |
8658946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 175 - 314
Target Start/End: Complemental strand, 8545355 - 8545216
Alignment:
| Q |
175 |
gggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaa |
274 |
Q |
| |
|
||||| || |||||||||| ||| || |||||||||||||||||| ||| ||||| || |||||||||||| || || ||||| ||||||||| |||| |
|
|
| T |
8545355 |
gggaaggaattatgcaagagcattaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgctgagtgaagacaataagaatgtcccaa |
8545256 |
T |
|
| Q |
275 |
acttggtgctgcgagatgttacccctctgtcacttggtat |
314 |
Q |
| |
|
|| ||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
8545255 |
acatggtgctacgagatgttacccctttgtcacttggtat |
8545216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 103 - 316
Target Start/End: Complemental strand, 8667213 - 8667000
Alignment:
| Q |
103 |
gatgatattgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatc |
202 |
Q |
| |
|
|||||| |||| |||||||| |||||||| || ||||||||||||||||||| | || |||| ||||| ||||| || |||| || | ||||| | |
|
|
| T |
8667213 |
gatgatgttgtacttgtcggtggctcgtctaggattcccaaagtgcaggaacaattgctagaatatttcaaggggaaggaattattcatgggtatcaacc |
8667114 |
T |
|
| Q |
203 |
ctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctct |
302 |
Q |
| |
|
| || |||||||||||| ||| ||||| |||||||||||| | ||| || ||| || ||||||||| || ||||||||||| |||||||| |||||| | |
|
|
| T |
8667113 |
cagacgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctgtaagaatgtccccaacttggtgctacgagatgtgaccccttt |
8667014 |
T |
|
| Q |
303 |
gtcacttggtattt |
316 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8667013 |
gtcacttggtattt |
8667000 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 8654333 - 8654033
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| |||||||| |||| |||||||| || |||| |||||| |||||||| | |||||||||||| | |||| | | |||||| |||| |
|
|
| T |
8654333 |
ttgaggaaattaatatggactttttcaatgagtgtatcaatattgttgacagttgtctcagagattcaaagatatacaagaatgatattgatgatgttgt |
8654234 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|| || || |||||||| || ||||||||||||||||| ||| || || || ||||| ||||| | ||| | | ||| ||||| || ||||||||| |
|
|
| T |
8654233 |
actcgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagagtttttcaaggggaaggctttgtttatgaatatcaacccagatgaggct |
8654134 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||| ||| || || |||||||||||| | ||| || |||||||||||||||| || ||||||||||| || ||||||||||| |||||||||||| |
|
|
| T |
8654133 |
attgcatatggcgctgctgttcaggctgctattttgagtgaagactttaagaatgtccccaacttggtgctacgtgatgttaccccattgtcacttggta |
8654034 |
T |
|
| Q |
314 |
t |
314 |
Q |
| |
|
| |
|
|
| T |
8654033 |
t |
8654033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 282
Target Start/End: Complemental strand, 17267822 - 17267554
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||| | | |||||||| ||||||| ||| | ||||| || ||||| ||||| |||||| |||| |
|
|
| T |
17267822 |
ttgaggaaatcaatatggacctttttgatgagtgcatggagattgttgagaagtgtcttagtgatgctaagattgacaagagcagagttgatgatgttgt |
17267723 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|||||| || || || || || ||||| ||||||||| ||||| || | |||||||| ||||| || |||||||| | ||||| |||||||||||| |
|
|
| T |
17267722 |
ccttgttggtgggtcttctaggattccgaaagtgcagcaactattgcagaacttcttcaaggggaaggaattatgcaaaagtatcaaccctgatgaggct |
17267623 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtg |
282 |
Q |
| |
|
|||||| ||| || || ||||||||||||||||| || | | | ||||||||||||||||||||| |
|
|
| T |
17267622 |
gttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggtg |
17267554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 26 - 282
Target Start/End: Complemental strand, 17260112 - 17259856
Alignment:
| Q |
26 |
atatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcgg |
125 |
Q |
| |
|
|||||||||||||| |||||||||| | | |||||||| ||||||| ||| ||||| || ||||| ||| | |||||| |||||||||| || || |
|
|
| T |
17260112 |
atatggaccttttttatgagtgcatggagattgttgagaagtgtcttagtgatggtaagattgacaagagcagaattgatgatgttgtccttgttggtgg |
17260013 |
T |
|
| Q |
126 |
ctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggg |
225 |
Q |
| |
|
|| || || ||||| ||||||||| ||||| || || |||||||| || || || |||||||||| |||||| |||||||||||||||||| ||| |
|
|
| T |
17260012 |
atcttctaggattccgaaagtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatcaaccctgatgaggctgttgcttatggt |
17259913 |
T |
|
| Q |
226 |
gcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtg |
282 |
Q |
| |
|
|| || ||||||||||||||||| || | | | ||||||||||||||||||||| |
|
|
| T |
17259912 |
gctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggtg |
17259856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 3146966 - 3146847
Alignment:
| Q |
195 |
catcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgtt |
294 |
Q |
| |
|
|||||| ||||||||||| |||||| ||| ||||| || || |||||||||||| || |||||||||| |||||||||||||||||| ||| ||||||| |
|
|
| T |
3146966 |
catcaaccctgatgaggccgttgcttatggtgcagctgtgcaagctgctttgttgagtgaagactttaaaaatgttccaaacttggtggtgcaagatgtt |
3146867 |
T |
|
| Q |
295 |
acccctctgtcacttggtat |
314 |
Q |
| |
|
| ||| |||| |||||||| |
|
|
| T |
3146866 |
gctcctttgtctcttggtat |
3146847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 246
Target Start/End: Original strand, 29582203 - 29582358
Alignment:
| Q |
91 |
aagagtagagtagatgatattgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgca |
190 |
Q |
| |
|
|||||||| ||||||||||| |||||| | || ||||| || ||||||||||||||||| | ||| || ||||| ||||| ||||| ||||| |||| |
|
|
| T |
29582203 |
aagagtagtgtagatgatatcgtccttattggtggctcttctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgca |
29582302 |
T |
|
| Q |
191 |
agaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttg |
246 |
Q |
| |
|
|| |||||| |||||||||||||||||| ||| ||||| || |||||||||||| |
|
|
| T |
29582303 |
tgagcatcaaccctgatgaggctgttgcttatggtgcagctgtgcaggctgctttg |
29582358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 314
Target Start/End: Complemental strand, 1301343 - 1301044
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||| | ||| || |||||||||||||||| ||||||||| ||| | |||| | ||||||||||| |
|
|
| T |
1301343 |
ttgaggaaattaatatggatctttttaatgagtgtacaaaaaccgttgagagttgtcttagcgattcaaaaatatgcatgagtgatatcgatgatattgt |
1301244 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
||||| || |||||||| || |||||||||||||| || || || || | ||| | ||||| ||||| ||||| ||||| || || |||||| |
|
|
| T |
1301243 |
tcttgtgggtggctcgtctaggattcccaaagtgcaagatatattgcaagacattttcccggagaaagttttatacaagagtatcaa-cccgacgaggct |
1301145 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||||| ||| ||||| |||| |||||| | || | |||| || |||||||| |||||||||||||||| |||||||||||| |||||||||||| |
|
|
| T |
1301144 |
gttgcttatggtgcagctattcaagctgctattttaagcaaaggattcaagaatgtcccaaacttggtgctgcaagatgttaccccattgtcacttggta |
1301045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 312
Target Start/End: Complemental strand, 8581422 - 8581285
Alignment:
| Q |
175 |
gggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaa |
274 |
Q |
| |
|
||||| || |||||||||| |||||| |||||||||||||||||| ||| || || |||||||||||||| | || ||| | |||||| |||||||| |
|
|
| T |
8581422 |
gggaaggaattatgcaagagcatcaaccctgatgaggctgttgcttatggtgctgctattcaggctgctttggttagtgaaggcattaagagtgttccaa |
8581323 |
T |
|
| Q |
275 |
acttggtgctgcgagatgttacccctctgtcacttggt |
312 |
Q |
| |
|
||||| | ||||||||||||| || ||||||||||| |
|
|
| T |
8581322 |
acttgattttgcgagatgttacaccattgtcacttggt |
8581285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 169 - 314
Target Start/End: Complemental strand, 8609645 - 8609500
Alignment:
| Q |
169 |
ttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatg |
268 |
Q |
| |
|
|||||||| || ||||| || | || |||||| ||||||||||| |||||| ||| || || || ||||||||||||||| || ||| | | || | |
|
|
| T |
8609645 |
ttcaatggaaaggatttgtgtatgagcatcaaccctgatgaggcggttgcttatggtgctgctgtccaggctgctttgttgggtgaaggcatcaaatcag |
8609546 |
T |
|
| Q |
269 |
ttccaaacttggtgctgcgagatgttacccctctgtcacttggtat |
314 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
8609545 |
ttccaaacttggtgctgcgagatgttacacctttgtcacttggtat |
8609500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 27846566 - 27846655
Alignment:
| Q |
189 |
caagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaactt |
278 |
Q |
| |
|
||||| |||||| |||||||||||||||||| ||| ||||| || ||||||||||||||| || | ||| ||||||||||||||||||| |
|
|
| T |
27846566 |
caagagcatcaaccctgatgaggctgttgcttttggagcagctgtgcaggctgctttgttgagtgatgacattaagaatgttccaaactt |
27846655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 316
Target Start/End: Original strand, 13333835 - 13333955
Alignment:
| Q |
196 |
atcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgtta |
295 |
Q |
| |
|
||||| || ||||||||||||||| ||| ||||| |||||||||||| | ||| || ||| |||||||| ||| || ||||||||||| |||||||||| |
|
|
| T |
13333835 |
atcaacccagatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagactgtcccgaacttggtgctacgagatgtta |
13333934 |
T |
|
| Q |
296 |
cccctctgtcacttggtattt |
316 |
Q |
| |
|
||| | ||||||||||||| |
|
|
| T |
13333935 |
tcccattatcacttggtattt |
13333955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 169 - 296
Target Start/End: Complemental strand, 8576054 - 8575927
Alignment:
| Q |
169 |
ttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatg |
268 |
Q |
| |
|
||||| ||||| || ||||| |||| |||||| |||||||||||||||||| ||| || | || || |||||||||||| || ||| | |||||||| |
|
|
| T |
8576054 |
ttcaaggggaaggaattatgtaagagcatcaaccctgatgaggctgttgcttatggtgctgttgtccaagctgctttgttgagtgaaggcagtaagaatg |
8575955 |
T |
|
| Q |
269 |
ttccaaacttggtgctgcgagatgttac |
296 |
Q |
| |
|
|||||||||||||| | ||||||||||| |
|
|
| T |
8575954 |
ttccaaacttggtgttacgagatgttac |
8575927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 8537738 - 8537620
Alignment:
| Q |
195 |
catcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgtt |
294 |
Q |
| |
|
|||||| |||||||| ||||||||| ||| || || || ||||||||||||||| | || | |||||| |||||| ||||||||||||||||||||| |
|
|
| T |
8537738 |
catcaaccctgatgaagctgttgcttatggtgctgctgtccaggctgctttgttgagcggaggcattaagactgttccgaacttggtgctgcgagatgtt |
8537639 |
T |
|
| Q |
295 |
acccctctgtcacttggta |
313 |
Q |
| |
|
| |||||||| ||||||| |
|
|
| T |
8537638 |
atacctctgtctcttggta |
8537620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 8646605 - 8646475
Alignment:
| Q |
169 |
ttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatg |
268 |
Q |
| |
|
||||||| ||| || |||||| ||| |||||| ||||||| ||| |||||| ||| ||||| |||||||||||||| || ||| | | ||||||||||| |
|
|
| T |
8646605 |
ttcaatgagaaggaattatgcgagagcatcaaccctgatgtggccgttgcttatggcgcagccgttcaggctgctttattatgtgatggctttaagaatg |
8646506 |
T |
|
| Q |
269 |
ttccaaacttggtgctgcgagatgttacccc |
299 |
Q |
| |
|
||||||||||||| | | |||||| ||||| |
|
|
| T |
8646505 |
ctccaaacttggtgtttcaagatgtcacccc |
8646475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 29 - 246
Target Start/End: Complemental strand, 8601842 - 8601625
Alignment:
| Q |
29 |
tggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcggctc |
128 |
Q |
| |
|
||||||| ||||| |||| ||| | |||||||| |||||||||| ||| | |||| || |||||||| || |||||| ||||||||| ||||| || |
|
|
| T |
8601842 |
tggacctctttaagaagtgtatagagactgttgaaagttgtcttagtgatgctcagatcgaaaagagtagtgtggatgatgctgtccttgttggcggttc |
8601743 |
T |
|
| Q |
129 |
gtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggca |
228 |
Q |
| |
|
|| || |||||||||||||| || || ||| ||||| |||||| |||| || | ||| || |||||||||||||||||| ||||| ||| ||| |
|
|
| T |
8601742 |
ttctaggattcccaaagtgcaacaattactgaaagaatttttcaattggaaggacatttgcgtgagcatcaatcctgatgaggcagttgcctatggcgca |
8601643 |
T |
|
| Q |
229 |
gcagttcaggctgctttg |
246 |
Q |
| |
|
|||||||| ||||||||| |
|
|
| T |
8601642 |
gcagttcaagctgctttg |
8601625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 8559019 - 8558965
Alignment:
| Q |
261 |
taagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggtatt |
315 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||||||| |||| ||||||||| |
|
|
| T |
8559019 |
taagaatgttccaaacatggtgctgagagatgttacccctttgtcccttggtatt |
8558965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 314
Target Start/End: Original strand, 29578047 - 29578257
Alignment:
| Q |
104 |
atgatattgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcc |
203 |
Q |
| |
|
|||| ||||||||||| || || || || |||||||||||||||| | ||||| || || || ||||| || | ||||| |||| || ||| || || |
|
|
| T |
29578047 |
atgaaattgtccttgttggaggttcatctagaattcccaaagtgcggaaactattgcaagactttttcaagggtagggatttgtgcatgagcataaaccc |
29578146 |
T |
|
| Q |
204 |
tgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctg |
303 |
Q |
| |
|
||| |||||||||||| ||| ||||| || ||||||||||||||| | | | | |||||||||||||||| ||||| |||||||| |||| || || |
|
|
| T |
29578147 |
tgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcattaagaatgttccaaatttggtcttgcgagatattacacccttg |
29578246 |
T |
|
| Q |
304 |
tcacttggtat |
314 |
Q |
| |
|
|| |||||||| |
|
|
| T |
29578247 |
tcgcttggtat |
29578257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 313
Target Start/End: Complemental strand, 8590340 - 8590222
Alignment:
| Q |
195 |
catcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgtt |
294 |
Q |
| |
|
||||||||| ||||||||||||||| ||| ||||| ||||| ||||||||| | ||| | | ||||||||||||| || |||||||| | ||||||| |
|
|
| T |
8590340 |
catcaatccagatgaggctgttgcttatggtgcagctgttcaagctgctttgctttgtgatgggattaagaatgttcctaatttggtgctacaagatgtt |
8590241 |
T |
|
| Q |
295 |
acccctctgtcacttggta |
313 |
Q |
| |
|
|| || |||| ||||||| |
|
|
| T |
8590240 |
actccattgtctcttggta |
8590222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 315
Target Start/End: Original strand, 8671622 - 8671684
Alignment:
| Q |
253 |
aaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggtatt |
315 |
Q |
| |
|
|||| |||||||||||| || ||||||||||| ||||||||||| || |||||||||||||| |
|
|
| T |
8671622 |
aaaggctttaagaatgtccccaacttggtgctacgagatgttacgccattgtcacttggtatt |
8671684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 254
Target Start/End: Original strand, 8636804 - 8636868
Alignment:
| Q |
190 |
aagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaa |
254 |
Q |
| |
|
|||| |||||| ||||||||||||||||| ||| |||||||| |||||||| ||||||||||| |
|
|
| T |
8636804 |
aagagcatcaacgctgatgaggctgttgcttatggagcagcagtccaggctgcattgttgtgtaa |
8636868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 312
Target Start/End: Complemental strand, 8570033 - 8569896
Alignment:
| Q |
175 |
gggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaa |
274 |
Q |
| |
|
||||| || |||||||| | ||| || |||||||||||||||||| || ||||| ||||||||| |||| || || | |||||| |||||||| |
|
|
| T |
8570033 |
gggaaggaattatgcaacagcattaaccctgatgaggctgttgcttacggtgcagctattcaggctgttttgcatagtgaaagcgttaagagtgttccaa |
8569934 |
T |
|
| Q |
275 |
acttggtgctgcgagatgttacccctctgtcacttggt |
312 |
Q |
| |
|
||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
8569933 |
acttggttttgcgagatgttacaccattgtcacttggt |
8569896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 143; Significance: 4e-75; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 14 - 316
Target Start/End: Complemental strand, 30775135 - 30774833
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||| ||||||||| |||| |||||||| |||||||||||||| |
|
|
| T |
30775135 |
ttgaggaaatcaatatggacctttttaatgagtgtatacagactgttgagagttgtcttactgattcaaaggtagacaagagtagtgtagatgatattgt |
30775036 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|||||||| || || || || ||||||||||||||||||||| || | | |||||||||||||| ||||| ||||||| |||||||||||||||||| |
|
|
| T |
30775035 |
tcttgtcggtggttcttctaggattcccaaagtgcaggaactattgcgtaatttcttcaatgggaaggatttgtgcaagagcatcaatcctgatgaggca |
30774936 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||||| |||||||| || ||||||||| | ||| || ||| | ||||||||| ||||| ||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
30774935 |
gttgctcacggggcagctgtccaggctgctctattgagtgaaggcattaagaatgccccaaagttggtgctgcgagatgtcacccctttgtcacttggta |
30774836 |
T |
|
| Q |
314 |
ttt |
316 |
Q |
| |
|
||| |
|
|
| T |
30774835 |
ttt |
30774833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 314
Target Start/End: Original strand, 9336190 - 9336476
Alignment:
| Q |
28 |
atggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcggct |
127 |
Q |
| |
|
|||||| |||| |||||||| || |||| |||||| | ||||| | |||||||||||| | ||||||| | ||||||||||| ||||| || |||| |
|
|
| T |
9336190 |
atggactttttcaatgagtgtatgaatattgttgacacctgtctcagggattcaaagatatacaagagtaatattgatgatattgttcttgtgggtggct |
9336289 |
T |
|
| Q |
128 |
cgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggc |
227 |
Q |
| |
|
|||| || ||||| |||||||| |||||| || ||||| ||||| ||||| || |||| || | ||||| || ||||||||||||||| ||| || |
|
|
| T |
9336290 |
cgtctaggattccgaaagtgcaagaactattgctagaatttttcaaggggaaggaattattcatgggtatcaacccagatgaggctgttgcttatggtgc |
9336389 |
T |
|
| Q |
228 |
agcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggtat |
314 |
Q |
| |
|
||| ||||| |||||| | ||| || ||| ||||||||||| || ||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
9336390 |
agctgttcaagctgctattttgagtgaaggctttaagaatgcgcccaacttggtgctacgagatgttaccccattgtcacttggtat |
9336476 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 313
Target Start/End: Complemental strand, 35132340 - 35132040
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagta-gagtagatgatattg |
112 |
Q |
| |
|
||||||||||| || ||||||||||||||||| || ||||| || ||||||||||| | ||| | ||||| || ||||| | | ||||||||| ||| |
|
|
| T |
35132340 |
ttgaggaaatgaatgcagacctttttaatgagtgtatgaataccgtagagagttgtctcattgatgctaagatggacaagagcaagggtagatgatgttg |
35132241 |
T |
|
| Q |
113 |
tccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggc |
212 |
Q |
| |
|
| ||||| || || || || || ||||||||||||||| | ||| || | || ||||| ||||| || || ||||||| ||| || || |||||||| |
|
|
| T |
35132240 |
ttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaagggaaggagttgtgcaagagcattaaccccgatgaggc |
35132141 |
T |
|
| Q |
213 |
tgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggt |
312 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||||| |||||| | | || ||||||||||| |||||| | | |||||||| ||| |||| |||||| |
|
|
| T |
35132140 |
tgtagcttatggggcagcagttcaggctgctttgttgagtaaaggcataaaaaatgttccaaagttggtgttacaggatgttacacctttgtctcttggt |
35132041 |
T |
|
| Q |
313 |
a |
313 |
Q |
| |
|
| |
|
|
| T |
35132040 |
a |
35132040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 26 - 314
Target Start/End: Original strand, 16662289 - 16662577
Alignment:
| Q |
26 |
atatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcgg |
125 |
Q |
| |
|
|||||| ||||||||| ||||| || || | ||||||||||||| || ||||||||||| || ||| | | ||| |||||||||| |||||||| || |
|
|
| T |
16662289 |
atatgggcctttttaacgagtgtatgaagattgttgagagttgttttgtggattcaaagatggacaaggggggtgtacatgatattgttcttgtcggggg |
16662388 |
T |
|
| Q |
126 |
ctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggg |
225 |
Q |
| |
|
|||||| || ||||| |||||||||||| || || | | |||||||||||||| || || ||||||| |||||| |||||||||||||||||| |||| |
|
|
| T |
16662389 |
ctcgtctaggattccaaaagtgcaggaattattgcgtaacttcttcaatgggaaggagttgtgcaagagcatcaaccctgatgaggctgttgcttatggg |
16662488 |
T |
|
| Q |
226 |
gcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggtat |
314 |
Q |
| |
|
||||| || || |||||| ||||| || ||| | ||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| |
|
|
| T |
16662489 |
gcagctgtgcaagctgctgtgttgagtgaaggcattaaggatgttccaaacttggtgctgcgagacgttaccccattgtcacttggtat |
16662577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 43625107 - 43624995
Alignment:
| Q |
202 |
cctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctc |
301 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || ||||||||| | ||| |||||| | |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43625107 |
cctgatgaggctgttgcttatggtgcagctgtccaggctgctattttgagtaaaggcattaagaatgttccaaaattggtgctgcgagatgttacccctt |
43625008 |
T |
|
| Q |
302 |
tgtcacttggtat |
314 |
Q |
| |
|
||||||||||||| |
|
|
| T |
43625007 |
tgtcacttggtat |
43624995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 14 - 313
Target Start/End: Original strand, 12258866 - 12259165
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| || |||| ||||| ||||| ||||| || |||||||||||||||||||| ||| | || | || ||||||| ||||||||| |||| |
|
|
| T |
12258866 |
ttgaggaaataaatttggaacttttcaatgaatgcatgaagactgttgagagttgtcttacggatgctaacacggacaagagtaatgtagatgatgttgt |
12258965 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|||||| || || || || || |||| |||||||||| | ||| | || || ||||| |||||||| || ||||||| ||| ||||||||||||||| |
|
|
| T |
12258966 |
ccttgtaggtgggtcttctaggattctcaaagtgcagcagctattacaggattttttcaaggggaaagagttgtgcaagagcattaatcctgatgaggct |
12259065 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|| ||| |||||| || |||||||||||||||| || |||| | ||||||||||||| |||| ||||| |||||||| ||| |||| ||||||| |
|
|
| T |
12259066 |
gtagcttttggggcggctattcaggctgctttgttaagtgaagatatccagaatgttccaaagttggagctgcaggatgttacacctttgtctcttggta |
12259165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 284
Target Start/End: Complemental strand, 14703291 - 14703021
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||| |||||| |||||||| ||||||||||||| | || | ||||||||||||||||| ||| | ||||| || |||||||||||||||||| |||| |
|
|
| T |
14703291 |
ttgaagaaatgaatatggacttttttaatgagtgtgtgaagattgttgagagttgtcttattgatgctaagatggacaagagtagagtagatgatgttgt |
14703192 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
|||||||| || || || | ||||||||||| ||| || || | || || ||| | ||||| || || ||||| | ||| || |||||||| ||| |
|
|
| T |
14703191 |
tcttgtcggtgggtcttctcggattcccaaagtacagcaattattacaggactttttccaggggaaggagttgtgcaacagcattaaccctgatgaagct |
14703092 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgct |
284 |
Q |
| |
|
|| ||| ||||||||| |||||||||||||||||| || ||||| | ||||||||||| || |||||||| |
|
|
| T |
14703091 |
gtagcttatggggcagctgttcaggctgctttgttgagtgaagacgtcaagaatgttccgaagttggtgct |
14703021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 305
Target Start/End: Original strand, 12245715 - 12245982
Alignment:
| Q |
38 |
ttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcggctcgtccagaat |
137 |
Q |
| |
|
||||||| || ||||| ||||||||||||||| ||| ||| ||||||| || ||||||| |||||||| |||| ||||| || || || || || || |
|
|
| T |
12245715 |
ttaatgattgtataaagactgttgagagttgtattatggatgcaaagatggacaagagtactatagatgattttgtacttgttggtggatcttctaggat |
12245814 |
T |
|
| Q |
138 |
tcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcag |
237 |
Q |
| |
|
||||||||| || | ||| | || || ||||| ||||| || || ||||||| ||| || ||||| |||||||||||| ||||||||| ||||| |
|
|
| T |
12245815 |
tcccaaagtccaacagctattacaggactttttcaacgggaaggaattgtgcaagagcattaaccctgacgaggctgttgcttatggggcagctgttcaa |
12245914 |
T |
|
| Q |
238 |
gctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtc |
305 |
Q |
| |
|
|||||||||||| ||||||| |||||||||||||||| |||||| ||| |||||||| ||| |||| |
|
|
| T |
12245915 |
gctgctttgttgagtaaagatgttaagaatgttccaaatttggtgttgcaggatgttactcctttgtc |
12245982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 311
Target Start/End: Complemental strand, 7542022 - 7541812
Alignment:
| Q |
101 |
tagatgatattgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaa |
200 |
Q |
| |
|
|||||||| |||||||||||||||| || || || ||||||| ||| || | ||| | | || || |||||||| || || || ||||||| ||| || |
|
|
| T |
7542022 |
tagatgatgttgtccttgtcggcgggtcttcgaggattcccatagtacatcagctattaaaggactttttcaatggaaaggacttgtgcaagagcattaa |
7541923 |
T |
|
| Q |
201 |
tcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccct |
300 |
Q |
| |
|
||||||||||||||||||| ||||||||| ||||||||||| |||||| || || | ||||||| | |||||| |||||||||| |||||||| ||| |
|
|
| T |
7541922 |
tcctgatgaggctgttgcttatggggcagctgttcaggctgcattgttgagtggaggcgttaagaacgctccaaagttggtgctgcaggatgttacacct |
7541823 |
T |
|
| Q |
301 |
ctgtcacttgg |
311 |
Q |
| |
|
|||| ||||| |
|
|
| T |
7541822 |
ttgtctcttgg |
7541812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 313
Target Start/End: Complemental strand, 11999136 - 11998992
Alignment:
| Q |
169 |
ttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatg |
268 |
Q |
| |
|
||||| ||||| || || ||||||| ||| || |||||||||||||| ||| ||||||||| ||||| |||||||||||| || |||| ||||||||| |
|
|
| T |
11999136 |
ttcaacgggaaggagttgtgcaagagcattaaccctgatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtgaagatgttaagaatg |
11999037 |
T |
|
| Q |
269 |
ttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
||||||| |||||| ||| |||||||| ||| |||| ||||||| |
|
|
| T |
11999036 |
ttccaaatttggtgttgcaggatgttactcctttgtctcttggta |
11998992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 319
Target Start/End: Original strand, 16657898 - 16658107
Alignment:
| Q |
110 |
ttgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatga |
209 |
Q |
| |
|
|||| ||||| || ||||| || || ||||||||||||||||| ||| || || || ||||| || || ||||||||||| | ||||| || ||||| |
|
|
| T |
16657898 |
ttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagtatcaacccggatga |
16657997 |
T |
|
| Q |
210 |
ggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcactt |
309 |
Q |
| |
|
||||||||| || ||||| ||||| |||||| | ||| || ||| |||||||||||| ||| | |||||| || ||||||||||||| |||| ||| |
|
|
| T |
16657998 |
agctgttgcttacggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgtcccagatttggtgttgagagatgttaccccattgtcgctt |
16658097 |
T |
|
| Q |
310 |
ggtattttag |
319 |
Q |
| |
|
||||| |||| |
|
|
| T |
16658098 |
ggtatcttag |
16658107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 156
Target Start/End: Complemental strand, 12234572 - 12234430
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
||||||||||| ||||||| ||| ||| |||||| || || | ||||||||||||||||| ||| | ||||| || || ||||| || ||||| |||| |
|
|
| T |
12234572 |
ttgaggaaatgaatatggatcttcttattgagtgtatgaagattgttgagagttgtcttagtgatgctaagatggacaaaagtagggtggatgaagttgt |
12234473 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaacta |
156 |
Q |
| |
|
|||| | ||||| || || || ||||||||||||||| ||||| |
|
|
| T |
12234472 |
ccttattggcgggtcctctaggattcccaaagtgcagcaacta |
12234430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 86
Target Start/End: Original strand, 16657802 - 16657874
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagat |
86 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||||| || || |||||||||| ||||||| ||||||||||| |
|
|
| T |
16657802 |
ttgaggaaattaatatggatcttttcaatgagtgtatgaaaactgttgagaattgtcttcgtgattcaaagat |
16657874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 74; Significance: 7e-34; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 111 - 296
Target Start/End: Original strand, 34467170 - 34467355
Alignment:
| Q |
111 |
tgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgag |
210 |
Q |
| |
|
|||||||||||| ||||| || || ||||||||||||||| | ||| || | || || |||||||| || ||| ||||||| | |||||| ||||||||| |
|
|
| T |
34467170 |
tgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatggtaaggatctatgcaatagcatcaaccctgatgag |
34467269 |
T |
|
| Q |
211 |
gctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttac |
296 |
Q |
| |
|
||||| ||| || ||||| || || |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
34467270 |
gctgtcgcttatgtcgcagctgtgcaagctgctttgttgagtaaaggctttaacaatgttccaaacttggtgctgcgagatgttac |
34467355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 332
Target Start/End: Complemental strand, 15594873 - 15594599
Alignment:
| Q |
58 |
gttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaa |
157 |
Q |
| |
|
||||||||||||||| ||| | ||||| | |||||||| ||| ||||||||||| |||| || || || || || |||||||||||||| ||||| |
|
|
| T |
15594873 |
gttgagagttgtcttgatgatgctaagatgaataagagtagtgtaaatgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactat |
15594774 |
T |
|
| Q |
158 |
tgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaaga |
257 |
Q |
| |
|
||| || || ||| | || || || || |||| || |||||| |||||||||||||||||| ||| ||||| || ||||||||||||||| || ||| |
|
|
| T |
15594773 |
tgaaggattttttcgagggaaaggaattgtgcatgagcatcaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtgaagg |
15594674 |
T |
|
| Q |
258 |
ctttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggtattttagtcaaaggagatat |
332 |
Q |
| |
|
||||| |||||||||||||||||| | | ||||||| | ||| |||| |||||| | | | | ||||||||||| |
|
|
| T |
15594673 |
ttttaaaaatgttccaaacttggtgatacaagatgttgcacctttgtctcttggtgtctcacttaaaggagatat |
15594599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 314
Target Start/End: Original strand, 4678842 - 4679142
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgt |
113 |
Q |
| |
|
|||||||||| ||||||||||||| || ||||| || | |||||| |||||||||||| ||||||||||| ||||| | |||||| |||| |
|
|
| T |
4678842 |
ttgaggaaattaatatggaccttttcaacgagtgtatggaaactgttaagagttgtcttagtgattcaaagatgcgcgggagtaatattgatgatgttgt |
4678941 |
T |
|
| Q |
114 |
ccttgtcggcggctcgtccagaattcccaaagtgcaggaactaatgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggct |
213 |
Q |
| |
|
||||| || || || || || ||||||||||||||||| ||| || || || || || |||| ||||| ||||||| ||||| || ||||||||| |
|
|
| T |
4678942 |
tcttgtgggtggttcatcgaggattcccaaagtgcaggatctattgcaagacttttttaagcggaaggatttgtgcaagagtatcaacccagatgaggct |
4679041 |
T |
|
| Q |
214 |
gttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctctgtcacttggta |
313 |
Q |
| |
|
|||||| ||| ||||| | || |||||| | ||| | ||| ||||||||||| || || || |||||||||||||||||||| |||||||||||| |
|
|
| T |
4679042 |
gttgcttatggtgcagctatccaagctgctattttgagcgaaggttttaagaatgtcccgaattttgtgctgcgagatgttaccccattgtcacttggta |
4679141 |
T |
|
| Q |
314 |
t |
314 |
Q |
| |
|
| |
|
|
| T |
4679142 |
t |
4679142 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 310
Target Start/End: Original strand, 52549416 - 52549527
Alignment:
| Q |
199 |
aatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttaccc |
298 |
Q |
| |
|
||||||||||||| ||| ||| ||| ||||| ||||||||||| |||||| || ||| | || ||||||||||||| |||||||||| |||||||| | |
|
|
| T |
52549416 |
aatcctgatgaggttgtagcttatggcgcagctgttcaggctgcattgttgagtgaaggcattcagaatgttccaaagttggtgctgcaggatgttacac |
52549515 |
T |
|
| Q |
299 |
ctctgtcacttg |
310 |
Q |
| |
|
|| |||| |||| |
|
|
| T |
52549516 |
ctttgtctcttg |
52549527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 52549297 - 52549353
Alignment:
| Q |
14 |
ttgaggaaatgtatatggacctttttaatgagtgcataaatactgttgagagttgtc |
70 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||| || || | |||||| ||||||| |
|
|
| T |
52549297 |
ttgaggaaatgaatatggacctttttaaggagtgtatgaagattgttgaaagttgtc |
52549353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 249
Target Start/End: Complemental strand, 12528343 - 12528152
Alignment:
| Q |
58 |
gttgagagttgtcttaccgattcaaagatagagaagagtagagtagatgatattgtccttgtcggcggctcgtccagaattcccaaagtgcaggaactaa |
157 |
Q |
| |
|
||||| |||||| | |||||| | ||||| || |||||||| |||||||||||||| ||||| || |||||||| || |||||||||||| || | ||| |
|
|
| T |
12528343 |
gttgaaagttgtttgaccgatgctaagatggacaagagtagtgtagatgatattgtacttgttggtggctcgtctaggattcccaaagtgaagcagctat |
12528244 |
T |
|
| Q |
158 |
tgagcgaattcttcaatgggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttg |
249 |
Q |
| |
|
|| || || ||||| || || || |||| ||||| |||||| |||||||||||||||||| ||| || || |||||||||||||||||| |
|
|
| T |
12528243 |
tgcaggagtttttcaagggcaaggagttatacaagagcatcaaccctgatgaggctgttgcttatggtgccgctgttcaggctgctttgttg |
12528152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 175 - 294
Target Start/End: Complemental strand, 43744538 - 43744419
Alignment:
| Q |
175 |
gggaaagatttatgcaagaacatcaatcctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaa |
274 |
Q |
| |
|
||||| ||||| || |||||||| || ||||||||||| ||||||| ||| ||||| || ||||||||||||||| || ||| |||||| || ||||||| |
|
|
| T |
43744538 |
gggaaggatttgtgtaagaacattaaccctgatgaggcagttgctattggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccaa |
43744439 |
T |
|
| Q |
275 |
acttggtgctgcgagatgtt |
294 |
Q |
| |
|
|| ||||||||| ||||||| |
|
|
| T |
43744438 |
acgtggtgctgcaagatgtt |
43744419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 314
Target Start/End: Complemental strand, 28219613 - 28219501
Alignment:
| Q |
202 |
cctgatgaggctgttgctagtggggcagcagttcaggctgctttgttgtgtaaagactttaagaatgttccaaacttggtgctgcgagatgttacccctc |
301 |
Q |
| |
|
|||||||||||||||||| ||| ||||| || ||||||||||||||| || ||| |||||| || ||||| || |||||||||| ||||||||| ||| |
|
|
| T |
28219613 |
cctgatgaggctgttgcttatggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccgaagttggtgctgcaagatgttacacctt |
28219514 |
T |
|
| Q |
302 |
tgtcacttggtat |
314 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
28219513 |
tgtctcttggtat |
28219501 |
T |
|
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