View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10821_low_52 (Length: 249)
Name: NF10821_low_52
Description: NF10821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10821_low_52 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 243
Target Start/End: Complemental strand, 25402770 - 25402528
Alignment:
| Q |
1 |
tcacataatgttttatctcattcaccatcttcatcacaaacactagcttcagcaatttcatctccatcatccaaactacgaaacaagttcgtgggtaatt |
100 |
Q |
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| T |
25402770 |
tcacataatgttttatctcattcaccatcttcatcacaaacactagcttcagcaatttcatctccatcatccaaactacgaaacaagttcgtgggtaatt |
25402671 |
T |
|
| Q |
101 |
cgttacccacgaatttgtttcgatccaccaattttgttcttcagaggtctcgatcttttgagaacccactttccaccaatacaagaagaggaagaagaac |
200 |
Q |
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| T |
25402670 |
cattacccacgaatttgtttcgatccaccaattttgttcttcataggtctcgatctttggagaacccactttccaccattacaagaagaggaagaagaac |
25402571 |
T |
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| Q |
201 |
aataagaagggctttcagcgcaagcttagattcattcttctca |
243 |
Q |
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||||||||| |||||||| |||||||||||||||||||||||| |
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| T |
25402570 |
aataagaagagctttcagtgcaagcttagattcattcttctca |
25402528 |
T |
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