View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10827_high_5 (Length: 250)

Name: NF10827_high_5
Description: NF10827
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10827_high_5
NF10827_high_5
[»] chr8 (39 HSPs)
chr8 (6-250)||(33511723-33511967)
chr8 (29-69)||(36497659-36497699)
chr8 (30-63)||(11138911-11138944)
chr8 (6-67)||(34247896-34247957)
chr8 (28-72)||(11097153-11097197)
chr8 (29-68)||(8143242-8143281)
chr8 (28-63)||(14228711-14228746)
chr8 (21-68)||(18550116-18550163)
chr8 (29-68)||(37562174-37562213)
chr8 (30-69)||(40413372-40413411)
chr8 (29-67)||(102344-102382)
chr8 (29-63)||(38844823-38844857)
chr8 (29-63)||(40528752-40528786)
chr8 (28-69)||(5771908-5771949)
chr8 (28-69)||(13592764-13592805)
chr8 (28-69)||(20288531-20288572)
chr8 (28-69)||(21075160-21075201)
chr8 (29-70)||(26294186-26294227)
chr8 (29-70)||(26307443-26307484)
chr8 (27-68)||(36064029-36064070)
chr8 (28-69)||(40380279-40380320)
chr8 (28-69)||(41746818-41746859)
chr8 (27-63)||(102465-102501)
chr8 (22-70)||(1248250-1248298)
chr8 (29-69)||(6004942-6004982)
chr8 (27-59)||(7129541-7129573)
chr8 (29-69)||(12045686-12045726)
chr8 (28-64)||(13540800-13540836)
chr8 (28-64)||(13683637-13683673)
chr8 (30-70)||(14233667-14233707)
chr8 (31-63)||(21273745-21273777)
chr8 (21-69)||(21649056-21649104)
chr8 (29-69)||(28927679-28927719)
chr8 (27-63)||(35937543-35937579)
chr8 (29-69)||(38128809-38128849)
chr8 (29-69)||(39021476-39021516)
chr8 (21-69)||(41776312-41776360)
chr8 (33-69)||(44380651-44380687)
chr8 (29-69)||(45101394-45101434)
[»] chr2 (33 HSPs)
chr2 (16-70)||(28508476-28508530)
chr2 (6-68)||(8757666-8757728)
chr2 (29-72)||(14140370-14140413)
chr2 (28-67)||(43621980-43622019)
chr2 (6-67)||(14957714-14957776)
chr2 (6-68)||(35518397-35518459)
chr2 (16-69)||(35171247-35171299)
chr2 (27-68)||(36909874-36909915)
chr2 (28-63)||(22303207-22303242)
chr2 (30-69)||(29795445-29795484)
chr2 (29-63)||(3091745-3091779)
chr2 (30-68)||(14891112-14891150)
chr2 (21-63)||(31629608-31629650)
chr2 (28-69)||(5031921-5031962)
chr2 (30-67)||(11548069-11548106)
chr2 (28-69)||(18531599-18531640)
chr2 (28-69)||(29168723-29168764)
chr2 (22-63)||(30220836-30220877)
chr2 (29-62)||(44018068-44018101)
chr2 (29-69)||(3299138-3299178)
chr2 (29-69)||(4738605-4738645)
chr2 (29-69)||(5067679-5067719)
chr2 (33-65)||(14857752-14857784)
chr2 (28-68)||(18510674-18510714)
chr2 (16-68)||(28494858-28494910)
chr2 (33-69)||(31296882-31296918)
chr2 (28-68)||(32755822-32755862)
chr2 (29-69)||(33296104-33296144)
chr2 (28-68)||(36383461-36383501)
chr2 (16-68)||(36802895-36802947)
chr2 (34-66)||(37109275-37109307)
chr2 (16-68)||(39449137-39449189)
chr2 (21-69)||(45202018-45202066)
[»] chr3 (41 HSPs)
chr3 (6-69)||(9027735-9027798)
chr3 (6-68)||(47683912-47683974)
chr3 (6-67)||(3775871-3775932)
chr3 (6-67)||(43149231-43149292)
chr3 (29-69)||(7867744-7867784)
chr3 (16-69)||(8254025-8254077)
chr3 (28-69)||(44855249-44855290)
chr3 (28-69)||(48405408-48405449)
chr3 (28-69)||(50559244-50559285)
chr3 (27-63)||(1295336-1295372)
chr3 (28-68)||(38944173-38944213)
chr3 (29-69)||(43169775-43169815)
chr3 (29-69)||(45528975-45529015)
chr3 (30-66)||(49031436-49031472)
chr3 (28-63)||(11327112-11327147)
chr3 (28-63)||(47101526-47101561)
chr3 (30-69)||(49196694-49196733)
chr3 (29-63)||(462434-462468)
chr3 (29-63)||(32187145-32187179)
chr3 (27-69)||(43977017-43977059)
chr3 (29-63)||(45205292-45205326)
chr3 (30-68)||(47683800-47683838)
chr3 (27-69)||(53932422-53932464)
chr3 (30-63)||(30554-30587)
chr3 (28-69)||(30400188-30400229)
chr3 (28-69)||(32146018-32146059)
chr3 (28-69)||(36818954-36818995)
chr3 (28-61)||(41637312-41637345)
chr3 (27-68)||(50652387-50652428)
chr3 (29-69)||(1901959-1901999)
chr3 (29-69)||(1911405-1911445)
chr3 (29-69)||(18169155-18169195)
chr3 (22-74)||(29057600-29057652)
chr3 (21-69)||(29846777-29846825)
chr3 (28-68)||(32931950-32931990)
chr3 (29-69)||(35376584-35376624)
chr3 (29-61)||(35987254-35987286)
chr3 (28-64)||(39629871-39629907)
chr3 (29-69)||(40159871-40159911)
chr3 (6-74)||(43460510-43460578)
chr3 (21-69)||(48117473-48117521)
[»] chr7 (35 HSPs)
chr7 (6-68)||(7295589-7295651)
chr7 (28-74)||(43255599-43255645)
chr7 (6-63)||(7458201-7458258)
chr7 (30-63)||(23680061-23680094)
chr7 (29-69)||(4971288-4971328)
chr7 (16-63)||(2347080-2347126)
chr7 (29-68)||(19426579-19426618)
chr7 (28-63)||(26153650-26153685)
chr7 (28-63)||(33050187-33050222)
chr7 (28-63)||(37385265-37385300)
chr7 (32-63)||(37832454-37832485)
chr7 (30-69)||(37856188-37856227)
chr7 (29-68)||(40693561-40693600)
chr7 (29-63)||(1789995-1790029)
chr7 (29-63)||(1814340-1814374)
chr7 (29-67)||(37355274-37355312)
chr7 (27-69)||(41227065-41227107)
chr7 (29-63)||(46725621-46725655)
chr7 (16-69)||(116629-116681)
chr7 (28-69)||(15564909-15564950)
chr7 (28-69)||(28548253-28548294)
chr7 (28-69)||(30864449-30864490)
chr7 (8-69)||(34104823-34104884)
chr7 (30-63)||(38547313-38547346)
chr7 (28-69)||(44511137-44511178)
chr7 (28-60)||(5868334-5868366)
chr7 (29-69)||(10591034-10591074)
chr7 (27-67)||(11788376-11788416)
chr7 (28-68)||(13437197-13437237)
chr7 (15-63)||(29763834-29763881)
chr7 (29-69)||(31274562-31274602)
chr7 (6-66)||(32315948-32316008)
chr7 (31-63)||(33223564-33223596)
chr7 (29-69)||(37392041-37392081)
chr7 (28-68)||(45555973-45556013)
[»] chr6 (21 HSPs)
chr6 (28-74)||(27334851-27334897)
chr6 (28-74)||(27395591-27395637)
chr6 (6-69)||(22422272-22422335)
chr6 (28-69)||(3339531-3339572)
chr6 (30-69)||(12441536-12441575)
chr6 (13-72)||(26391302-26391361)
chr6 (22-63)||(10840722-10840763)
chr6 (30-63)||(12177581-12177614)
chr6 (16-69)||(15318208-15318261)
chr6 (28-69)||(25127865-25127906)
chr6 (29-74)||(32457285-32457330)
chr6 (30-63)||(32644627-32644660)
chr6 (29-74)||(32729882-32729927)
chr6 (16-69)||(33421758-33421811)
chr6 (29-69)||(3088971-3089011)
chr6 (29-69)||(11785353-11785393)
chr6 (29-69)||(12044330-12044370)
chr6 (29-69)||(15666806-15666846)
chr6 (29-69)||(15722536-15722576)
chr6 (6-66)||(20006671-20006731)
chr6 (29-69)||(28965873-28965913)
[»] chr1 (39 HSPs)
chr1 (29-75)||(18610765-18610811)
chr1 (8-69)||(7420758-7420819)
chr1 (22-69)||(10435824-10435871)
chr1 (21-67)||(48634362-48634408)
chr1 (28-69)||(6829815-6829856)
chr1 (28-69)||(7078532-7078573)
chr1 (28-69)||(26585205-26585246)
chr1 (15-68)||(27447266-27447319)
chr1 (6-63)||(37947112-37947169)
chr1 (16-69)||(42256458-42256510)
chr1 (29-69)||(8934629-8934669)
chr1 (30-69)||(9011643-9011682)
chr1 (30-69)||(27687542-27687581)
chr1 (30-69)||(40596077-40596116)
chr1 (28-59)||(50145833-50145864)
chr1 (33-63)||(9882696-9882726)
chr1 (27-69)||(27352628-27352670)
chr1 (29-63)||(30198010-30198044)
chr1 (29-67)||(38627332-38627370)
chr1 (31-69)||(40612112-40612150)
chr1 (30-72)||(41507217-41507259)
chr1 (29-63)||(50035570-50035604)
chr1 (30-63)||(3977559-3977592)
chr1 (28-69)||(11097916-11097957)
chr1 (28-69)||(11947793-11947834)
chr1 (28-69)||(21433433-21433474)
chr1 (16-69)||(29489380-29489432)
chr1 (28-69)||(35224239-35224280)
chr1 (28-69)||(35883639-35883680)
chr1 (16-69)||(37588695-37588748)
chr1 (29-69)||(1690444-1690484)
chr1 (30-66)||(7188399-7188435)
chr1 (28-64)||(9882555-9882591)
chr1 (33-69)||(10384209-10384245)
chr1 (34-62)||(14442265-14442293)
chr1 (28-64)||(37848558-37848594)
chr1 (28-64)||(41619059-41619095)
chr1 (28-68)||(49425737-49425777)
chr1 (29-69)||(50226912-50226952)
[»] chr4 (54 HSPs)
chr4 (6-67)||(45678385-45678446)
chr4 (30-69)||(33093138-33093177)
chr4 (29-68)||(35017152-35017191)
chr4 (29-68)||(47014938-47014977)
chr4 (6-68)||(34259948-34260010)
chr4 (13-67)||(49371067-49371121)
chr4 (28-69)||(8455859-8455900)
chr4 (27-68)||(41495012-41495053)
chr4 (28-69)||(42815402-42815443)
chr4 (29-69)||(940292-940332)
chr4 (21-69)||(9096073-9096121)
chr4 (29-69)||(33278673-33278713)
chr4 (29-69)||(38864769-38864809)
chr4 (29-69)||(42853937-42853977)
chr4 (29-69)||(44272843-44272883)
chr4 (28-68)||(51359822-51359862)
chr4 (30-73)||(32365690-32365733)
chr4 (30-69)||(41262652-41262691)
chr4 (30-69)||(54036552-54036591)
chr4 (29-63)||(169535-169569)
chr4 (31-69)||(6290460-6290498)
chr4 (29-63)||(12694461-12694495)
chr4 (27-69)||(33484139-33484181)
chr4 (29-63)||(39010170-39010204)
chr4 (29-63)||(51039149-51039183)
chr4 (29-63)||(52430881-52430915)
chr4 (28-69)||(5208359-5208400)
chr4 (16-61)||(13263417-13263462)
chr4 (27-68)||(13267509-13267550)
chr4 (30-59)||(23690250-23690279)
chr4 (30-63)||(28676175-28676208)
chr4 (30-63)||(29973071-29973104)
chr4 (30-63)||(29974350-29974383)
chr4 (28-69)||(37775459-37775500)
chr4 (28-69)||(39449171-39449212)
chr4 (8-67)||(40786204-40786260)
chr4 (30-59)||(45618028-45618057)
chr4 (28-69)||(50890106-50890146)
chr4 (28-69)||(53662460-53662501)
chr4 (30-67)||(54771594-54771631)
chr4 (28-68)||(1796365-1796405)
chr4 (29-69)||(4896533-4896573)
chr4 (29-69)||(9162064-9162104)
chr4 (29-69)||(12241056-12241096)
chr4 (33-69)||(14089932-14089968)
chr4 (27-63)||(18568846-18568882)
chr4 (28-68)||(24088596-24088636)
chr4 (21-69)||(27407958-27408006)
chr4 (31-63)||(30042138-30042170)
chr4 (29-69)||(33820369-33820409)
chr4 (32-68)||(34259814-34259850)
chr4 (28-72)||(35037604-35037648)
chr4 (28-68)||(51377325-51377365)
chr4 (28-68)||(55268033-55268073)
[»] scaffold0662 (1 HSPs)
scaffold0662 (29-68)||(1077-1116)
[»] chr5 (34 HSPs)
chr5 (27-70)||(14914369-14914412)
chr5 (30-63)||(4098627-4098660)
chr5 (27-68)||(8959159-8959200)
chr5 (29-69)||(125090-125130)
chr5 (28-68)||(3154675-3154715)
chr5 (32-68)||(14508193-14508229)
chr5 (21-69)||(17574110-17574158)
chr5 (28-68)||(26685528-26685568)
chr5 (28-68)||(26955259-26955299)
chr5 (29-69)||(29803223-29803263)
chr5 (29-69)||(34428158-34428198)
chr5 (29-69)||(36572689-36572729)
chr5 (33-67)||(14716113-14716147)
chr5 (30-64)||(29227720-29227754)
chr5 (29-63)||(42699061-42699095)
chr5 (31-72)||(1774318-1774359)
chr5 (30-63)||(16143394-16143427)
chr5 (28-69)||(19844341-19844382)
chr5 (27-68)||(25585343-25585384)
chr5 (28-69)||(28811427-28811468)
chr5 (28-69)||(32872930-32872971)
chr5 (15-68)||(35814452-35814504)
chr5 (21-74)||(37821022-37821075)
chr5 (28-68)||(9240263-9240303)
chr5 (28-68)||(9594477-9594517)
chr5 (29-69)||(9636191-9636231)
chr5 (6-66)||(12612906-12612966)
chr5 (29-69)||(15953066-15953106)
chr5 (28-68)||(18695317-18695357)
chr5 (37-69)||(19526743-19526775)
chr5 (16-68)||(30640789-30640841)
chr5 (29-69)||(38500941-38500981)
chr5 (27-63)||(39788737-39788773)
chr5 (28-68)||(42446323-42446363)
[»] scaffold0154 (1 HSPs)
scaffold0154 (29-63)||(19724-19758)
[»] scaffold0041 (1 HSPs)
scaffold0041 (30-63)||(34412-34445)
[»] scaffold0016 (1 HSPs)
scaffold0016 (28-69)||(204477-204518)
[»] scaffold0011 (1 HSPs)
scaffold0011 (29-69)||(219697-219737)
[»] scaffold0003 (1 HSPs)
scaffold0003 (28-68)||(337117-337157)


Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 6 - 250
Target Start/End: Original strand, 33511723 - 33511967
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttgttaagaaggaaatgtattgtacaagaagttcatga 105  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33511723 agagagaagaagaatgttgtcccaaaagttttcacaaaatagttgtacaaatatcattactcttgttaagaaggaagtgtattgtacaagaagttcatga 33511822  T
Q  106 gttctatgctttgaaagatctcgagtttcgttctgtttgtttttgtgtgttttgaagagagcaattattgttgctttttgtatctgctaatcactttgat 205  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33511823 gttctatgatttgaaagatctcgagtttcgctctgtttgtttttgtgtgttttgaagagagcaattattgttgctttttgtatctgctaatcactttgat 33511922  T
Q  206 gttcaagtgttctatcatttttatctattatatttattgttaccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  33511923 gttcaagtgttctatcatttttatctattatatttattgttaccc 33511967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 36497699 - 36497659
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  36497699 aaaagttgtcacaaaatagttgtacaaatatcatttctctt 36497659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 11138944 - 11138911
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||||||||||||    
T  11138944 aaagttgtcacaaaatagttgtacaaatatcatt 11138911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 34247896 - 34247957
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||| || || ||||| |||||||||||| |||||  |||||||||||||||||||||    
T  34247896 agagagaacaacaaggttgtcccaaaagttgtctcaaaagggttgtacaaatatcattactc 34247957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 72
Target Start/End: Original strand, 11097153 - 11097197
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactcttgtt 72  Q
    ||||||||||||| |||| ||||||||||||||||||||| ||||    
T  11097153 caaaagttgtcactaaatggttgtacaaatatcattactcatgtt 11097197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 8143242 - 8143281
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||||||||||||||||| ||| ||||    
T  8143242 aaaagttgtcacaaaatagttgtacaaatattatttctct 8143281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 14228746 - 14228711
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||| |||||||||||||||||||||||||||    
T  14228746 caaaagttatcacaaaatagttgtacaaatatcatt 14228711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Original strand, 18550116 - 18550163
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  18550116 gttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactct 18550163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 37562174 - 37562213
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  37562174 aaaagttgtcacataatagttgtacaaatatcatttctct 37562213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 40413372 - 40413411
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  40413372 aaagttgtcacaaaataattgtacaaatatcatttctctt 40413411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 102382 - 102344
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  102382 aaaagttgtaacaaaatggttgtacaaatatcattactc 102344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 38844823 - 38844857
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  38844823 aaaagttgtcacaaaatggttgtacaaatatcatt 38844857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 40528786 - 40528752
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||| |||||||||||    
T  40528786 aaaagttgtcacaaaatagttgttcaaatatcatt 40528752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 5771908 - 5771949
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||| ||||| ||||||||||| |||||    
T  5771908 caaaagttgtcacaaaatggttgttcaaatatcatttctctt 5771949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 13592805 - 13592764
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  13592805 caaaagttgtcaaaaaataggtgtacaaatatcatttctctt 13592764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 20288572 - 20288531
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  20288572 caaaagttgtcacaaattggttgtacaaatatcatttctctt 20288531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 21075201 - 21075160
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  21075201 caaaagttgtcacaaattggttgtacaaatatcatttctctt 21075160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 26294227 - 26294186
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactcttg 70  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||    
T  26294227 aaaagttgtcacaaaatggttgtaccaatatcatttctcttg 26294186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 26307484 - 26307443
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactcttg 70  Q
    ||||||||||||||||| ||||||| ||||||||| ||||||    
T  26307484 aaaagttgtcacaaaatggttgtaccaatatcatttctcttg 26307443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 36064070 - 36064029
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||||  |||||||||||||||| ||||    
T  36064070 ccaaaagttgtcacaaaatgattgtacaaatatcatttctct 36064029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 40380320 - 40380279
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  40380320 caaaagttgtcataaaatagatgtacaaatatcatttctctt 40380279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 41746859 - 41746818
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||| | ||||||||||||||||||| |||||    
T  41746859 caaaagttgtcacagattagttgtacaaatatcatttctctt 41746818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 102465 - 102501
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  102465 ccaaaagttgtcacaaaatggttgttcaaatatcatt 102501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 1248298 - 1248250
Alignment:
Q  22 ttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttg 70  Q
    |||| ||||||||||| | ||||| ||||||||||||||||| ||||||    
T  1248298 ttgtcccaaaagttgtaagaaaatggttgtacaaatatcatttctcttg 1248250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 6004982 - 6004942
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||||||| ||||||||||||||||||| |||||    
T  6004982 aaaaattgtcacaaagtagttgtacaaatatcatttctctt 6004942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 7129573 - 7129541
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatat 59  Q
    ||||||||||||||||||| |||||||||||||    
T  7129573 ccaaaagttgtcacaaaatggttgtacaaatat 7129541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 12045686 - 12045726
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| |||| ||||||||||||||||| |||||    
T  12045686 aaaagttgtcactaaatggttgtacaaatatcatttctctt 12045726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 13540836 - 13540800
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    |||||||| |||| |||||||||||||||||||||||    
T  13540836 caaaagttatcactaaatagttgtacaaatatcatta 13540800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 13683637 - 13683673
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    |||||||| |||| |||||||||||||||||||||||    
T  13683637 caaaagttatcactaaatagttgtacaaatatcatta 13683673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 14233667 - 14233707
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactcttg 70  Q
    |||||||| | ||||||||||||||||||||||| ||||||    
T  14233667 aaagttgtaaaaaaatagttgtacaaatatcatttctcttg 14233707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 21273745 - 21273777
Alignment:
Q  31 aagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||| |||||||||||||||||    
T  21273745 aagttgtcacaaaatggttgtacaaatatcatt 21273777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 21649104 - 21649056
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||||||||  ||||| |||||| |||||||||||||||||    
T  21649104 gttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 21649056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 28927719 - 28927679
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  28927719 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 28927679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 35937543 - 35937579
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  35937543 ccaaaagttgttacaaaatggttgtacaaatatcatt 35937579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 38128809 - 38128849
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||| ||||||||||| ||||| |||||    
T  38128809 aaaagttgtcacaaaatggttgtacaaatgtcatttctctt 38128849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 39021476 - 39021516
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||| ||||||||| ||||||||||||||||| |||||    
T  39021476 aaaagttatcacaaaatggttgtacaaatatcatttctctt 39021516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 41776312 - 41776360
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||||||||  ||||| |||||| |||||||||||||||||    
T  41776312 gttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 41776360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 44380651 - 44380687
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  44380651 gttgtcacaaaatggttgtacaaatatcatttctctt 44380687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 45101434 - 45101394
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  45101434 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 45101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 70
Target Start/End: Complemental strand, 28508530 - 28508476
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttg 70  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  28508530 agaaggttgtcccaaaagttgtcacaaaatggttgtacaaatatcattactcttg 28508476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 8757666 - 8757728
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||| || || |||||||||||||||||  |||||||||||| ||||||||||||||||    
T  8757666 agagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactct 8757728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 72
Target Start/End: Original strand, 14140370 - 14140413
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactcttgtt 72  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  14140370 aaaagttgtcacaaattagttgtacaaatatcatttctcttgtt 14140413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 67
Target Start/End: Original strand, 43621980 - 43622019
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  43621980 caaaagttgtcataaaatagttgtacaaatatcattactc 43622019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 14957714 - 14957776
Alignment:
Q  6 agagagaagaagaatgttgtacc-aaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    ||||||||| |||| ||||| || |||||||||||||||||||||||| ||||| ||||||||    
T  14957714 agagagaagtagaaggttgtccccaaaagttgtcacaaaatagttgtataaataacattactc 14957776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 35518397 - 35518459
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||| || || ||||| |||||||||||  |||||||||||| ||||||||||||||||    
T  35518397 agagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactct 35518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 35171247 - 35171299
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||||||||| |||||||||||| ||||||||||||||||| |||||    
T  35171247 agaaagttgtaccaaaa-ttgtcacaaaatggttgtacaaatatcatttctctt 35171299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 36909874 - 36909915
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  36909874 ccaaaagttgtcacaaaatggttgtacaaatatcatttctct 36909915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 22303242 - 22303207
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||| |||||||||||||||||||||||    
T  22303242 caaaagttgtcaaaaaatagttgtacaaatatcatt 22303207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 29795484 - 29795445
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  29795484 aaagttgtcacaaaatggttgtacaaatatcatttctctt 29795445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 3091779 - 3091745
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||| |||||||||||||||||||||||||||    
T  3091779 aaaagttatcacaaaatagttgtacaaatatcatt 3091745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 14891112 - 14891150
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  14891112 aaagttatcacaaaatagttgtacaaatatcatttctct 14891150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 31629650 - 31629608
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||    
T  31629650 gttgttccaaaagttgtcaaaaagtagttgtacaaatatcatt 31629608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 5031962 - 5031921
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||| ||||||| ||||||||||||||||| |||||    
T  5031962 caaaagttgttacaaaatggttgtacaaatatcatttctctt 5031921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 11548069 - 11548106
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  11548069 aaagttgtcataaaataattgtacaaatatcattactc 11548106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 18531640 - 18531599
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||| ||||||||||||||||||||||| |||||    
T  18531640 caaaaattgtcaaaaaatagttgtacaaatatcatttctctt 18531599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 29168764 - 29168723
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||| ||||||||||||||||| |||||    
T  29168764 caaaagttgtcaaaaaatggttgtacaaatatcatttctctt 29168723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 30220836 - 30220877
Alignment:
Q  22 ttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||| ||||||||| ||||| |||||||||||||||||||||    
T  30220836 ttgtcccaaaagttatcacagaatagttgtacaaatatcatt 30220877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 62
Target Start/End: Complemental strand, 44018101 - 44018068
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcat 62  Q
    ||||||||||||||||| ||||||||||||||||    
T  44018101 aaaagttgtcacaaaatggttgtacaaatatcat 44018068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 3299138 - 3299178
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  3299138 aaaagttgtcataaaatggttgtacaaatatcatttctctt 3299178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 4738605 - 4738645
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  4738605 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 4738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 5067679 - 5067719
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| ||| ||||||||||||||| |||||    
T  5067679 aaaagttgtcacaaagtagatgtacaaatatcatttctctt 5067719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 14857784 - 14857752
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcattac 65  Q
    ||||||||||||| |||||||||||||||||||    
T  14857784 gttgtcacaaaatggttgtacaaatatcattac 14857752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 18510714 - 18510674
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||| ||||||||||| ||||||||||| ||||    
T  18510714 caaaagttgtcaaaaaatagttgttcaaatatcatttctct 18510674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 28494910 - 28494858
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||| ||||| |||||||||||   ||||||||||||||||||||||| ||||    
T  28494910 agaaagttgttccaaaagttgtttaaaaatagttgtacaaatatcatttctct 28494858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 31296882 - 31296918
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  31296882 gttgtcacaaaatggttgtacaaatatcatttctctt 31296918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 32755822 - 32755862
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||| |||||| |||||||| ||||||    
T  32755822 caaaagttgtcacaaaatggttgtagaaatatcactactct 32755862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 33296104 - 33296144
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  33296104 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 33296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 36383501 - 36383461
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||||  |||||||||||||||| ||||    
T  36383501 caaaagttgtcacaaaatctttgtacaaatatcatttctct 36383461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 36802947 - 36802895
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||| |||||| |||||||||||||||||| | ||| ||||||||||| ||||    
T  36802947 agaaagttgtagcaaaagttgtcacaaaatggatgttcaaatatcatttctct 36802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 66
Target Start/End: Complemental strand, 37109307 - 37109275
Alignment:
Q  34 ttgtcacaaaatagttgtacaaatatcattact 66  Q
    |||| ||||||||||||||||||||||||||||    
T  37109307 ttgttacaaaatagttgtacaaatatcattact 37109275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 39449137 - 39449189
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||| |||||| |||||||||||||||||| | ||| ||||||||||| ||||    
T  39449137 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 39449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 45202066 - 45202018
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||||||||  ||||| |||||| |||||||||||||||||    
T  45202066 gttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 45202018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 9027735 - 9027798
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||| || || |||||||||||||||||  |||||||||||| |||||||||||||||||    
T  9027735 agagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactctt 9027798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 47683912 - 47683974
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||  |||| |||||  |||||||||||||||||| ||||||||||||||||||||||    
T  47683912 agagagaaagagaaggttgtctcaaaagttgtcacaaaatggttgtacaaatatcattactct 47683974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 3775871 - 3775932
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||||||||| ||||| |||||||||||| |||||||| |||||| || |||||||||    
T  3775871 agagagaagaagaaggttgtcccaaaagttgtcgcaaaataggtgtacacatgtcattactc 3775932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 43149292 - 43149231
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||| || || |||||||||||||||||  |||||||||||| |||||||||||||||    
T  43149292 agagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 43149231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 7867744 - 7867784
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  7867744 aaaagttgtcacaaaatagttgtacaaatatcatttctctt 7867784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 8254077 - 8254025
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  8254077 agaaagttgtaccaaa-gttgtcacaaaatggttgtacaaatatcatttctctt 8254025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 44855290 - 44855249
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  44855290 caaaagttgtcacaaaatagttatacaaatatcatttctctt 44855249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 48405449 - 48405408
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  48405449 caaaagttgtcacaaaatggttgtacaaatatcatttctctt 48405408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 50559244 - 50559285
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  50559244 caaaagttgtcaaaaaatagttgtacaaatatcatttctctt 50559285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 1295372 - 1295336
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||| |||||||||||||||||||||||||||    
T  1295372 ccaaaagttatcacaaaatagttgtacaaatatcatt 1295336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 38944173 - 38944213
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  38944173 caaaagttgtcacaaattagttgtacaaatatcatttctct 38944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 43169775 - 43169815
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  43169775 aaaagttgtcacaaaatggttgtacaaatatcatttctctt 43169815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 45528975 - 45529015
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  45528975 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 45529015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 49031472 - 49031436
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattact 66  Q
    |||||| ||||||||||||||||||||||||||||||    
T  49031472 aaagttatcacaaaatagttgtacaaatatcattact 49031436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 11327147 - 11327112
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||| |||||||||||||||||    
T  11327147 caaaagttgtcacaaaatggttgtacaaatatcatt 11327112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 47101561 - 47101526
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||| |||||||||||||||||    
T  47101561 caaaagttgtcacaaaatggttgtacaaatatcatt 47101526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 49196733 - 49196694
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  49196733 aaagttgtcacaaaatggttgtacaaatatcatttctctt 49196694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 462434 - 462468
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  462434 aaaagttgtcacaaaatggttgtacaaatatcatt 462468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 32187179 - 32187145
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  32187179 aaaagttgtcacaaaatggttgtacaaatatcatt 32187145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 43977059 - 43977017
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||||||||||| |||||| ||| |||||    
T  43977059 ccaaaagttgtcacaaaatagttgtataaatataatttctctt 43977017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 45205326 - 45205292
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||| ||||||||||||||||||||||||||||||    
T  45205326 aaaaattgtcacaaaatagttgtacaaatatcatt 45205292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 47683838 - 47683800
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  47683838 aaagttgtcacaaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 53932422 - 53932464
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||| |||||||||||| ||||||||||||||||| |||||    
T  53932422 ccaaaaattgtcacaaaatggttgtacaaatatcatttctctt 53932464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 30554 - 30587
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||| ||||||||||    
T  30554 aaagttgtcacaaaatagttgtaaaaatatcatt 30587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 30400188 - 30400229
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  30400188 caaaagttgtcacaaatttgttgtacaaatatcatttctctt 30400229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 32146018 - 32146059
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||||||| ||||||||||| |||||    
T  32146018 caaaagttgtcaaaaaatagttgttcaaatatcatttctctt 32146059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 36818995 - 36818954
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  36818995 caaaagttgtcacaaattggttgtacaaatatcatttctctt 36818954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 61
Target Start/End: Original strand, 41637312 - 41637345
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatca 61  Q
    |||||||||||| |||||||||||||||||||||    
T  41637312 caaaagttgtcaaaaaatagttgtacaaatatca 41637345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 50652428 - 50652387
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||| ||||| ||||||||||||||||| ||||    
T  50652428 ccaaaagttgtcataaaatggttgtacaaatatcatttctct 50652387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 1901959 - 1901999
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  1901959 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 1901999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 1911405 - 1911445
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  1911405 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 1911445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 18169195 - 18169155
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  18169195 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 18169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 74
Target Start/End: Original strand, 29057600 - 29057652
Alignment:
Q  22 ttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    |||| ||||||||| |||||||||  || ||||||||||||||||| ||||||    
T  29057600 ttgtgccaaaagttatcacaaaatgattttacaaatatcattactcatgttaa 29057652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 29846825 - 29846777
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||||||||  ||||| |||||| |||||||||||||||||    
T  29846825 gttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 29846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 32931950 - 32931990
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  32931950 caaaagttgtcacaaattggttgtacaaatatcatttctct 32931990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 35376584 - 35376624
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||||||||| ||||||||||||||||| |||||    
T  35376584 aaaaattgtcacaaaatggttgtacaaatatcatttctctt 35376624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Complemental strand, 35987286 - 35987254
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatca 61  Q
    ||||||| |||||||||||||||||||||||||    
T  35987286 aaaagttatcacaaaatagttgtacaaatatca 35987254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 39629871 - 39629907
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    |||||||||| | ||||||||||||||||||||||||    
T  39629871 caaaagttgtaaaaaaatagttgtacaaatatcatta 39629907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 40159871 - 40159911
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| | ||||||||||||||||||||||| |||||    
T  40159871 aaaagttgttagaaaatagttgtacaaatatcatttctctt 40159911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 43460510 - 43460578
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    |||||||| | ||| | ||| ||||||||||||||||||  ||||||||||||||| || |||| ||||    
T  43460510 agagagaaaatgaaggctgtcccaaaagttgtcacaaaaaggttgtacaaatatcactattctttttaa 43460578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 48117473 - 48117521
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||||||||  ||||| |||||| |||||||||||||||||    
T  48117473 gttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 48117521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 7295589 - 7295651
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||| || || ||||| |||||||||||| ||||| |||||||||||||||||||||||    
T  7295589 agagagaataacaaggttgttccaaaagttgtctcaaaaaagttgtacaaatatcattactct 7295651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Original strand, 43255599 - 43255645
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  43255599 caaaaattgtcacaaaataattgtacaaatatcattactcttgttaa 43255645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 7458201 - 7458258
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||  ||||  ||||| ||||||||||||| ||||||||||||||||    
T  7458201 agagagaagaagaacattgtttcaaaaattgtcacaaaataattgtacaaatatcatt 7458258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 23680061 - 23680094
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||||||||||||    
T  23680061 aaagttgtcacaaaatagttgtacaaatatcatt 23680094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 4971328 - 4971288
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  4971328 aaaagttgtcacaaaatggttgtacaaatatcatttctctt 4971288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 2347080 - 2347126
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||| ||||||||||| ||||||||||||| |||||||||||||||||    
T  2347080 agaaagttgtaccaaa-gttgtcacaaaatggttgtacaaatatcatt 2347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 19426618 - 19426579
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||| ||||||||||||||||| ||||    
T  19426618 aaaagttgtcacaaaatggttgtacaaatatcatttctct 19426579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 26153685 - 26153650
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||| |||||||||||||||||||||||    
T  26153685 caaaagttgtcataaaatagttgtacaaatatcatt 26153650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Complemental strand, 33050222 - 33050187
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||| |||||||||||||||||    
T  33050222 caaaagttgtcacaaaatggttgtacaaatatcatt 33050187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 63
Target Start/End: Original strand, 37385265 - 37385300
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||| |||||||||||||||||||||||    
T  37385265 caaaagttgtcaaaaaatagttgtacaaatatcatt 37385300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 63
Target Start/End: Complemental strand, 37832485 - 37832454
Alignment:
Q  32 agttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||||||||||    
T  37832485 agttgtcacaaaatagttgtacaaatatcatt 37832454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 37856188 - 37856227
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  37856188 aaagttgtcacaaaatggttgtacaaatatcatttctctt 37856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 40693561 - 40693600
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  40693561 aaaagttgtcaaaaaatagttgtacaaatatcatttctct 40693600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 1790029 - 1789995
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||| ||||||||||||||||||||||||    
T  1790029 aaaagttgtcgcaaaatagttgtacaaatatcatt 1789995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 1814340 - 1814374
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||| ||||||||||||||||||||||||    
T  1814340 aaaagttgtcgcaaaatagttgtacaaatatcatt 1814374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 37355274 - 37355312
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  37355274 aaaagttgtctcaaaatagttgtacaaataccattactc 37355312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 41227107 - 41227065
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||||| ||||| |||||||||| |||||    
T  41227107 ccaaaagttgtcacaaaataattgtataaatatcatttctctt 41227065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 46725655 - 46725621
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||||||||| ||||||||||    
T  46725655 aaaagttgtcacaaaatagttgtataaatatcatt 46725621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 116681 - 116629
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| ||||||||||| |||| ||||||||||||||| |||||||||| |||||    
T  116681 agaaagttgtaccaaa-gttggcacaaaatagttgtataaatatcatttctctt 116629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 15564950 - 15564909
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| ||||| |||||||||||||||||||||||| |||||    
T  15564950 caaaaattgtcgcaaaatagttgtacaaatatcatttctctt 15564909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 28548253 - 28548294
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||  |||||||||||||||||||||||| |||||    
T  28548253 caaaagttgtaccaaaatagttgtacaaatatcatttctctt 28548294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 30864449 - 30864490
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  30864449 caaaagttgtcacaaattggttgtacaaatatcatttctctt 30864490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 34104884 - 34104823
Alignment:
Q  8 agagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| |||||  |||||||||| |  |||||| |||||||||||||||| ||||    
T  34104884 agagaagaagaaggttgttacaaaagttgttattaaatagctgtacaaatatcattattctt 34104823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 38547313 - 38547346
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||| |||||||||||||||||||||||    
T  38547313 aaagttgtcaaaaaatagttgtacaaatatcatt 38547346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 44511178 - 44511137
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||| ||||||| ||||||||| |||||    
T  44511178 caaaagttgtcacaaaatggttgtacgaatatcatttctctt 44511137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 5868334 - 5868366
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatc 60  Q
    |||||||||| ||||||||||||||||||||||    
T  5868334 caaaagttgttacaaaatagttgtacaaatatc 5868366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 10591074 - 10591034
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| |||||||||| ||||||||||| |||||    
T  10591074 aaaagttgtcaccaaatagttgttcaaatatcattgctctt 10591034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 11788416 - 11788376
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||||||  |||||||||||| |||||||||||||||    
T  11788416 ccaaaagttgtatcaaaatagttgttcaaatatcattactc 11788376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 13437237 - 13437197
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||| ||||| ||||||||||| ||||    
T  13437237 caaaagttgtcacaaaatggttgtgcaaatatcatttctct 13437197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 29763881 - 29763834
Alignment:
Q  15 aagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||| ||||||| ||||||| ||||||||| |||||||||||||||||    
T  29763881 aagaaagttgtac-aaaagttatcacaaaatggttgtacaaatatcatt 29763834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 31274562 - 31274602
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  31274562 aaaagttgtcacaaattggttgtacaaatatcatttctctt 31274602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 32315948 - 32316008
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattact 66  Q
    |||||||| || ||||||||  |||||||||||   |||||||||| ||||||||||||||    
T  32315948 agagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Original strand, 33223564 - 33223596
Alignment:
Q  31 aagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||| |||||||||||||||||    
T  33223564 aagttgtcacaaaatggttgtacaaatatcatt 33223596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 37392081 - 37392041
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  37392081 aaaagttgtcaaaaaatggttgtacaaatatcatttctctt 37392041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 45556013 - 45555973
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||||||||||||  ||||||| ||||    
T  45556013 caaaagttgtcacaaaatagttgtacatgtatcatttctct 45555973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 27334897 - 27334851
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27334897 caaaagttgtcacaaaatagttgtacaaatatcatttctctttttaa 27334851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 28 - 74
Target Start/End: Complemental strand, 27395637 - 27395591
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27395637 caaaagttgtcacaaaatagttgtacaaatatcatttctctttttaa 27395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 22422272 - 22422335
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||| || || |||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  22422272 agagagaacaacaaagttgtaccaaaagttgtaccaaaataattgttcaaatatcattactctt 22422335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 3339531 - 3339572
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  3339531 caaaagttgtcacaaaatggttgtacaaatatcatttctctt 3339572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 12441575 - 12441536
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  12441575 aaagttgtcacaaagtagttgtacaaatatcatttctctt 12441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 26391302 - 26391361
Alignment:
Q  13 agaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttgtt 72  Q
    |||||||  |||||| ||||||||| | ||||| ||||||||||||||||| ||||||||    
T  26391302 agaagaaaattgtacaaaaagttgttaaaaaatggttgtacaaatatcatttctcttgtt 26391361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 10840763 - 10840722
Alignment:
Q  22 ttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||| ||||||||||||| |||||| ||||||||||||||||    
T  10840763 ttgttccaaaagttgtcaaaaaataattgtacaaatatcatt 10840722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 12177614 - 12177581
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||||||| ||||    
T  12177614 aaagttgtcacaaaatagttgtacaaataacatt 12177581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 15318208 - 15318261
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||| |||||||||||||||||| | ||| ||||||||||| |||||    
T  15318208 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctctt 15318261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 25127865 - 25127906
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||| ||||||| ||||||||||||||||| |||||    
T  25127865 caaaagttgttacaaaatggttgtacaaatatcatttctctt 25127906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Original strand, 32457285 - 32457330
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    ||||||||||||||| | ||||||||||||||||| ||| ||||||    
T  32457285 aaaagttgtcacaaagtggttgtacaaatatcatttctcatgttaa 32457330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 32644660 - 32644627
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||| |||||||||||||||||||||||    
T  32644660 aaagttgtcaaaaaatagttgtacaaatatcatt 32644627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 32729927 - 32729882
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    ||||||||||| ||||| ||||||||||||||||| ||||| ||||    
T  32729927 aaaagttgtcagaaaatggttgtacaaatatcatttctctttttaa 32729882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 33421811 - 33421758
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||| |||||||||||||||||| | ||| ||||||||||| |||||    
T  33421811 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctctt 33421758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 3089011 - 3088971
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| |||| ||||||||||||||||| |||||    
T  3089011 aaaagttgtcactaaatggttgtacaaatatcatttctctt 3088971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 11785393 - 11785353
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||||||||| ||||||||||||||||| |||||    
T  11785393 aaaaattgtcacaaaatggttgtacaaatatcatttctctt 11785353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 12044370 - 12044330
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  12044370 aaaagttgtcaaaaaatagttgtataaatatcatttctctt 12044330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 15666806 - 15666846
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||| ||||||||||||||||| |||||    
T  15666806 aaaagttgtcagaaaatggttgtacaaatatcatttctctt 15666846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 15722536 - 15722576
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  15722536 aaaagttgtcacaaaatgattgtacaaatatcatttctctt 15722576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 20006731 - 20006671
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattact 66  Q
    |||||||| ||||| |||||  |||||||| |||| |||||||  ||||||||||||||||    
T  20006731 agagagaaaaagaaggttgtcacaaaagttatcaccaaatagtgatacaaatatcattact 20006671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 28965873 - 28965913
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| ||||||| ||||||||||||||||| |||||    
T  28965873 aaaagttgtaacaaaatggttgtacaaatatcatttctctt 28965913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 75
Target Start/End: Complemental strand, 18610811 - 18610765
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactcttgttaag 75  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  18610811 aaaagttgtcacaaaatagttgtacaaatatcatttctctttttaag 18610765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 7420758 - 7420819
Alignment:
Q  8 agagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| || ||||| | |||||||||||| ||||| ||||||||||||||||||||||    
T  7420758 agagaagaaaaaagttgtcctaaaagttgtcacgaaataattgtacaaatatcattactctt 7420819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 10435824 - 10435871
Alignment:
Q  22 ttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||    
T  10435824 ttgtaccaaaagttgtcacaaaatggttgtacgaatatcatttctctt 10435871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 48634408 - 48634362
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  48634408 gttgtcccaaaagttgtcacaaaatagttgtacagatatcatcactc 48634362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 6829815 - 6829856
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||||| |||||    
T  6829815 caaaagttgtcacaaattagttgtacaaatatcatttctctt 6829856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 7078532 - 7078573
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||||| ||||||||||||||| |||||    
T  7078532 caaaagttgtcacaaaatagatgtacaaatatcatttctctt 7078573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 26585205 - 26585246
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||| ||||||||||||||||||||||||||| |||||    
T  26585205 caaaagttatcacaaaatagttgtacaaatatcatttctctt 26585246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 27447319 - 27447266
Alignment:
Q  15 aagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||| | |||||| ||||||||||| |||| ||||||||||||||||||    
T  27447319 aagaatgttatcccaaaaattgtcacaaaagagttttacaaatatcattactct 27447266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 37947169 - 37947112
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||| || || ||||| ||||||||||| ||||||||||||| |||||||||||    
T  37947169 agagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatcatt 37947112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 42256510 - 42256458
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||    
T  42256510 agaaagttgtaccaaa-gttgtcacaaaatggttgtacaaatatcatttctctt 42256458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 8934629 - 8934669
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||||||||||||||| ||| |||||    
T  8934629 aaaagttgtcacaaaatagttgtacaaatataatttctctt 8934669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 9011682 - 9011643
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  9011682 aaagttgtcacaaaatggttgtacaaatatcatttctctt 9011643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 27687542 - 27687581
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  27687542 aaagttgtcacaaaatggttgtacaaatatcatttctctt 27687581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 40596077 - 40596116
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  40596077 aaagttgtcacaaaatggttgtacaaatatcatttctctt 40596116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 59
Target Start/End: Original strand, 50145833 - 50145864
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatat 59  Q
    ||||||||||||||||||||||||||||||||    
T  50145833 caaaagttgtcacaaaatagttgtacaaatat 50145864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 9882696 - 9882726
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||||||||||||||||    
T  9882696 gttgtcacaaaatagttgtacaaatatcatt 9882726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Complemental strand, 27352670 - 27352628
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| ||||||||| ||||||||||||||||| |||||    
T  27352670 ccaaaagttatcacaaaatggttgtacaaatatcatttctctt 27352628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 30198044 - 30198010
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||| ||||||||||||||||||||||||||||||    
T  30198044 aaaatttgtcacaaaatagttgtacaaatatcatt 30198010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 38627370 - 38627332
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  38627370 aaaagttatcacaaaatagatgtacaaatatcattactc 38627332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 40612150 - 40612112
Alignment:
Q  31 aagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| ||||||||||||||||| |||||    
T  40612150 aagttgtcacaaaatggttgtacaaatatcatttctctt 40612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 41507217 - 41507259
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactcttgtt 72  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||    
T  41507217 aaagttgtcacaaaatggttgtacaaatatcatttctcatgtt 41507259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 50035570 - 50035604
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  50035570 aaaagttgtcacaaaatggttgtacaaatatcatt 50035604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 3977592 - 3977559
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||| |||||||||||||||    
T  3977592 aaagttgtcacaaaatagatgtacaaatatcatt 3977559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 11097916 - 11097957
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||| | ||||||||||||||| |||||    
T  11097916 caaaagttgtcacaaaatggatgtacaaatatcatttctctt 11097957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 11947834 - 11947793
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||| ||||||||||||||||| |||||    
T  11947834 caaaagttgtcataaaatggttgtacaaatatcatttctctt 11947793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 21433433 - 21433474
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||| ||||||| ||||||||||||||||| |||||    
T  21433433 caaaagttgttacaaaatggttgtacaaatatcatttctctt 21433474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 29489380 - 29489432
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| ||||||||||| ||| ||||||||| ||||||||||||||||| |||||    
T  29489380 agaaagttgtaccaaa-gttatcacaaaatggttgtacaaatatcatttctctt 29489432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 35224239 - 35224280
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||| |||||||||||||||||||||||||| ||||    
T  35224239 caaaaattgtaacaaaatagttgtacaaatatcattattctt 35224280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 35883639 - 35883680
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| |||||| |||||||||||||||| |||||    
T  35883639 caaaagttgtcaaaaaataattgtacaaatatcatttctctt 35883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 37588695 - 37588748
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||| |||||||||||||||||||  ||| ||||||||||| |||||    
T  37588695 agaaagttgtaacaaaagttgtcacaaaataaatgttcaaatatcatttctctt 37588748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 1690484 - 1690444
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||| ||||||||||||| ||| |||||    
T  1690484 aaaagttgtcacaaaatggttgtacaaatattatttctctt 1690444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 7188399 - 7188435
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattact 66  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  7188399 aaagttgtcacgaaatagttgcacaaatatcattact 7188435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 9882591 - 9882555
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  9882591 caaaagttgtcaccaaataattgtacaaatatcatta 9882555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 10384245 - 10384209
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||||||||||||||||| |||||    
T  10384245 gttgtcacaaagtagttgtacaaatatcatttctctt 10384209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 14442293 - 14442265
Alignment:
Q  34 ttgtcacaaaatagttgtacaaatatcat 62  Q
    |||||||||||||||||||||||||||||    
T  14442293 ttgtcacaaaatagttgtacaaatatcat 14442265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 37848558 - 37848594
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  37848558 caaaagttgttacaaaatagttatacaaatatcatta 37848594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 41619095 - 41619059
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  41619095 caaaagttatcaaaaaatagttgtacaaatatcatta 41619059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 49425777 - 49425737
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  49425777 caaaagttgtcacaaagtggttgtacaaatatcatttctct 49425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 50226912 - 50226952
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  50226912 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 50226952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 45678385 - 45678446
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||| || || |||||||||||||||||  |||||||||||| |||||||||||||||    
T  45678385 agagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 45678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 33093138 - 33093177
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  33093138 aaagttgtcacaaaatagttgtacaaatatcatttctctt 33093177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 35017191 - 35017152
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  35017191 aaaagttgtcacaaaatagttgtacaaatatcatttctct 35017152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 47014977 - 47014938
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  47014977 aaaagttgtcacaaaatagttgtacaaatatcatttctct 47014938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 34259948 - 34260010
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||| |||||  ||||  ||||||||||||| |||| ||||||||||||||||||||||    
T  34259948 agagagaaaaagaagtttgtcacaaaagttgtcaccaaatggttgtacaaatatcattactct 34260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 49371067 - 49371121
Alignment:
Q  13 agaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    ||||||| ||||| ||||||||||||| || || |||||||||||||||||||||    
T  49371067 agaagaaggttgtcccaaaagttgtcataacatggttgtacaaatatcattactc 49371121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 8455900 - 8455859
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||||||||||||||| |||| |||||    
T  8455900 caaaagttgtcacaaaatagttgtacaaataacatttctctt 8455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 41495053 - 41495012
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  41495053 ccaaaagttgtcacataatagttgtacaaatatcatttctct 41495012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 42815443 - 42815402
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||| ||||||||||||||||||||||||| |||||    
T  42815443 caaaagttgttacaaaatagttgtacaaatatcatttctctt 42815402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 940292 - 940332
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||||||||||||||||||||||||||| |||||    
T  940292 aaaaattgtcacaaaatagttgtacaaatatcatttctctt 940332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 9096073 - 9096121
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||  ||||||| |||| |||||||||||||||||    
T  9096073 gttgtaccaaaagttgtatcaaaataattgttcaaatatcattactctt 9096121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 33278713 - 33278673
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||||||| ||||||||||| |||||    
T  33278713 aaaagttgtcacaaaatagttgttcaaatatcatttctctt 33278673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 38864769 - 38864809
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||| |||||||||||||||| |||||    
T  38864769 aaaagttgtcacaaaataattgtacaaatatcatttctctt 38864809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 42853977 - 42853937
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  42853977 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 42853937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 44272843 - 44272883
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  44272843 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 44272883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 51359822 - 51359862
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||| ||||||||||||||||| ||||    
T  51359822 caaaagttgtcacaaaatggttgtacaaatatcatttctct 51359862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 73
Target Start/End: Original strand, 32365690 - 32365733
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactcttgtta 73  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  32365690 aaagttgtcacaaaatggttgtacaaatatcatttctcatgtta 32365733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 41262652 - 41262691
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||| |||||||||||||||| |||||    
T  41262652 aaagttgtcacaaaataattgtacaaatatcatttctctt 41262691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 54036552 - 54036591
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  54036552 aaagttgtcacaaaatggttgtacaaatatcatttctctt 54036591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 169535 - 169569
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  169535 aaaagttgtcacaaaatggttgtacaaatatcatt 169569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 69
Target Start/End: Complemental strand, 6290498 - 6290460
Alignment:
Q  31 aagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  6290498 aagttgttacaaaatagttgtacaaatatcatttctctt 6290460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 12694461 - 12694495
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  12694461 aaaagttgtcacaaaatggttgtacaaatatcatt 12694495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 33484139 - 33484181
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||| || ||||||||| |||||||||||||||||||||||    
T  33484139 ccaaaaattatcacaaaatggttgtacaaatatcattactctt 33484181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 39010170 - 39010204
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  39010170 aaaagttgtcacaaaatggttgtacaaatatcatt 39010204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 51039149 - 51039183
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||| |||||||||||||||||||    
T  51039149 aaaagttgtcacaaagtagttgtacaaatatcatt 51039183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 52430915 - 52430881
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||| |||||||||||||||||||||||    
T  52430915 aaaagttgtcataaaatagttgtacaaatatcatt 52430881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 5208359 - 5208400
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  5208359 caaaagttgtcacaaattggttgtacaaatatcatttctctt 5208400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 13263417 - 13263462
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatca 61  Q
    |||| |||||| |||||||||||||||||||| ||| |||||||||    
T  13263417 agaaagttgtagcaaaagttgtcacaaaatagatgttcaaatatca 13263462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 13267509 - 13267550
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||| |||||||||||| ||||||||||||||||| ||||    
T  13267509 ccaaaatttgtcacaaaatggttgtacaaatatcatttctct 13267550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 23690279 - 23690250
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatat 59  Q
    ||||||||||||||||||||||||||||||    
T  23690279 aaagttgtcacaaaatagttgtacaaatat 23690250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 28676175 - 28676208
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||| |||||||||||||||||    
T  28676175 aaagttgtcacaaaatggttgtacaaatatcatt 28676208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 29973071 - 29973104
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||| |||||||||||||||||    
T  29973071 aaagttgtcacaaaattgttgtacaaatatcatt 29973104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Original strand, 29974350 - 29974383
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||||||| |||||||||||    
T  29974350 aaagttgtcacaaaatagttgttcaaatatcatt 29974383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 37775459 - 37775500
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||| | |||||||||||| ||||||||||||||||    
T  37775459 caaaagttgtaataaaatagttgtagaaatatcattactctt 37775500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 39449212 - 39449171
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||| |||||||||||||||| |||||||||| |||||    
T  39449212 caaaagttatcacaaaatagttgtataaatatcatttctctt 39449171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 40786260 - 40786204
Alignment:
Q  8 agagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    ||||||||||||||||   ||||||||| ||||||||| ||||| |||||| ||||||||    
T  40786260 agagaagaagaatgtt---ccaaaagttttcacaaaatggttgtccaaataacattactc 40786204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 59
Target Start/End: Complemental strand, 45618057 - 45618028
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatat 59  Q
    ||||||||||||||||||||||||||||||    
T  45618057 aaagttgtcacaaaatagttgtacaaatat 45618028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 50890106 - 50890146
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  50890106 caaaagttgtca-aaaatagttgtacaaatatcatttctctt 50890146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 53662460 - 53662501
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||| ||||||||||||||||||||||||| |||||    
T  53662460 caaaaattgttacaaaatagttgtacaaatatcatttctctt 53662501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 54771594 - 54771631
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||||||||||||| ||||||| |||||||||||||    
T  54771594 aaagttgtcacaaaatggttgtacgaatatcattactc 54771631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 1796405 - 1796365
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  1796405 caaaagttgtcacaaattggttgtacaaatatcatttctct 1796365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 4896533 - 4896573
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  4896533 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 4896573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 9162104 - 9162064
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||||  |||||||||||||||| |||||    
T  9162104 aaaagttgtcacaaaatgattgtacaaatatcatttctctt 9162064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 12241096 - 12241056
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| | ||||||||||||||||||||||| |||||    
T  12241096 aaaagttgttagaaaatagttgtacaaatatcatttctctt 12241056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 14089968 - 14089932
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||| |||||||||||| |||||||||||||||||    
T  14089968 gttgtcccaaaatagttgttcaaatatcattactctt 14089932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 18568846 - 18568882
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  18568846 ccaaaagttgtcacaaaatggttgtataaatatcatt 18568882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 24088596 - 24088636
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||| ||||| ||||||||||||||||| ||||    
T  24088596 caaaagttgtcataaaatggttgtacaaatatcatttctct 24088636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 27408006 - 27407958
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| |||||||| |||||  |||||||||| ||||||||||||    
T  27408006 gttgtaccacaagttgtctcaaaagggttgtacaaagatcattactctt 27407958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 63
Target Start/End: Complemental strand, 30042170 - 30042138
Alignment:
Q  31 aagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||| |||||||||||||||||    
T  30042170 aagttgtcacaaaatggttgtacaaatatcatt 30042138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 33820369 - 33820409
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||| | ||||||||||||||||||||||| |||||    
T  33820369 aaaagttgttagaaaatagttgtacaaatatcatttctctt 33820409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 34259850 - 34259814
Alignment:
Q  32 agttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  34259850 agttgtcacaaaatggttgtacaaatatcatttctct 34259814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 72
Target Start/End: Complemental strand, 35037648 - 35037604
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactcttgtt 72  Q
    ||||||||||  |||||| ||||||||||||||||| ||||||||    
T  35037648 caaaagttgtatcaaaatggttgtacaaatatcatttctcttgtt 35037604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 51377325 - 51377365
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  51377325 caaaagttgtcacaaattggttgtacaaatatcatttctct 51377365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 55268033 - 55268073
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  55268033 caaaagttgtcacaaattggttgtacaaatatcatttctct 55268073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0662 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 1116 - 1077
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  1116 aaaagttgtcacaaaatagttgtacaaatatcatttctct 1077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000002; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 70
Target Start/End: Complemental strand, 14914412 - 14914369
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactcttg 70  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||    
T  14914412 ccaaaagttgtcacaaaatggttgtacaaatatcatttctcttg 14914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 4098660 - 4098627
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||||||||||||||||||||    
T  4098660 aaagttgtcacaaaatagttgtacaaatatcatt 4098627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 8959200 - 8959159
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  8959200 ccaaaagttgtcacataatagttgtacaaatatcatttctct 8959159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 125130 - 125090
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  125130 aaaagttgtcacaaagtagttgtacaaatatcatttctctt 125090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 3154675 - 3154715
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||| ||| ||||||||||||||||||||||||||||    
T  3154675 caaaagttatcataaaatagttgtacaaatatcattactct 3154715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 14508193 - 14508229
Alignment:
Q  32 agttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||||||||||||||||| ||||    
T  14508193 agttgtcacaaaatagttgtacaaatatcatttctct 14508229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17574158 - 17574110
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||| |||||||||||  |||||||||||| |||||||||||||||||    
T  17574158 gttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactctt 17574110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 26685528 - 26685568
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  26685528 caaaagttgtcacaaaatggttgtacaaatattattactct 26685568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 26955259 - 26955299
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||||| ||||||||||||| ||||||||    
T  26955259 caaaagttgtcacaaaatggttgtacaaatattattactct 26955299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 29803263 - 29803223
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  29803263 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 29803223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 34428198 - 34428158
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  34428198 aaaagttgtcaaaaaatagttgtacaaatatcatttctctt 34428158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 36572729 - 36572689
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||||| ||||||||||||| |||||    
T  36572729 aaaagttgtcacaaaatagttatacaaatatcatttctctt 36572689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Complemental strand, 14716147 - 14716113
Alignment:
Q  33 gttgtcacaaaatagttgtacaaatatcattactc 67  Q
    |||||| ||||||||||||||||||||||||||||    
T  14716147 gttgtcccaaaatagttgtacaaatatcattactc 14716113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 29227754 - 29227720
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatta 64  Q
    |||||||||||||| ||||||||||||||||||||    
T  29227754 aaagttgtcacaaagtagttgtacaaatatcatta 29227720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 63
Target Start/End: Complemental strand, 42699095 - 42699061
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||||| |||||||||||||||||    
T  42699095 aaaagttgtcacaaaatggttgtacaaatatcatt 42699061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 72
Target Start/End: Original strand, 1774318 - 1774359
Alignment:
Q  31 aagttgtcacaaaatagttgtacaaatatcattactcttgtt 72  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||    
T  1774318 aagttgtcacaaagtagatgtacaaatatcatttctcttgtt 1774359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 16143427 - 16143394
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||| |||||||||||||||||    
T  16143427 aaagttgtcacaaaatggttgtacaaatatcatt 16143394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 19844341 - 19844382
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||| ||| ||||||||||||||||||||||| |||||    
T  19844341 caaaagttatcaaaaaatagttgtacaaatatcatttctctt 19844382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 25585384 - 25585343
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  25585384 ccaaaagttgtaacaaaatagttgttcaaatattattactct 25585343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 28811468 - 28811427
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||||||| | ||||||||||||||||| |||||    
T  28811468 caaaagttgtcacaaagtggttgtacaaatatcatttctctt 28811427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 32872930 - 32872971
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||||||| ||||||||||| |||||    
T  32872930 caaaagttgtcaaaaaatagttgttcaaatatcatttctctt 32872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Complemental strand, 35814504 - 35814452
Alignment:
Q  15 aagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||| ||||||||||| ||| ||||||||| ||||||||||||||||| ||||    
T  35814504 aagaaagttgtaccaaa-gttatcacaaaatggttgtacaaatatcatttctct 35814452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Complemental strand, 37821075 - 37821022
Alignment:
Q  21 gttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactcttgttaa 74  Q
    ||||| |||||||||||  |||||||||||| ||||||||| ||||||| ||||    
T  37821075 gttgtcccaaaagttgtaccaaaatagttgttcaaatatcactactcttattaa 37821022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 9240263 - 9240303
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    ||||||||||||| ||||| |||||||||||| ||||||||    
T  9240263 caaaagttgtcaccaaataattgtacaaatatgattactct 9240303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 9594517 - 9594477
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  9594517 caaaagttgtcacaaattggttgtacaaatatcatttctct 9594477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 9636191 - 9636231
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||| |||||| | |||||||||||||||||||||||    
T  9636191 aaaagttggcacaaagtggttgtacaaatatcattactctt 9636231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 12612966 - 12612906
Alignment:
Q  6 agagagaagaagaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattact 66  Q
    |||||||| || || ||||| |||||||||||  |||||| ||||| ||||||||||||||    
T  12612966 agagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattact 12612906  T

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Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 15953066 - 15953106
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||||||| ||| ||||||||||| |||||    
T  15953066 aaaagttgtcacaaaatagatgttcaaatatcatttctctt 15953106  T

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Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 18695357 - 18695317
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||| ||||||| ||||||||||||||||| ||||    
T  18695357 caaaagttgttacaaaatggttgtacaaatatcatttctct 18695317  T

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Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 69
Target Start/End: Complemental strand, 19526775 - 19526743
Alignment:
Q  37 tcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||| |||||||||||||||||||    
T  19526775 tcacaaaatagttatacaaatatcattactctt 19526743  T

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Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Complemental strand, 30640841 - 30640789
Alignment:
Q  16 agaatgttgtaccaaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||| |||||| |||||||||||||||||| | ||| ||||||||||| ||||    
T  30640841 agaaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctct 30640789  T

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Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Complemental strand, 38500981 - 38500941
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||| |||||||||||| ||||||||||||||||| |||||    
T  38500981 aaaaattgtcacaaaatggttgtacaaatatcatttctctt 38500941  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 39788737 - 39788773
Alignment:
Q  27 ccaaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  39788737 ccaaaagttgtcacataatggttgtacaaatatcatt 39788773  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Original strand, 42446323 - 42446363
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||| ||||||||||| ||||||||||| ||||    
T  42446323 caaaagttgtcaaaaaatagttgttcaaatatcatttctct 42446363  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 19724 - 19758
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||||||||||||||||||||||||||||    
T  19724 aaaagttgtcacaaaatagttgtacaaatatcatt 19758  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 34445 - 34412
Alignment:
Q  30 aaagttgtcacaaaatagttgtacaaatatcatt 63  Q
    |||||||||| |||||||||||||||||||||||    
T  34445 aaagttgtcaaaaaatagttgtacaaatatcatt 34412  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 69
Target Start/End: Original strand, 204477 - 204518
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  204477 caaaagttgtcagaaaatagatgtacaaatatcatttctctt 204518  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 219697 - 219737
Alignment:
Q  29 aaaagttgtcacaaaatagttgtacaaatatcattactctt 69  Q
    ||||||||||||||| | ||||||||||||||||| |||||    
T  219697 aaaagttgtcacaaagtggttgtacaaatatcatttctctt 219737  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 68
Target Start/End: Complemental strand, 337157 - 337117
Alignment:
Q  28 caaaagttgtcacaaaatagttgtacaaatatcattactct 68  Q
    |||||||||||| ||||| ||||||||||||||||| ||||    
T  337157 caaaagttgtcagaaaatggttgtacaaatatcatttctct 337117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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