View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10826_low_16 (Length: 201)

Name: NF10826_low_16
Description: NF10826
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10826_low_16
NF10826_low_16
[»] chr5 (25 HSPs)
chr5 (8-91)||(34371824-34371907)
chr5 (8-91)||(8641886-8641969)
chr5 (8-93)||(3886450-3886535)
chr5 (8-91)||(3886908-3886991)
chr5 (8-83)||(15512871-15512946)
chr5 (8-83)||(2474617-2474692)
chr5 (8-90)||(2474161-2474243)
chr5 (8-93)||(42788495-42788580)
chr5 (8-91)||(189280-189363)
chr5 (8-91)||(2194016-2194099)
chr5 (19-89)||(21883938-21884008)
chr5 (8-91)||(34372280-34372363)
chr5 (8-69)||(17445328-17445389)
chr5 (8-73)||(24182115-24182180)
chr5 (19-92)||(30684861-30684934)
chr5 (19-91)||(34868001-34868073)
chr5 (19-92)||(30720110-30720183)
chr5 (19-66)||(29679983-29680030)
chr5 (8-72)||(22557181-22557246)
chr5 (8-69)||(22556748-22556810)
chr5 (8-61)||(8391203-8391256)
chr5 (19-68)||(10927277-10927326)
chr5 (10-91)||(20858393-20858474)
chr5 (30-78)||(11757145-11757193)
chr5 (8-60)||(18750078-18750130)
[»] chr2 (25 HSPs)
chr2 (8-89)||(30966446-30966527)
chr2 (8-91)||(30966902-30966985)
chr2 (8-91)||(32377758-32377841)
chr2 (8-91)||(5399668-5399751)
chr2 (8-84)||(32377574-32377650)
chr2 (8-91)||(25337848-25337931)
chr2 (8-91)||(33175168-33175251)
chr2 (8-94)||(33771213-33771299)
chr2 (8-91)||(24818537-24818620)
chr2 (20-91)||(29804871-29804942)
chr2 (8-91)||(1912736-1912819)
chr2 (8-91)||(30963114-30963197)
chr2 (8-91)||(83229-83312)
chr2 (8-66)||(16379149-16379207)
chr2 (8-66)||(20502176-20502234)
chr2 (8-58)||(29259504-29259554)
chr2 (8-69)||(11389695-11389756)
chr2 (8-69)||(11406356-11406417)
chr2 (8-73)||(30961752-30961817)
chr2 (8-92)||(15639946-15640030)
chr2 (19-66)||(25433932-25433979)
chr2 (19-73)||(13191197-13191251)
chr2 (8-66)||(16379605-16379663)
chr2 (21-69)||(1952926-1952974)
chr2 (8-64)||(30963598-30963654)
[»] chr1 (28 HSPs)
chr1 (8-91)||(20054387-20054470)
chr1 (8-91)||(20054843-20054926)
chr1 (8-91)||(20055299-20055382)
chr1 (8-91)||(20055755-20055838)
chr1 (8-91)||(20056211-20056294)
chr1 (8-91)||(20056667-20056750)
chr1 (8-91)||(20057114-20057197)
chr1 (8-91)||(20057570-20057653)
chr1 (19-91)||(16451784-16451856)
chr1 (19-91)||(16460937-16461009)
chr1 (8-91)||(20060191-20060274)
chr1 (8-91)||(50002926-50003009)
chr1 (8-93)||(20845510-20845595)
chr1 (19-91)||(35759915-35759987)
chr1 (8-91)||(20053931-20054014)
chr1 (8-91)||(38341118-38341201)
chr1 (8-91)||(52250418-52250501)
chr1 (8-92)||(35759458-35759542)
chr1 (8-92)||(46693585-46693669)
chr1 (19-91)||(52250766-52250838)
chr1 (19-91)||(52251103-52251175)
chr1 (8-73)||(50002576-50002641)
chr1 (9-91)||(49996531-49996613)
chr1 (8-91)||(31822970-31823053)
chr1 (28-83)||(51372733-51372788)
chr1 (8-66)||(43056941-43056999)
chr1 (14-83)||(28181352-28181421)
chr1 (7-91)||(39582552-39582636)
[»] scaffold0389 (1 HSPs)
scaffold0389 (8-94)||(13381-13467)
[»] scaffold0322 (1 HSPs)
scaffold0322 (9-91)||(19179-19261)
[»] chr6 (25 HSPs)
chr6 (9-91)||(17027382-17027464)
chr6 (8-91)||(7912090-7912173)
chr6 (8-91)||(20850533-20850616)
chr6 (10-91)||(2681071-2681152)
chr6 (8-83)||(9352274-9352349)
chr6 (8-91)||(23986168-23986251)
chr6 (19-91)||(13492556-13492628)
chr6 (19-91)||(23776663-23776735)
chr6 (28-91)||(13191364-13191427)
chr6 (19-93)||(20896536-20896610)
chr6 (8-88)||(7912522-7912602)
chr6 (8-92)||(28780322-28780406)
chr6 (19-93)||(13493013-13493087)
chr6 (19-91)||(9440708-9440780)
chr6 (9-91)||(15929352-15929434)
chr6 (31-91)||(6331219-6331279)
chr6 (8-67)||(27334305-27334364)
chr6 (8-67)||(27395045-27395104)
chr6 (8-66)||(2891170-2891228)
chr6 (10-71)||(17730980-17731041)
chr6 (19-92)||(21312194-21312267)
chr6 (8-66)||(2720439-2720497)
chr6 (8-66)||(2890715-2890773)
chr6 (28-81)||(28583196-28583249)
chr6 (9-66)||(31415965-31416021)
[»] chr3 (32 HSPs)
chr3 (10-91)||(14820368-14820449)
chr3 (8-93)||(50347958-50348043)
chr3 (28-91)||(16811611-16811674)
chr3 (8-91)||(32227072-32227155)
chr3 (9-89)||(11179887-11179967)
chr3 (19-91)||(14814172-14814244)
chr3 (19-83)||(27187188-27187252)
chr3 (8-91)||(8067492-8067575)
chr3 (8-91)||(13150405-13150488)
chr3 (8-91)||(32227712-32227795)
chr3 (8-91)||(39653376-39653459)
chr3 (10-88)||(13149953-13150031)
chr3 (8-94)||(28561957-28562043)
chr3 (8-81)||(32386595-32386668)
chr3 (19-91)||(31284127-31284199)
chr3 (8-91)||(16811137-16811220)
chr3 (8-91)||(41473753-41473836)
chr3 (8-66)||(25230124-25230182)
chr3 (8-66)||(25237711-25237769)
chr3 (10-66)||(4067236-4067292)
chr3 (8-91)||(25248323-25248407)
chr3 (8-100)||(37045244-37045336)
chr3 (8-66)||(7477403-7477461)
chr3 (8-66)||(7494093-7494151)
chr3 (9-66)||(25239003-25239060)
chr3 (19-66)||(20884993-20885040)
chr3 (8-71)||(53150683-53150746)
chr3 (8-50)||(2911296-2911338)
chr3 (8-66)||(25238560-25238618)
chr3 (9-66)||(25230973-25231030)
chr3 (8-60)||(25230587-25230639)
chr3 (8-60)||(25238174-25238226)
[»] scaffold0022 (5 HSPs)
scaffold0022 (7-91)||(162985-163069)
scaffold0022 (8-88)||(162531-162612)
scaffold0022 (8-93)||(163283-163368)
scaffold0022 (30-91)||(69666-69727)
scaffold0022 (40-93)||(162481-162534)
[»] chr8 (24 HSPs)
chr8 (8-91)||(22548400-22548483)
chr8 (8-91)||(32292153-32292236)
chr8 (9-91)||(34308330-34308412)
chr8 (9-91)||(34308786-34308868)
chr8 (19-91)||(22026603-22026675)
chr8 (8-91)||(22548846-22548929)
chr8 (19-91)||(12827105-12827177)
chr8 (8-91)||(21315961-21316044)
chr8 (8-91)||(25147748-25147830)
chr8 (8-91)||(27022190-27022273)
chr8 (8-73)||(41658974-41659039)
chr8 (8-91)||(17103294-17103377)
chr8 (9-94)||(9251098-9251183)
chr8 (8-73)||(12100902-12100967)
chr8 (19-91)||(25148189-25148261)
chr8 (8-91)||(31283503-31283586)
chr8 (28-91)||(27021840-27021903)
chr8 (8-73)||(6466468-6466533)
chr8 (8-91)||(27926110-27926193)
chr8 (9-91)||(32292610-32292699)
chr8 (8-66)||(8080218-8080276)
chr8 (28-66)||(15818892-15818930)
chr8 (28-73)||(29117468-29117513)
chr8 (8-80)||(12119199-12119271)
[»] chr7 (27 HSPs)
chr7 (8-91)||(9125171-9125254)
chr7 (8-93)||(2941606-2941691)
chr7 (8-92)||(7646328-7646412)
chr7 (8-92)||(28496066-28496150)
chr7 (8-91)||(28495470-28495553)
chr7 (8-91)||(36422463-36422546)
chr7 (9-91)||(2193469-2193551)
chr7 (8-73)||(43233169-43233234)
chr7 (19-83)||(13122363-13122427)
chr7 (19-83)||(13124994-13125058)
chr7 (8-91)||(6747457-6747540)
chr7 (8-91)||(18833498-18833581)
chr7 (9-90)||(2189357-2189438)
chr7 (9-74)||(26419103-26419168)
chr7 (8-73)||(42515756-42515821)
chr7 (32-91)||(43776321-43776380)
chr7 (8-66)||(6747952-6748010)
chr7 (8-92)||(6718925-6719009)
chr7 (19-91)||(29038871-29038943)
chr7 (8-91)||(7646627-7646710)
chr7 (19-66)||(42515315-42515362)
chr7 (46-91)||(18833633-18833678)
chr7 (8-57)||(29357341-29357390)
chr7 (8-69)||(34405464-34405525)
chr7 (8-91)||(36422594-36422677)
chr7 (8-66)||(2611535-2611593)
chr7 (10-72)||(11372657-11372719)
[»] chr4 (35 HSPs)
chr4 (8-91)||(13266298-13266381)
chr4 (8-91)||(15268018-15268101)
chr4 (10-91)||(50398839-50398920)
chr4 (19-91)||(35477883-35477955)
chr4 (9-92)||(23350127-23350210)
chr4 (8-91)||(24629281-24629364)
chr4 (9-79)||(14571545-14571615)
chr4 (9-78)||(4127276-4127345)
chr4 (8-91)||(7678467-7678550)
chr4 (8-91)||(49998848-49998931)
chr4 (9-83)||(14572007-14572081)
chr4 (8-73)||(35871839-35871904)
chr4 (15-91)||(13265855-13265931)
chr4 (28-91)||(50399336-50399399)
chr4 (31-91)||(50398383-50398443)
chr4 (8-59)||(8467690-8467741)
chr4 (8-66)||(1645619-1645677)
chr4 (8-91)||(23943087-23943170)
chr4 (8-66)||(3169418-3169476)
chr4 (9-91)||(4127739-4127816)
chr4 (8-66)||(7381479-7381537)
chr4 (46-91)||(10668381-10668426)
chr4 (46-91)||(10668887-10668932)
chr4 (46-91)||(10882526-10882571)
chr4 (8-93)||(31816981-31817066)
chr4 (9-69)||(5810047-5810107)
chr4 (9-73)||(17628724-17628788)
chr4 (19-59)||(53996007-53996047)
chr4 (19-66)||(4414257-4414304)
chr4 (19-60)||(23976094-23976135)
chr4 (8-73)||(27578320-27578385)
chr4 (8-93)||(44470718-44470803)
chr4 (28-92)||(21220198-21220262)
chr4 (34-82)||(31817707-31817755)
chr4 (30-70)||(39102828-39102868)
[»] scaffold0243 (1 HSPs)
scaffold0243 (8-92)||(1432-1516)
[»] scaffold0005 (2 HSPs)
scaffold0005 (9-79)||(245761-245831)
scaffold0005 (9-83)||(245295-245369)
[»] scaffold0020 (1 HSPs)
scaffold0020 (8-93)||(107312-107397)
[»] scaffold1519 (1 HSPs)
scaffold1519 (9-93)||(1550-1634)
[»] scaffold0217 (1 HSPs)
scaffold0217 (9-92)||(523-606)
[»] scaffold0168 (1 HSPs)
scaffold0168 (8-91)||(2954-3037)
[»] scaffold0002 (2 HSPs)
scaffold0002 (8-91)||(154514-154597)
scaffold0002 (10-88)||(154971-155049)
[»] scaffold0557 (1 HSPs)
scaffold0557 (8-93)||(2308-2393)
[»] scaffold0277 (1 HSPs)
scaffold0277 (8-92)||(14552-14636)
[»] scaffold0040 (1 HSPs)
scaffold0040 (8-91)||(2061-2144)
[»] scaffold0024 (1 HSPs)
scaffold0024 (8-91)||(105932-106015)
[»] scaffold0018 (1 HSPs)
scaffold0018 (8-91)||(10511-10594)
[»] scaffold0065 (2 HSPs)
scaffold0065 (19-73)||(62976-63030)
scaffold0065 (30-91)||(67214-67275)
[»] scaffold0499 (1 HSPs)
scaffold0499 (8-69)||(1924-1985)
[»] scaffold0442 (1 HSPs)
scaffold0442 (22-89)||(1-68)
[»] scaffold0333 (2 HSPs)
scaffold0333 (8-91)||(5232-5315)
scaffold0333 (8-66)||(4772-4830)
[»] scaffold0047 (1 HSPs)
scaffold0047 (8-66)||(17474-17532)


Alignment Details
Target: chr5 (Bit Score: 64; Significance: 3e-28; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 34371824 - 34371907
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  34371824 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 34371907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 8641969 - 8641886
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  8641969 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 8641886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 3886535 - 3886450
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| || |||||| |||||||||    
T  3886535 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcattctgggatgttacact 3886450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 3886991 - 3886908
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  3886991 cgagtgaggacaaaacacgctgacaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 3886908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 15512946 - 15512871
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  15512946 cgagtgaggacaaaatacgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 15512871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 2474617 - 2474692
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||    
T  2474617 cgagtgaggaaaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagcagtctggg 2474692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 2474161 - 2474243
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttac 90  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||| ||| |||| |||| ||||||    
T  2474161 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagcagtatgggatgttac 2474243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 42788580 - 42788495
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||||| |||||||||  |||||||||||||| |||||||| ||||||||||| ||||||||| |||||||||    
T  42788580 cgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggagtcagtcgacaatcctgaaagcagtctgggatgttacact 42788495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 189280 - 189363
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||| |||||| ||||||||||||  |||||||| |||||||    
T  189280 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgggatcagtccgcaatcctgaaagtagtctgggatgttaca 189363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 2194016 - 2194099
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||  ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  2194016 cgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 2194099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 21884008 - 21883938
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtta 89  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||    
T  21884008 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcttgaaagcagtctgggatgtta 21883938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 34372280 - 34372363
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||| ||| |||||||||| ||| |||||||||||||||||||| ||||||||  |||||||    
T  34372280 cgagtgaggaaaaaacacgctgaaaatactcgtgttggtttatggcgtcagtcggcaatcctgaaagcagtctggaatgttaca 34372363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 17445389 - 17445328
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||||||    
T  17445389 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcct 17445328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 24182180 - 24182115
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | ||||||||||||||||| | ||||||||||||||||| ||||| |||||||||||    
T  24182180 cgagtgaggataaaacacgttgaaaagattcgtgttggtttgtggggttagtcgacaatcctgaaa 24182115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 30684934 - 30684861
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||| ||||| |||| || | ||||||||    
T  30684934 aaaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaatcttgaaagcagtttgagatgttacac 30684861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 34868001 - 34868073
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||| |||||||| || |||||||||||||||| ||||||||| |||||||    
T  34868001 aaaacacgctaaaaagactcgtgttgatttgtgggatccgtcggcaatcctgaaagcagtctgggatgttaca 34868073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 30720183 - 30720110
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| ||||||||||  ||||||||||||| |||| ||| ||||| ||||| ||||||||| ||||||||    
T  30720183 aaaacacgctgaaaagactcctgttggtttgtggagtcaatcgacaatcttgaaagcagtctgggatgttacac 30720110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 29680030 - 29679983
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||    
T  29680030 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaat 29679983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 22557181 - 22557246
Alignment:
Q  8 cgagtgagaagaaaacacgttg-aaaagactagtgttggtttgtggggtcagtcggcaatcctgaa 72  Q
    |||||||| | |||||||| || |||||||| |||||||||||| |||||||||| ||||||||||    
T  22557181 cgagtgaggacaaaacacgctgtaaaagactcgtgttggtttgtagggtcagtcgacaatcctgaa 22557246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 22556748 - 22556810
Alignment:
Q  8 cgagtgagaagaaaacacgttg-aaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||| | |||||||| || |||||||| |||||||||||| |||||||||| |||||||    
T  22556748 cgagtgaggacaaaacacgctgtaaaagactcgtgttggtttgtagggtcagtcgacaatcct 22556810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 8391256 - 8391203
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcg 61  Q
    |||||||| | |||||||| ||| |||||| |||||| ||||||||||||||||    
T  8391256 cgagtgaggacaaaacacgctgagaagactcgtgttgatttgtggggtcagtcg 8391203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 10927326 - 10927277
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcc 68  Q
    |||||||| |||||||||| |||||||||||| ||||| |||| ||||||    
T  10927326 aaaacacgctgaaaagactcgtgttggtttgtagggtcggtcgacaatcc 10927277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 20858474 - 20858393
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||| | |||||||| |||||| ||| |||||| |||||  ||||||||| |||||||||||  ||| |||| |||||||    
T  20858474 agtgaggacaaaacacgctgaaaatactcgtgttgatttgttaggtcagtcgacaatcctgaaagaagtttgggatgttaca 20858393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 11757193 - 11757145
Alignment:
Q  30 aaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagt 78  Q
    ||||||||  |||||||||| ||||||||||||||||||| ||| ||||    
T  11757193 aaaagactcttgttggtttgcggggtcagtcggcaatcctaaaagcagt 11757145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 18750130 - 18750078
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtc 60  Q
    |||||||| | |||||||  |||||||||| | ||||||||||||||||||||    
T  18750130 cgagtgaggacaaaacacactgaaaagactcgagttggtttgtggggtcagtc 18750078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 5e-27; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 30966446 - 30966527
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtta 89  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  30966446 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgtta 30966527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 30966902 - 30966985
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  30966902 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggagtcagtcggcaatcctgaaagcagtctgggatgttaca 30966985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 32377841 - 32377758
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  32377841 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 32377758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 5399751 - 5399668
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||| |||||||| || ||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  5399751 cgagtgagaacaaaacacgctggaaagacttgtgttggtttgtggggtcagtcgacaatcctaaaagcagtctgggatgttaca 5399668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 32377650 - 32377574
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggt 84  Q
    |||||||| | |||||||| |||||| ||| ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  32377650 cgagtgaggacaaaacacgctgaaaaaactcgtgttggtttgtggggtcagtcggcaatcctaaaagcagtctgggt 32377574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 25337931 - 25337848
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||| | |||||||    
T  25337931 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgagatgttaca 25337848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 33175168 - 33175251
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| || ||||||| ||||| |||||| |||||||||||||||||||||| ||||||||| |||||||    
T  33175168 cgagtgaggacaaaacacgctggaaagactcgtgttagtttgtagggtcagtcggcaatcctgaaagcagtctgggatgttaca 33175251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 33771213 - 33771299
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacactc 94  Q
    |||||||| | |||||||  |||||||||| |||||||||||||||||||| ||||||| |||||| || |||||| ||||||||||    
T  33771213 cgagtgaggacaaaacacactgaaaagactcgtgttggtttgtggggtcagccggcaattctgaaagcaatctgggatgttacactc 33771299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 24818537 - 24818620
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||  |||| ||| |||||||    
T  24818537 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtagtcggggatgttaca 24818620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 29804871 - 29804942
Alignment:
Q  20 aaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| |||||||||| ||||||||||||||| ||||||| |||| |||||| ||||||||| |||||||    
T  29804871 aaacacgctgaaaagactcgtgttggtttgtgggatcagtcgacaatgctgaaagcagtctgggatgttaca 29804942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 1912736 - 1912819
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||||||||||||||| |||||||||||| | ||||||||||||| || |||   ||||||| |||||||    
T  1912736 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtagagtcagtcggcaatgcttaaagtcgtctgggatgttaca 1912819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 30963197 - 30963114
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||| |||||||||||||| ||||||||||||| ||||| ||||||||| ||||| |||| | || |||||||    
T  30963197 cgagtgaggataaaatacgttgaaaagactcgtgttggtttgtgaggtcaatcggcaatcatgaaagcagttttggatgttaca 30963114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 83229 - 83312
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||||||| ||||||  |||||||||||||||| | ||||||||| |||||  |||||| | |||||||    
T  83229 cgagtgaggacaaaacacgttgataagacttatgttggtttgtggggttattcggcaatcatgaaagtagtctgagatgttaca 83312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 16379149 - 16379207
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||| ||||    
T  16379149 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaat 16379207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 20502176 - 20502234
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| ||||| |||||| |||||||||||||||    
T  20502176 cgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtagggtcagtcggcaat 20502234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 29259554 - 29259504
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcag 58  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||| ||||    
T  29259554 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtgggatcag 29259504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 11389695 - 11389756
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||||| |||||| | |||||| |||  |||||||||||||||||||||| |||||||    
T  11389695 cgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcct 11389756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 11406356 - 11406417
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||||| |||||| | |||||| |||  |||||||||||||||||||||| |||||||    
T  11406356 cgagtgagaataaaacatgctgaaaaaactcatgttggtttgtggggtcagtcgacaatcct 11406417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 30961817 - 30961752
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||  |||||||||| ||||| ||||||||||||| ||||||||| |||||    
T  30961817 cgagtgaggacaaaacacagtgaaaagacttgtgttagtttgtggggtcaatcggcaatcatgaaa 30961752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 15639946 - 15640030
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | ||||||||  ||||||||| ||||||||| || ||||||||||||||| || |||   ||||||| ||||||||    
T  15639946 cgagtgaggacaaaacacgcagaaaagactcgtgttggttggtagggtcagtcggcaatgcttaaagtcgtctgggatgttacac 15640030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 25433979 - 25433932
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| |||||||| | |||||||||||| |||||||||||||||    
T  25433979 aaaacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaat 25433932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 13191197 - 13191251
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | ||||||||||||||||||| ||| |||||||| ||||| |||||    
T  13191197 aaaacacgctaaaaagactagtgttggtttatggagtcagtcgacaatcttgaaa 13191251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 16379605 - 16379663
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||| ||| ||||    
T  16379605 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcattcgacaat 16379663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 1952926 - 1952974
Alignment:
Q  21 aacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||| | |||||||  |||||||||||||||||||||||||| ||||    
T  1952926 aacacgctaaaaagacccgtgttggtttgtggggtcagtcggcactcct 1952974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 30963654 - 30963598
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggca 64  Q
    |||||||| | |||||||  |||||||||| || |||||||||||| ||||||||||    
T  30963654 cgagtgaggacaaaacacagtgaaaagactcgttttggtttgtgggatcagtcggca 30963598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 8e-26; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20054470 - 20054387
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20054470 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20054387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20054926 - 20054843
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20054926 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20054843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20055382 - 20055299
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20055382 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20055299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20055838 - 20055755
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20055838 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20055755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20056294 - 20056211
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20056294 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20056211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20056750 - 20056667
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20056750 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20057197 - 20057114
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20057197 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20057114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20057653 - 20057570
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20057653 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 20057570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 16451856 - 16451784
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  16451856 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 16451784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 16461009 - 16460937
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  16461009 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 16460937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20060274 - 20060191
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| || ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  20060274 cgagtgaggacaaaacacgatggaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggggtgttaca 20060191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 50003009 - 50002926
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  50003009 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcagcaatcctgaaagcagtctgggatgttaca 50002926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 20845595 - 20845510
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| | |||||||||    
T  20845595 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctgagatgttacact 20845510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 35759987 - 35759915
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  35759987 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcatgaaagcagtctgggatgttaca 35759915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 20054014 - 20053931
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||| | |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  20054014 cgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaagcagtctgggatgttaca 20053931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 38341118 - 38341201
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||||  ||||||||| |||||||||| |||||||||||||||||||||||| ||||||||| |||||||    
T  38341118 cgagtgaggacaaaacacgcggaaaagactcgtgttggtttatggggtcagtcggcaatcctgaaagcagtctgggatgttaca 38341201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 52250418 - 52250501
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  52250418 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 52250501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 35759542 - 35759458
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||||| |||||||||| |||||||||| |||||||||||||||||| |||||  |||||||| ||||||||    
T  35759542 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttttggggtcagtcggcaatcatgaaagtagtctggggtgttacac 35759458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 46693669 - 46693585
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||||| |||||||||  ||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||    
T  46693669 cgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgacaatcctgaaagcagtttgggatgttacac 46693585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 52250766 - 52250838
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  52250766 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 52250838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 52251103 - 52251175
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  52251103 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 52251175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 50002641 - 50002576
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||||||||||    
T  50002641 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaa 50002576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 49996613 - 49996531
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| ||||||||||  |||| ||||||||||||||||||||||||| ||| ||||||| | |||||||    
T  49996613 gagtgaggacaaaacacgctgaaaagactcttgttagtttgtggggtcagtcggcaatcctaaaagcagtctgagatgttaca 49996531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 31823053 - 31822970
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||| | |||||||||| |||||| ||||||||||||||| ||||||| |||| || |||||| |||||||    
T  31823053 cgagtgaggacaaaacatgctgaaaagactcgtgttgatttgtggggtcagtcagcaatccagaaagcattctgggatgttaca 31822970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 83
Target Start/End: Complemental strand, 51372788 - 51372733
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||||| ||||||||||||||||||| ||||||||| ||||| |||| ||||    
T  51372788 tgaaaagactcgtgttggtttgtggggtcaatcggcaatcttgaaagcagtatggg 51372733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 43056999 - 43056941
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||  |||||| ||| |||||||||||| |||||||||||||||    
T  43056999 cgagtgaggacaaaacacactgaaaaaacttgtgttggtttgtagggtcagtcggcaat 43056941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 28181421 - 28181352
Alignment:
Q  14 agaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||| |||||||  |||||||||| |||||||||||||| | |||| | ||||||||||| |||| ||||    
T  28181421 agaacaaaacactctgaaaagactcgtgttggtttgtggaggcagttgacaatcctgaaagcagtatggg 28181352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 39582552 - 39582636
Alignment:
Q  7 tcgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||||| | |||||||| ||| |||||| || ||||||||| || |||||||||||| || |||  ||| |||| |||||||    
T  39582552 tcgagtgaggacaaaacacgctgagaagactcgttttggtttgtaggatcagtcggcaatgcttaaagtagtttgggatgttaca 39582636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 8 - 94
Target Start/End: Complemental strand, 13467 - 13381
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacactc 94  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||    
T  13467 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtccgggatgttacactc 13381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 19179 - 19261
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  19179 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 19261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 3e-25; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 17027464 - 17027382
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  17027464 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 17027382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 7912090 - 7912173
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  7912090 cgagtgaggacaaaacacgctgaaaagacttgtgttggtttgtggggtcagtcgacaatcctgaaagcagtctgggatgttaca 7912173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 20850533 - 20850616
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  20850533 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatggggtgttaca 20850616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 2681152 - 2681071
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||| | |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||    
T  2681152 agtgaggacaaaacacgttgagaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagctgtctgggatgttaca 2681071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 9352274 - 9352349
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||| | |||||| | |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  9352274 cgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 9352349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23986251 - 23986168
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||| ||||| |||||||||| |||||||||||||||||||||||||||| |||||| |||| |||| |||||||    
T  23986251 cgagtgaggagaagacacgctgaaaagacttgtgttggtttgtggggtcagtcggcaattctgaaagcagtatgggatgttaca 23986168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 13492556 - 13492628
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||| ||||| |||||| || |||||||    
T  13492556 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctagggtgttaca 13492628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 23776663 - 23776735
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||| | |||||||||||||| |||||||||||||||||||| ||||||||| |||||||    
T  23776663 aaaacacgctgaaaagattcgtgttggtttgtggagtcagtcggcaatcctgaaagcagtctgggatgttaca 23776735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 13191427 - 13191364
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  13191427 tgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctggggtgttaca 13191364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 20896610 - 20896536
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||  |||||||||| |||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||    
T  20896610 aaaacacactgaaaagactcgtgttggtttgtggggtcagccggcaatcttgaaagcagtctgggatgttacact 20896536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 7912522 - 7912602
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtt 88  Q
    |||||||| | |||||||| ||||||||||  |||||||||||||||| ||||||||||||||||| || |||||| ||||    
T  7912522 cgagtgaggacaaaacacgctgaaaagactcatgttggtttgtggggttagtcggcaatcctgaaagcaatctgggatgtt 7912602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 28780322 - 28780406
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | ||||||  ||||||||||| |||||||||||||||||||| || |||| |||||| ||||||||| ||||||||    
T  28780322 cgagtgaggataaaacattttgaaaagactcgtgttggtttgtggggtcagccgacaatgctgaaagcagtctgggatgttacac 28780406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 13493013 - 13493087
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||| | |||||||||| |||||| ||||| ||||||||| |||||||||||| ||||||||| |||||||||    
T  13493013 aaaacatgctgaaaagactcgtgttgatttgtagggtcagtcagcaatcctgaaagcagtctggggtgttacact 13493087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 9440780 - 9440708
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||| ||| |||||| ||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  9440780 aaaatacgctgaaaaaactcgtgctggtttgtggggtcagtcggcaatcttgaaagcagtctgggatgttaca 9440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 15929352 - 15929434
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||| ||| | |||||||| |||||| |||||||||||| ||||||||||| ||| ||||||||| |||||||    
T  15929352 gagtgaggacaaaatacgctaaaaagacttgtgttgatttgtggggtcactcggcaatccttaaagcagtctgggatgttaca 15929434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 6331279 - 6331219
Alignment:
Q  31 aaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| |||||||||||| |||||||||||||||| ||||| ||||||| | |||||||    
T  6331279 aaagactcgtgttggtttgtagggtcagtcggcaatcttgaaagcagtctgagatgttaca 6331219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 27334305 - 27334364
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatc 67  Q
    |||||||| | |||||||| |||||||||| |||||| |||||||||||||||| |||||    
T  27334305 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatc 27334364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 27395045 - 27395104
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatc 67  Q
    |||||||| | |||||||| |||||||||| |||||| |||||||||||||||| |||||    
T  27395045 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatc 27395104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2891228 - 2891170
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||| | |||||||||||| |||||||||||||||    
T  2891228 cgagtgaggacaaaacacgctgaaaagattcgtgttggtttgtagggtcagtcggcaat 2891170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 17731041 - 17730980
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctga 71  Q
    |||||| | |||||||| | |||||||| |||||||||||| |||||||||| |||||||||    
T  17731041 agtgaggacaaaacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaatcctga 17730980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 21312194 - 21312267
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| |||| || |||   ||||||| ||||||||    
T  21312194 aaaacacattgaaaagactggtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttacac 21312267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2720497 - 2720439
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||| |||||||| ||| |||||| |||| ||||||  |||||||||||||||    
T  2720497 cgagtgagaacaaaacacgctgagaagactcgtgtcggtttgcagggtcagtcggcaat 2720439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2890773 - 2890715
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| | |||||||| |||||||||||| |||||||||| ||||    
T  2890773 cgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtagggtcagtcgacaat 2890715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 28583196 - 28583249
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctg 81  Q
    ||||||||||  |||| |||||||||||||||||||||||  |||| |||||||    
T  28583196 tgaaaagactcatgttagtttgtggggtcagtcggcaatctcgaaagcagtctg 28583249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 31416021 - 31415965
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||| | |||||||| |||||||| | ||||||||||||||| ||||||||||||    
T  31416021 gagtgaggacaaaacacgctgaaaaga-tcgtgttggtttgtgggatcagtcggcaat 31415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-24; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 14820368 - 14820449
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  14820368 agtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 14820449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 50347958 - 50348043
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||||    
T  50347958 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttacact 50348043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 16811611 - 16811674
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  16811611 tgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 16811674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 32227155 - 32227072
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  32227155 cgagtgaggaaaaaacacattgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 32227072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 89
Target Start/End: Complemental strand, 11179967 - 11179887
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtta 89  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||    
T  11179967 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgtta 11179887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 14814172 - 14814244
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||| |||||||    
T  14814172 aaaacacgctgaaaagactcgtgttggtttgtggggttagtcggcaatactgaaagcagtctgggatgttaca 14814244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 27187252 - 27187188
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| |||||| |||||||||    
T  27187252 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaattctgaaaacagtctggg 27187188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 8067492 - 8067575
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||| ||||| ||||||||||| ||| ||||||||| |||||||    
T  8067492 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgaggtcaatcggcaatcctaaaagcagtctgggatgttaca 8067575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 13150488 - 13150405
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||| |||||||||||||||| |||| |||||| ||||||||| |||||||    
T  13150488 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 13150405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 32227712 - 32227795
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||| ||||||||||| |||||||||||| |||||||||| |||| |||||| ||||||||| |||||||    
T  32227712 cgagtgaggaaaaaacacattgaaaagactcgtgttggtttgtagggtcagtcgacaatgctgaaagcagtctgggatgttaca 32227795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 39653376 - 39653459
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| || ||| ||||||||| |||||||    
T  39653376 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctaaaagcagtctgggatgttaca 39653459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 13150031 - 13149953
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtt 88  Q
    |||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||    
T  13150031 agtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgtt 13149953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 8 - 94
Target Start/End: Original strand, 28561957 - 28562043
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacactc 94  Q
    |||||||| | |||||||| |||||||||| |||||||||||||||||||||||| |||| ||||| |||| || | ||||||||||    
T  28561957 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggtaatcttgaaagcagtatgagatgttacactc 28562043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 81
Target Start/End: Complemental strand, 32386668 - 32386595
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctg 81  Q
    |||||||| | |||||||| | |||||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  32386668 cgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaagcagtctg 32386595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 31284199 - 31284127
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||| ||||| || |||||| |||||||    
T  31284199 aaaacacgccgaaaagactcgtgttggtttgtggggtcagtcggcaatcatgaaagcaatctgggatgttaca 31284127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 16811137 - 16811220
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||| ||| |||||||| | |||||||||||||||||| |||||||||||||||| || |||||| |||||||    
T  16811137 cgagtgaggacaaaatacgctgaaaagattcgtgttggtttgtggggtcggtcggcaatcctgaaagcaatctgggatgttaca 16811220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 41473753 - 41473836
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||  ||||||||||||||||||||||| ||||| ||||| |||| || | |||||||    
T  41473753 cgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtggggtcagtcgccaatcgtgaaagcagtatgagatgttaca 41473836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 25230182 - 25230124
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | ||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  25230182 cgagtgaggacaaaacacgttggaaagactagtgttggtttgtagggtcagtcgacaat 25230124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 25237769 - 25237711
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | ||||||||||| |||||||||||||||||||| |||||||||| ||||    
T  25237769 cgagtgaggacaaaacacgttggaaagactagtgttggtttgtagggtcagtcgacaat 25237711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 4067292 - 4067236
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||| | |||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  4067292 agtgaggacaaaacacgctgaaaagaccagtgttggtttgtagggtcagtcggcaat 4067236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 25248323 - 25248407
Alignment:
Q  8 cgagtgagaagaaaacacgttg-aaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||||||| |||||||| |||||| |||||| ||| ||||| ||||||| ||| ||||||||| |||||||    
T  25248323 cgagtgaggacaaaacacgttgaaaaagactcgtgttgatttgtgaggttagtcgacaatcctaaaagcagtctgggatgttaca 25248407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Original strand, 37045244 - 37045336
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacactctggttt 100  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||| |||| || |||   ||||||| ||||||| | ||||||    
T  37045244 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttacagtttggttt 37045336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7477403 - 7477461
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||| ||| |||||||||||||||  ||||||| |||||||||||||| ||||    
T  7477403 cgagtgagaacaaagcacgttgaaaagactcatgttggtatgtggggtcagtcgacaat 7477461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7494093 - 7494151
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||| ||| |||||||||||||||  ||||||| |||||||||||||| ||||    
T  7494093 cgagtgagaacaaagcacgttgaaaagactcatgttggtatgtggggtcagtcgacaat 7494151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 25239060 - 25239003
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||| | |||||||| |||||||||| |||||||||||| |||||||||| ||||    
T  25239060 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaat 25239003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 20885040 - 20884993
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| |||||||||| |||||||||||| ||||||||| |||||    
T  20885040 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtctgcaat 20884993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 53150746 - 53150683
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctga 71  Q
    |||||||| | |||||| ||||||||||||  |||| ||||||||||||||||  |||||||||    
T  53150746 cgagtgaggacaaaacatgttgaaaagactcatgttagtttgtggggtcagtcaacaatcctga 53150683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 2911296 - 2911338
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgt 50  Q
    |||||||| | ||||||||||||||||||| ||||||||||||    
T  2911296 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgt 2911338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 25238618 - 25238560
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| ||||||||||||  |||| |||||||||    
T  25238618 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaat 25238560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 25231030 - 25230973
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    ||||||| | |||||||| |||||||||| ||||||||||||  |||| |||||||||    
T  25231030 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtatggtcggtcggcaat 25230973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 25230639 - 25230587
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtc 60  Q
    |||||||||  |||||||| || ||||||| |||||||||||| |||||||||    
T  25230639 cgagtgagatcaaaacacgctggaaagactcgtgttggtttgtagggtcagtc 25230587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 25238226 - 25238174
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtc 60  Q
    |||||||||  |||||||| || ||||||| |||||||||||| |||||||||    
T  25238226 cgagtgagatcaaaacacgctggaaagactcgtgttggtttgtagggtcagtc 25238174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 5e-24; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 7 - 91
Target Start/End: Complemental strand, 163069 - 162985
Alignment:
Q  7 tcgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||||| | |||||||| |||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  163069 tcgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggccagtcggcaatcctgaaaacagtctgggatgttaca 162985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 162612 - 162531
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaa-gactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtt 88  Q
    |||||||| | |||||||| |||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  162612 cgagtgaggacaaaacacgctgaaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgtt 162531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 163283 - 163368
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||||| |||||||||| |||||||||||| ||||| |||| |||||||||||   ||||||| |||||||||    
T  163283 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtctgtcgacaatcctgaaagtcgtctgggatgttacact 163368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 69727 - 69666
Alignment:
Q  30 aaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||||| || ||||||||||||||||||| |||| |||| |||||||    
T  69727 aaaagactcgtgttggtttgttggttcagtcggcaatcctgaaagcagtttgggatgttaca 69666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 162534 - 162481
Alignment:
Q  40 tgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||||||||||||||||||||||||| ||| || |||| | |||||||||    
T  162534 tgttggtttgtggggtcagtcggcaatcctaaaagcaatctgagatgttacact 162481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 22548483 - 22548400
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  22548483 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgttaca 22548400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 32292153 - 32292236
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  32292153 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgggatgttaca 32292236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 34308412 - 34308330
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  34308412 gagtgaggacaaaacacgctgaaaagactcgtgctggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 34308330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 34308868 - 34308786
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||    
T  34308868 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcagcaatcctgaaagcagtctgggatgttaca 34308786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 22026603 - 22026675
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||  |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  22026603 aaaacacactgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgggatgttaca 22026675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 22548929 - 22548846
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  22548929 cgagtgaggataaaacacgctgaacagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgttaca 22548846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 12827177 - 12827105
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| || |||||||| ||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  12827177 aaaacacttttaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaagcagtctgggatgttaca 12827105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 21316044 - 21315961
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||| ||| ||||||| ||| ||||||||| |||||||    
T  21316044 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcaatcgacaatcctaaaagcagtctgggatgttaca 21315961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 25147748 - 25147830
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||| || |||||||    
T  25147748 cgagtgagtacaaaacacgctgaaaagactcgtgttggtttgt-gggtcagtcggcaatcctgaaagcagtcttgggtgttaca 25147830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 27022273 - 27022190
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| | |||||||| ||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  27022273 cgagtgaggacaaaacacgctaaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagcagtctgggatgttaca 27022190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 41659039 - 41658974
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||    
T  41659039 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatgctgaaa 41658974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 17103294 - 17103377
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||   ||||||| |||||||    
T  17103294 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagtcgtctgggatgttaca 17103377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 94
Target Start/End: Original strand, 9251098 - 9251183
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacactc 94  Q
    ||||||| | |||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||| ||||||  | ||||||||||    
T  9251098 gagtgaggacaaaacacgctgaaaaaacttgtgttggtttgtggggtcaatcgacaatcctgaaagcagtctatgatgttacactc 9251183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 12100902 - 12100967
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||    
T  12100902 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaa 12100967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 25148189 - 25148261
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||| |||| || | |||||||    
T  25148189 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagcagtatgagatgttaca 25148261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 31283586 - 31283503
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||| ||||||||||||| ||||||||||||||||||||||| ||||  |||||   ||||||| |||||||    
T  31283586 cgagtgaggacaaaacgcgttgaaaagactcgtgttggtttgtggggtcagtcgacaatgttgaaagtcgtctgggatgttaca 31283503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 91
Target Start/End: Complemental strand, 27021903 - 27021840
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||| |||||||||||||  |||||||||||||||||||| |||| || | |||||||    
T  27021903 tgaaaagactcgtgttggtttgtgaagtcagtcggcaatcctgaaaacagtatgagatgttaca 27021840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 6466468 - 6466533
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | ||| |||| | |||||||| |||||||||||||||| ||||||||||| ||||||    
T  6466468 cgagtgaggacaaagcacgctaaaaagacttgtgttggtttgtggggccagtcggcaatactgaaa 6466533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 27926110 - 27926193
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||| | |||||||||| |||||||||||| |||||||||| |||| || |||   ||||||| |||||||    
T  27926110 cgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 27926193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 32292610 - 32292699
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtg-------gggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| ||||||||||||        |||||||||||||||||| ||| ||||||||| |||||||    
T  32292610 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtactttgtagggtcagtcggcaatcctaaaagcagtctgggatgttaca 32292699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 8080276 - 8080218
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| |||||||||||| ||| |||||| ||||    
T  8080276 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggccagtcgacaat 8080218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Complemental strand, 15818930 - 15818892
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||||| |||||||||||||||| |||||||||||    
T  15818930 tgaaaagacttgtgttggtttgtggggccagtcggcaat 15818892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 28 - 73
Target Start/End: Original strand, 29117468 - 29117513
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||||| |||||||||||| ||||| ||||| ||||||||||    
T  29117468 tgaaaagactcgtgttggtttgtagggtcggtcggtaatcctgaaa 29117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 80
Target Start/End: Complemental strand, 12119271 - 12119199
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtct 80  Q
    |||||||| | ||| ||| ||||||| ||| |||||||||||||||||  || ||  ||||||||||||||||    
T  12119271 cgagtgaggacaaagcacattgaaaatactcgtgttggtttgtggggttcgttggtgatcctgaaatcagtct 12119199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 9125171 - 9125254
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  9125171 cgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggggtgttaca 9125254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 2941691 - 2941606
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||  |||| ||||||||| |||||||||    
T  2941691 cgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtgcggtcagtcggcaatcacgaaagcagtctgggatgttacact 2941606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 7646412 - 7646328
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||||||    
T  7646412 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttacac 7646328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 28496066 - 28496150
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||  ||||||||    
T  28496066 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaaacagtttggaatgttacac 28496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 28495553 - 28495470
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||| || |||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||    
T  28495553 cgagtgaggacaaaacccgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctgcgatgttaca 28495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 36422463 - 36422546
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  36422463 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 36422546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 2193469 - 2193551
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||| | |||||||    
T  2193469 gagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaatcctgaaagcagtctgagatgttaca 2193551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 43233169 - 43233234
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  43233169 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaa 43233234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 13122427 - 13122363
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||    
T  13122427 aaaacacgctgaaaagactcgtgttggtttgtggggtcaatcggcaatcctgaaagcagtctggg 13122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 13125058 - 13124994
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  13125058 aaaacacgctgaaaggactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctggg 13124994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 6747540 - 6747457
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||| |||||||||||| |||||||||||| ||||||||||||||| || ||| ||||||||| |||||||    
T  6747540 cgagtgaggacaaaacaagttgaaaagacttgtgttggtttgtagggtcagtcggcaatgcttaaagcagtctgggatgttaca 6747457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 18833498 - 18833581
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||| |||||||| | ||||||||||||||||| ||||||||| |||||||    
T  18833498 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtgggataagtcggcaatcctgaaagcagtctggggtgttaca 18833581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 90
Target Start/End: Original strand, 2189357 - 2189438
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttac 90  Q
    ||||||| | |||||||| ||| |||||| |||||| ||||||||| |||||||||||||||||| ||||||||| ||||||    
T  2189357 gagtgaggacaaaacacgctgagaagactcgtgttgatttgtggggacagtcggcaatcctgaaagcagtctgggatgttac 2189438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 26419168 - 26419103
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaat 74  Q
    ||||||| | |||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  26419168 gagtgaggacaaaacatgttgaaaagactcgtgttggtttgtggggtcagtcgacaatcctgaaat 26419103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 42515756 - 42515821
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||| |||||    
T  42515756 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcttgaaa 42515821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 43776321 - 43776380
Alignment:
Q  32 aagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||    
T  43776321 aagactcgtgttggtttgtggggttagtcggcaatcctgaaagcagtctgggatgttaca 43776380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 6748010 - 6747952
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||||||||    
T  6748010 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaat 6747952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 6719009 - 6718925
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||||  |||||||| | |||||||||||||||||||||| |||||||| |||   ||||||| ||||||||    
T  6719009 cgagtgaggacaaaacacactgaaaagaatcgtgttggtttgtggggtcagtcagcaatcctaaaagtcgtctgggatgttacac 6718925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 29038943 - 29038871
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| |||||||||||| ||||||||||||||| || |||   ||||||| |||||||    
T  29038943 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaatgcttaaagtcgtctgggatgttaca 29038871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 7646627 - 7646710
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||  |||||||||| ||||||||||||||||| ||||| ||||||| |||   ||||||| |||||||    
T  7646627 cgagtgaggacaaaacacactgaaaagactcgtgttggtttgtggggttagtcgacaatcctaaaagtcgtctgggatgttaca 7646710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 42515315 - 42515362
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||||    
T  42515315 aaaacacgctgaaaagactcgtgttggtttgtagggtcagtcggcaat 42515362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 18833633 - 18833678
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||||    
T  18833633 tttgtgggatcagtcggcaatcctgaaagcagtctggggtgttaca 18833678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 29357390 - 29357341
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtca 57  Q
    |||||||||| ||| ||||||||||||||| |||||||||||| ||||||    
T  29357390 cgagtgagaacaaagcacgttgaaaagactcgtgttggtttgtagggtca 29357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 34405525 - 34405464
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||| | |||||||| |||||||||  |||||| |||||||||||||||| |||||||    
T  34405525 cgagtgaggacaaaacacgctgaaaagacccgtgttgatttgtggggtcagtcgacaatcct 34405464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 36422594 - 36422677
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||  |||||||||| |||||| |||||||||||||||| |||| || |||  | |||||| |||||||    
T  36422594 cgagtgaggacaaaacacactgaaaagactcgtgttgatttgtggggtcagtcgacaatgctaaaagtaatctgggatgttaca 36422677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 2611593 - 2611535
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||  |||||||||| |||||||||||| |||||||||| ||||    
T  2611593 cgagtgaggacaaaacactctgaaaagactcgtgttggtttgtagggtcagtcgacaat 2611535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 72
Target Start/End: Original strand, 11372657 - 11372719
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaa 72  Q
    |||||| | |||||| | |||||||||| |||||||||||| |||||| || |||||||||||    
T  11372657 agtgaggacaaaacatgctgaaaagactcgtgttggtttgtagggtcactcagcaatcctgaa 11372719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 13266298 - 13266381
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |||| |||| |||||||    
T  13266298 cgagtgaggagaaaacatgttgaaaagacttgtgttggtttgtggggtcagtcgacaatcctgaaagcagtatgggatgttaca 13266381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 15268101 - 15268018
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||| || |||||||    
T  15268101 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtctcggctgttaca 15268018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 50398920 - 50398839
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||| | ||||||||||| ||||||| |||||||||||| |||||||||||||||||||||| ||||||||| |||||||    
T  50398920 agtgaggacaaaacacgttggaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgggatgttaca 50398839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 35477883 - 35477955
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  35477883 aaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagtatgggatgttaca 35477955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 23350210 - 23350127
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    ||||||| | |||||||  |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||| ||||||||    
T  23350210 gagtgaggacaaaacacactgaaaagactcgtgttggtttgtggggtcagtcggcaattctgaaagcagtctggggtgttacac 23350127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 24629364 - 24629281
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||| ||||||| | |||||||    
T  24629364 cgagtgaggacaaaacacgctgaaaagactcgtgttagtttgtggggtcagtcggcaatcctgaaagcagtctgtgatgttaca 24629281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 14571615 - 14571545
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtc 79  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  14571615 gagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcgggaatcctgaaagcagtc 14571545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 4127345 - 4127276
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagt 78  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  4127345 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctgaaagcagt 4127276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 7678550 - 7678467
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||| |||||||||||||||||| |||| |||||| ||||||||| |||||||    
T  7678550 cgagtgaggacaaaacacgctgaaaagactcgtgtaggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 7678467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 49998848 - 49998931
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||||||||| ||||||||||| |||||| |||| |||| |||||||    
T  49998848 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggacagtcggcaattctgaaagcagtttggggtgttaca 49998931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 14572081 - 14572007
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    ||||||| | |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  14572081 gagtgaggacaaaacacggtgaaaagactcgtgttggtttgcggggtcagtcggcaatcctgaaagcagtatggg 14572007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 35871839 - 35871904
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  35871839 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgggatcagtcggcaatcctgaaa 35871904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 13265855 - 13265931
Alignment:
Q  15 gaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||||| |||||||||| ||||| ||||||| |||||||||| |||||||||| ||||||| | |||||||    
T  13265855 gaagaaaacacgctgaaaagactcgtgttagtttgtgcggtcagtcggtaatcctgaaagcagtctgagatgttaca 13265931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 50399336 - 50399399
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||| |||||||||||| |||||||||||||||||||||| ||||||| | |||||||    
T  50399336 tgaaaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgcgatgttaca 50399399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 50398443 - 50398383
Alignment:
Q  31 aaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||| | |||||||    
T  50398443 aaagactcgtgttggtttgtagggtcagtcggcaatcctgaaagcagtctgagatgttaca 50398383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 8467741 - 8467690
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagt 59  Q
    |||||||| | ||||||||||||||||||| |||||||||||||||||||||    
T  8467741 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagt 8467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 1645677 - 1645619
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | ||||||||||||||||||| |||||||||||| |||||||| ||||||    
T  1645677 cgagtgaggacaaaacacgttgaaaagactcgtgttggtttgtagggtcagttggcaat 1645619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23943170 - 23943087
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||| |||| || |||   ||||||| |||||||    
T  23943170 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 23943087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 3169418 - 3169476
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | ||||||||||||||| ||| |||||||||||| |||||||| ||||||    
T  3169418 cgagtgaggacaaaacacgttgaaaatactcgtgttggtttgtagggtcagttggcaat 3169476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 4127816 - 4127739
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||     |||||||||| ||||| ||||||||| |||||||    
T  4127816 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtgg-----gtcggcaatcttgaaagcagtctgggatgttaca 4127739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 7381479 - 7381537
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||  |||||||||||| |||||||||||||||    
T  7381479 cgagtgaggacaaaacacgctgaaaagacccgtgttggtttgtagggtcagtcggcaat 7381537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 10668381 - 10668426
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  10668381 tttgtggggtcagtgggcaatcctgaaagcagtctggggtgttaca 10668426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 10668887 - 10668932
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  10668887 tttgtggggtcagttggcaatcctgaaagcagtctggggtgttaca 10668932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 91
Target Start/End: Original strand, 10882526 - 10882571
Alignment:
Q  46 tttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||    
T  10882526 tttgtggggtcagtgggcaatcctgaaagcagtctggggtgttaca 10882571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 31817066 - 31816981
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||| |||||||||||| ||| |||||||||||| || ||| ||||||||| |  ||| |||| |||||||||    
T  31817066 cgagtgaggacaaaacatgttgaaaagactcgtgctggtttgtggggccaatcgacaatcctgatagtagtatgggatgttacact 31816981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 5810047 - 5810107
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    ||||||| | |||||||| ||||||||||  ||||| |||||||||| |||||||||||||    
T  5810047 gagtgaggataaaacacgctgaaaagactcatgttgatttgtggggttagtcggcaatcct 5810107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 17628724 - 17628788
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    ||||||| | |||||||  || ||||||| |||||||| ||||| ||||||||||||||||||||    
T  17628724 gagtgaggacaaaacacactggaaagacttgtgttggtatgtggagtcagtcggcaatcctgaaa 17628788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 53996047 - 53996007
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagt 59  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  53996047 aaaacacgttgaaaagactcgtgttggtttgtagggtcagt 53996007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 4414304 - 4414257
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||  |||||||||| |||||||||||| |||||||||||||||    
T  4414304 aaaacacactgaaaagactcgtgttggtttgtagggtcagtcggcaat 4414257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 23976135 - 23976094
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtc 60  Q
    |||||||| ||||||||||| ||||||||| |||||||||||    
T  23976135 aaaacacgctgaaaagactaatgttggtttatggggtcagtc 23976094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 27578385 - 27578320
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| | ||||||||  ||||||||| ||| ||||||||||| ||||||  |||||||||||    
T  27578385 cgagtgaggacaaaacacgcagaaaagactcgtgatggtttgtgggatcagtcaacaatcctgaaa 27578320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 44470803 - 44470718
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||||| || ||||||| |||||||||||| |||||||||  |||| || |||   ||||||| |||||||||    
T  44470803 cgagtgaggacaaaacacgctggaaagactcgtgttggtttgtagggtcagtcaacaattcttaaagtcgtctggggtgttacact 44470718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 92
Target Start/End: Complemental strand, 21220262 - 21220198
Alignment:
Q  28 tgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||||| ||| || ||| |||||||||||||||||| ||||| |||| || | ||||||||    
T  21220262 tgaaaagacttgtgctgatttctggggtcagtcggcaatcttgaaagcagtttgaggtgttacac 21220198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 82
Target Start/End: Complemental strand, 31817755 - 31817707
Alignment:
Q  34 gactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgg 82  Q
    |||| ||||||||||| ||| |||||| |||||||||||| ||||||||    
T  31817755 gactcgtgttggtttgagggatcagtcagcaatcctgaaagcagtctgg 31817707  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 39102868 - 39102828
Alignment:
Q  30 aaaagactagtgttggtttgtggggtcagtcggcaatcctg 70  Q
    |||||| ||||||||||||||||| |||||| |||||||||    
T  39102868 aaaagattagtgttggtttgtgggctcagtcagcaatcctg 39102828  T

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Target: scaffold0243 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 8 - 92
Target Start/End: Original strand, 1432 - 1516
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||||| |||||||||| |||||||||||||| |||||||| ||||||||||| ||||||||| ||||||||    
T  1432 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggcgtcagtcgacaatcctgaaagcagtctgggatgttacac 1516  T

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Target: scaffold0005 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 79
Target Start/End: Original strand, 245761 - 245831
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtc 79  Q
    ||||||| | ||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||||    
T  245761 gagtgaggacaaaacacgttgaaaagactcgtgttggtttgtggggtcagtcgggaatcctgaaagcagtc 245831  T

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Target: scaffold0005; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 245295 - 245369
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctggg 83  Q
    ||||||| | |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||    
T  245295 gagtgaggacaaaacacggtgaaaagactcgtgttggtttgcggggtcagtcggcaatcctgaaagcagtatggg 245369  T

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Target: scaffold0020 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 8 - 93
Target Start/End: Complemental strand, 107397 - 107312
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| | |||||| | |||||||||| ||||||||||||||||||||||||| || |||||| ||||||||| |||||||||    
T  107397 cgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagtcggctattctgaaagcagtctgggatgttacact 107312  T

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Target: scaffold1519 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 1634 - 1550
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    ||||||| | |||||||| | |||||||| |||||||||||||||||||||||  |||||||||| ||||||||| |||||||||    
T  1634 gagtgaggacaaaacacgctaaaaagactcgtgttggtttgtggggtcagtcgataatcctgaaagcagtctgggatgttacact 1550  T

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Target: scaffold0217 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Original strand, 523 - 606
Alignment:
Q  9 gagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    ||||||| | |||||||| |||||||||| ||||||||||||||||||||||||||||||| |||  ||||| || ||||||||    
T  523 gagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcggcaatcctaaaagtagtctcggatgttacac 606  T

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Target: scaffold0168 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 2954 - 3037
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||| ||||||||||||||||||||| |||||| |||||| || |||||||    
T  2954 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcggcaatgctgaaagcagtctcggatgttaca 3037  T

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Target: scaffold0002 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 154514 - 154597
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||| |||||||||||||||| |||| |||||| ||||||||| |||||||    
T  154514 cgagtgaggacaaaacacgctgaaaagactcgtgttgatttgtggggtcagtcgacaatgctgaaagcagtctgggatgttaca 154597  T

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Target: scaffold0002; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 154971 - 155049
Alignment:
Q  10 agtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtt 88  Q
    |||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| |||||| ||||||||| ||||    
T  154971 agtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagcagtctgggatgtt 155049  T

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Target: scaffold0557 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 2308 - 2393
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacact 93  Q
    |||||||| |||||||||| |||||||||| |||||||||||| || ||||||| ||||||| ||| ||||||||| | |||||||    
T  2308 cgagtgaggagaaaacacgctgaaaagactcgtgttggtttgtaggatcagtcgacaatcctaaaagcagtctgggattttacact 2393  T

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Target: scaffold0277 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 14636 - 14552
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttacac 92  Q
    |||||||| | |||||| | |||||||||| |||||||||||||||||||| || |||| |||||| ||||||||| ||||||||    
T  14636 cgagtgaggacaaaacatgctgaaaagactcgtgttggtttgtggggtcagccgacaatgctgaaagcagtctgggatgttacac 14552  T

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Target: scaffold0040 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 2144 - 2061
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||| ||||||| |||   ||||||| |||||||    
T  2144 cgagtgaggacaaaacacattgaaaagactcgtgttggtttgtggggtcagtcgacaatcctaaaagttgtctgggatgttaca 2061  T

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Target: scaffold0024 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 105932 - 106015
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||| | ||||||||||||||| |||||| ||||||| | |||||||    
T  105932 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttatagggtcagtcggcaattctgaaagcagtctgagatgttaca 106015  T

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Target: scaffold0018 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 10511 - 10594
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||  |||| ||| |||||||    
T  10511 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatgctgaaagtagtcggggatgttaca 10594  T

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Target: scaffold0065 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 63030 - 62976
Alignment:
Q  19 aaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaa 73  Q
    |||||||| |||||||||| || ||||||||||||||||||||||||||||||||    
T  63030 aaaacacgctgaaaagactcgtattggtttgtggggtcagtcggcaatcctgaaa 62976  T

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Target: scaffold0065; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 67275 - 67214
Alignment:
Q  30 aaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||| ||| ||||||||||||||||||| ||||||||||||||| ||||||| | |||||||    
T  67275 aaaacacttgtgttggtttgtggggtcaatcggcaatcctgaaagcagtctgtgatgttaca 67214  T

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Target: scaffold0499 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 1985 - 1924
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcct 69  Q
    |||||||| | |||| ||| |||||||||| ||||||||||||||||||||||| |||||||    
T  1985 cgagtgaggacaaaatacgctgaaaagactcgtgttggtttgtggggtcagtcgacaatcct 1924  T

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Target: scaffold0442 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 1 - 68
Alignment:
Q  22 acacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgtta 89  Q
    ||||| |||||||||| |||||||||||| |||||||| ||||||||| ||| |||| |||| |||||    
T  1 acacgctgaaaagactcgtgttggtttgtagggtcagtaggcaatcctaaaagcagtttgggatgtta 68  T

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Target: scaffold0333 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 5232 - 5315
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaatcctgaaatcagtctgggttgttaca 91  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||| |||| || |||   ||||||| |||||||    
T  5232 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaatgcttaaagtcgtctgggatgttaca 5315  T

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Target: scaffold0333; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 4772 - 4830
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| |||||||||||| |||||||||| ||||    
T  4772 cgagtgaggacaaaacacgctgaaaagactcgtgttggtttgtagggtcagtcgacaat 4830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 17532 - 17474
Alignment:
Q  8 cgagtgagaagaaaacacgttgaaaagactagtgttggtttgtggggtcagtcggcaat 66  Q
    |||||||| | |||||||| |||||||||| |||||||||  | |||||||||||||||    
T  17532 cgagtgaggacaaaacacgctgaaaagactcgtgttggttcatagggtcagtcggcaat 17474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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