View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10821_low_79 (Length: 226)
Name: NF10821_low_79
Description: NF10821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10821_low_79 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 33988495 - 33988720
Alignment:
| Q |
1 |
tctacaacagtaaatatggtggatgatacataaatctttcgtaacttgcaatttgactagttgcaaatttgtttcttacatgcatgggacaaggctgtca |
100 |
Q |
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| T |
33988495 |
tctacaacagtaaatatggtggatgatacataaatctttcgtaacttgcaatttgactagttgcaaatttgtttcttacatgcatgggacaaggctgtca |
33988594 |
T |
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| Q |
101 |
cacatgtaatgagaagccgatattctggtccaatttggtgnnnnnnnnncaacatatttgtaacactgagtattacaaatctaaacaatctgcaaggatt |
200 |
Q |
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| T |
33988595 |
cacatgtaatgagaagccgatattctggtccaatttggtgtttttttttcaacatatttgtaacaccgagtattacaaatctaaacaatctgcaaggatt |
33988694 |
T |
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| Q |
201 |
caattttcagattttgttactagttt |
226 |
Q |
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||||||| |||||||||||||||||| |
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| T |
33988695 |
caattttaagattttgttactagttt |
33988720 |
T |
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