View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10823_low_4 (Length: 277)
Name: NF10823_low_4
Description: NF10823
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10823_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 51933697 - 51933472
Alignment:
| Q |
20 |
ataaacacggttagttaatacttaatattcagtatataagttttatacaactatatcacaatcttgaaggtatgaactgtacttgcatgaactgcagtgg |
119 |
Q |
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| T |
51933697 |
ataaacacggttagttaatacttaatattcagtatataagttttatacaactatatcacaatcttgaaggtatgaactgtacttgcatgaactgcagtgg |
51933598 |
T |
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| Q |
120 |
tttgaaaagaaggcctaccaagatacacttctgaaattagctggtctattcaagaacaattttgatggatttgtgagctacaagatagggaaagatcaaa |
219 |
Q |
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| T |
51933597 |
tttgaaaagaaggcctaccaagatacacttctgaaattagctggtctattcaagaacaattttgatggatttgtgagctacaagatagggaaagatcaaa |
51933498 |
T |
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| Q |
220 |
agttaactgaagagattgtctctgct |
245 |
Q |
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|||||||||||||||||||||||||| |
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| T |
51933497 |
agttaactgaagagattgtctctgct |
51933472 |
T |
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