View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10821_low_34 (Length: 297)
Name: NF10821_low_34
Description: NF10821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10821_low_34 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 8 - 286
Target Start/End: Original strand, 35477893 - 35478173
Alignment:
| Q |
8 |
gagatgaagaattattattacttaggaacaatgaatagaagaagaaaatataatgctcattgacttttcatataaaaaatctttattgactttgaaaaga |
107 |
Q |
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| T |
35477893 |
gagatgaagaattattattacttaggaacaatgaatagaagaagaaaatataatgctcattgacttttcatataaaaaatctttattgactttgaaaaga |
35477992 |
T |
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| Q |
108 |
aaaattagaagagtcaaaagtggttattacttggtactattagatgctttcatttaaatcaaatcgggaacttccaacactttagg-----aaaaaatgg |
202 |
Q |
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| T |
35477993 |
aaaattagaagagtcaaaagtggttattacttggtactattagatgctttcatttaaatcaaatcgggaacttccaacactttaggaaagtaaaaaatgg |
35478092 |
T |
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| Q |
203 |
ttannnnnnngtttagaatagcaagcgatagagttgtttcacttatcgtgtcccaaggcatgtttaacgtgaaaatgaagaagt |
286 |
Q |
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| T |
35478093 |
taatttttttgtttagaatagcgaacgataga---gtttcatttatcgtgtctcaaggcatgtttaacgtgaaaatgaagaagt |
35478173 |
T |
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