View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10821_low_24 (Length: 332)
Name: NF10821_low_24
Description: NF10821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10821_low_24 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 21 - 324
Target Start/End: Complemental strand, 10087137 - 10086836
Alignment:
| Q |
21 |
aattccccactttgcaaccttttctctcctaaaagcttttatgtttttgcctcttgctgcagtaattccattaattgtttacaatcatgggggttgaa-g |
119 |
Q |
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| T |
10087137 |
aattcctcgctttgcaaccttttctctcctaaaagcttttatgtttttgcctcttggtccggtaattccattaattgtttacaatcatgggggttgaaag |
10087038 |
T |
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| Q |
120 |
tacccttgtaattctgattactaaattttttattataaaaaagtctacatgataatatttcaaaaagttacttagttattctattctgtttacgtttcaa |
219 |
Q |
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| T |
10087037 |
tactcttgtaattctgattactaaattttttattataaaaaagtctacatgataatattataaaaagttacttagttattctattctgtttacgtttcaa |
10086938 |
T |
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| Q |
220 |
gtaatagaattagaatgaaaatatcgaatattcagtgaaaagaaatctctattttattccgttcctttttctcagttccaatatgttgtttcattctcct |
319 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
10086937 |
gtaatagaattagaatgaaactatcgaatattcagtgaaaagaaatctctattttattccgttcctttttctcagttccaata---tgtttcattctcct |
10086841 |
T |
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| Q |
320 |
atgct |
324 |
Q |
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||||| |
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| T |
10086840 |
atgct |
10086836 |
T |
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