View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10829A_high_1 (Length: 777)

Name: NF10829A_high_1
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10829A_high_1
NF10829A_high_1
[»] chr5 (32 HSPs)
chr5 (6-571)||(14705779-14706344)
chr5 (621-750)||(14706348-14706481)
chr5 (568-640)||(18704103-18704174)
chr5 (568-640)||(35135729-35135801)
chr5 (432-480)||(36796628-36796676)
chr5 (432-468)||(499652-499688)
chr5 (429-480)||(10771806-10771857)
chr5 (429-476)||(11615572-11615619)
chr5 (429-480)||(19177546-19177597)
chr5 (432-478)||(17369306-17369352)
chr5 (430-476)||(27153259-27153305)
chr5 (568-640)||(10907310-10907382)
chr5 (432-480)||(13508541-13508589)
chr5 (428-480)||(31723906-31723958)
chr5 (568-640)||(36539677-36539749)
chr5 (591-638)||(13224362-13224409)
chr5 (573-640)||(37063146-37063213)
chr5 (589-636)||(39128574-39128621)
chr5 (593-640)||(39919738-39919785)
chr5 (432-478)||(20982133-20982179)
chr5 (574-640)||(20982208-20982274)
chr5 (432-478)||(34198524-34198570)
chr5 (594-640)||(40048373-40048419)
chr5 (432-474)||(42034167-42034209)
chr5 (589-638)||(7096215-7096264)
chr5 (589-638)||(12595539-12595588)
chr5 (568-617)||(14295460-14295509)
chr5 (432-473)||(14331474-14331515)
chr5 (356-478)||(14714683-14714810)
chr5 (423-480)||(40335785-40335842)
chr5 (432-469)||(41419431-41419468)
chr5 (432-469)||(41534550-41534587)
[»] chr1 (34 HSPs)
chr1 (568-647)||(45999355-45999434)
chr1 (431-480)||(29793618-29793667)
chr1 (568-640)||(44928223-44928295)
chr1 (568-638)||(15360827-15360897)
chr1 (544-639)||(4200161-4200253)
chr1 (429-478)||(5157175-5157224)
chr1 (432-480)||(4757439-4757487)
chr1 (432-480)||(6292593-6292641)
chr1 (425-480)||(33723296-33723351)
chr1 (433-478)||(10199330-10199375)
chr1 (436-481)||(15515656-15515701)
chr1 (568-633)||(44936657-44936722)
chr1 (428-480)||(9602571-9602623)
chr1 (430-462)||(18403126-18403158)
chr1 (432-480)||(24460322-24460370)
chr1 (568-640)||(29793713-29793785)
chr1 (432-480)||(48748516-48748564)
chr1 (568-632)||(48830143-48830207)
chr1 (433-476)||(2522701-2522744)
chr1 (594-649)||(4768917-4768972)
chr1 (437-480)||(25944542-25944585)
chr1 (436-479)||(32958739-32958782)
chr1 (600-639)||(38651508-38651547)
chr1 (427-478)||(51929378-51929429)
chr1 (567-633)||(172644-172709)
chr1 (426-480)||(3597196-3597250)
chr1 (442-480)||(43420359-43420397)
chr1 (611-649)||(49928852-49928890)
chr1 (568-634)||(50998489-50998555)
chr1 (571-640)||(870976-871045)
chr1 (579-640)||(4202207-4202268)
chr1 (569-638)||(24146328-24146396)
chr1 (568-633)||(29007783-29007848)
chr1 (568-629)||(49517012-49517073)
[»] chr6 (20 HSPs)
chr6 (568-637)||(10452427-10452496)
chr6 (568-635)||(29274296-29274363)
chr6 (568-640)||(33068628-33068700)
chr6 (568-647)||(4006638-4006717)
chr6 (594-640)||(9559634-9559680)
chr6 (432-478)||(13908343-13908389)
chr6 (432-478)||(31776193-31776239)
chr6 (432-480)||(8420117-8420166)
chr6 (600-649)||(10836743-10836792)
chr6 (568-640)||(11340692-11340764)
chr6 (428-480)||(12111068-12111120)
chr6 (592-640)||(32917157-32917205)
chr6 (437-480)||(6742912-6742955)
chr6 (437-480)||(7351597-7351640)
chr6 (573-647)||(323735-323809)
chr6 (568-634)||(7785809-7785875)
chr6 (426-480)||(2732160-2732216)
chr6 (576-637)||(6014469-6014530)
chr6 (433-478)||(17241082-17241127)
chr6 (431-480)||(26559159-26559208)
[»] chr7 (20 HSPs)
chr7 (429-477)||(32730166-32730214)
chr7 (433-479)||(529464-529510)
chr7 (568-647)||(45813247-45813326)
chr7 (432-474)||(47046029-47046071)
chr7 (432-469)||(30812250-30812287)
chr7 (426-478)||(3836598-3836650)
chr7 (568-656)||(5276139-5276227)
chr7 (428-480)||(8427114-8427166)
chr7 (571-639)||(33894555-33894622)
chr7 (432-480)||(47041960-47042008)
chr7 (432-479)||(1418521-1418568)
chr7 (577-640)||(7244633-7244696)
chr7 (429-468)||(9210934-9210973)
chr7 (573-640)||(27492726-27492793)
chr7 (568-639)||(28165023-28165094)
chr7 (432-477)||(5276594-5276639)
chr7 (432-477)||(7513663-7513708)
chr7 (567-640)||(11208380-11208453)
chr7 (427-468)||(19302479-19302520)
chr7 (434-471)||(46946017-46946054)
[»] chr2 (33 HSPs)
chr2 (568-640)||(10143103-10143175)
chr2 (432-480)||(13866979-13867027)
chr2 (432-480)||(22878199-22878247)
chr2 (594-640)||(3611157-3611203)
chr2 (574-636)||(13630354-13630416)
chr2 (570-640)||(17952770-17952840)
chr2 (570-640)||(28803575-28803645)
chr2 (568-641)||(4550707-4550780)
chr2 (568-641)||(25609726-25609799)
chr2 (427-476)||(43985314-43985363)
chr2 (436-476)||(3458700-3458740)
chr2 (432-480)||(15370244-15370292)
chr2 (428-480)||(28803447-28803499)
chr2 (568-640)||(28902008-28902080)
chr2 (568-647)||(34764296-34764373)
chr2 (432-480)||(40759261-40759309)
chr2 (432-472)||(40837358-40837398)
chr2 (432-480)||(41170711-41170759)
chr2 (600-639)||(2416245-2416284)
chr2 (571-630)||(3458598-3458657)
chr2 (432-479)||(18525162-18525209)
chr2 (568-639)||(18962105-18962176)
chr2 (432-479)||(28810373-28810420)
chr2 (429-480)||(40158819-40158870)
chr2 (443-477)||(29430862-29430896)
chr2 (568-637)||(35539654-35539726)
chr2 (432-477)||(1830143-1830188)
chr2 (432-477)||(8017538-8017583)
chr2 (567-640)||(9478230-9478303)
chr2 (431-480)||(21616580-21616629)
chr2 (432-481)||(26372648-26372697)
chr2 (436-469)||(41516949-41516982)
chr2 (595-640)||(44589966-44590011)
[»] chr4 (25 HSPs)
chr4 (433-480)||(1017129-1017176)
chr4 (432-495)||(24193618-24193681)
chr4 (429-480)||(32420976-32421027)
chr4 (430-480)||(18628472-18628522)
chr4 (568-640)||(8130105-8130177)
chr4 (436-480)||(18512440-18512484)
chr4 (568-656)||(21593079-21593166)
chr4 (568-640)||(30207638-30207709)
chr4 (568-632)||(44119229-44119293)
chr4 (569-640)||(19422349-19422420)
chr4 (569-635)||(25487613-25487679)
chr4 (432-468)||(27043751-27043787)
chr4 (568-640)||(30024631-30024703)
chr4 (568-640)||(54325104-54325176)
chr4 (416-480)||(56186803-56186867)
chr4 (425-480)||(22845620-22845674)
chr4 (578-649)||(23815292-23815363)
chr4 (432-478)||(1075561-1075607)
chr4 (430-480)||(19305027-19305077)
chr4 (432-478)||(28259376-28259422)
chr4 (606-651)||(4663801-4663846)
chr4 (594-639)||(4798652-4798697)
chr4 (595-640)||(28623220-28623265)
chr4 (579-640)||(47970249-47970310)
chr4 (568-637)||(49219073-49219142)
[»] chr3 (26 HSPs)
chr3 (569-647)||(1395595-1395673)
chr3 (428-480)||(22667504-22667556)
chr3 (428-480)||(22724143-22724195)
chr3 (569-640)||(41028919-41028990)
chr3 (568-649)||(24235750-24235831)
chr3 (432-480)||(20210849-20210897)
chr3 (432-480)||(21872216-21872264)
chr3 (568-639)||(3182429-3182500)
chr3 (568-639)||(20192673-20192744)
chr3 (568-635)||(23785191-23785258)
chr3 (432-467)||(26990146-26990181)
chr3 (429-476)||(41848634-41848681)
chr3 (569-640)||(49586984-49587054)
chr3 (432-479)||(51929843-51929890)
chr3 (426-468)||(16072956-16072998)
chr3 (594-640)||(16790181-16790227)
chr3 (432-478)||(31512486-31512532)
chr3 (594-640)||(39971250-39971296)
chr3 (568-638)||(43116495-43116565)
chr3 (594-647)||(2128344-2128397)
chr3 (595-640)||(20173982-20174027)
chr3 (431-468)||(26911704-26911741)
chr3 (571-640)||(27792803-27792872)
chr3 (435-480)||(33965412-33965457)
chr3 (576-640)||(41159040-41159102)
chr3 (573-638)||(53736185-53736250)
[»] scaffold0590 (1 HSPs)
scaffold0590 (572-640)||(1145-1213)
[»] scaffold0275 (1 HSPs)
scaffold0275 (572-640)||(2762-2830)
[»] chr8 (28 HSPs)
chr8 (568-640)||(3945205-3945277)
chr8 (432-479)||(4560604-4560651)
chr8 (434-481)||(10560147-10560194)
chr8 (569-640)||(11494084-11494155)
chr8 (594-647)||(1929975-1930028)
chr8 (595-640)||(10114421-10114466)
chr8 (411-476)||(34290974-34291039)
chr8 (600-644)||(1561206-1561250)
chr8 (428-476)||(1821934-1821982)
chr8 (428-476)||(1856379-1856427)
chr8 (432-480)||(7714343-7714391)
chr8 (432-480)||(9700102-9700150)
chr8 (576-640)||(11188230-11188294)
chr8 (432-480)||(18331815-18331863)
chr8 (430-478)||(22705031-22705079)
chr8 (432-468)||(38602440-38602476)
chr8 (569-640)||(3645884-3645955)
chr8 (574-633)||(5071040-5071099)
chr8 (569-640)||(14280469-14280540)
chr8 (593-640)||(31916546-31916593)
chr8 (432-478)||(2606152-2606198)
chr8 (432-474)||(8060775-8060817)
chr8 (426-480)||(43368615-43368669)
chr8 (431-480)||(1561378-1561427)
chr8 (435-480)||(6950423-6950468)
chr8 (602-639)||(13652147-13652184)
chr8 (602-639)||(13710790-13710827)
chr8 (573-638)||(29056063-29056128)
[»] scaffold0024 (1 HSPs)
scaffold0024 (568-639)||(27508-27579)
[»] scaffold0549 (2 HSPs)
scaffold0549 (568-640)||(1791-1863)
scaffold0549 (568-640)||(3881-3953)
[»] scaffold0020 (1 HSPs)
scaffold0020 (432-478)||(159894-159940)


Alignment Details
Target: chr5 (Bit Score: 534; Significance: 0; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 534; E-Value: 0
Query Start/End: Original strand, 6 - 571
Target Start/End: Original strand, 14705779 - 14706344
Alignment:
Q  6 aaagaatccagtgcatctctgcaatccatccacctcattacgttgtactacagtgtcataaactttaaactaaaatttgccatgagataaacactgaaat 105  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  14705779 aaagaatccagtgcatctctgcaatccatccacctcattactttgtactacagtgttataaactttaaactaaaatttgccatgagataaacactgaaat 14705878  T
Q  106 gctgttgagaaatctagtatatacacgactatatcattattatatataatcacttcttaaaaagttaagctaaaagcaaacaaattcataaattatgatc 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  14705879 gctgttgagaaatctagtatatacacgactatatcattattatatataatcacttcttaaaaagttaagccaaaagcaaacaaattcataaattatgatc 14705978  T
Q  206 attgtttaatcttaaaactgcttcaagttaccgtgctcatccacaacatatagtcatatactacacaaaagtgcaattttaaggaaaacatcaacattca 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14705979 attgtttaatcttaaaactgcttcaagttaccgtgctcatccacaacatatagtcatatactacacaaaagtgcaattttaaggaaaacatcaacattga 14706078  T
Q  306 aacaaatataatcatgctactacaagaagaaattggatacaaaattatggtcatagccaaagcattccggagaccaattactacaaaataatggcaccca 405  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706079 aacaaatataatcatgctactacaagacgaaattgaatacaaaattatggtcatagccaaagcattccggagaccaattactacaaaataatggcaccca 14706178  T
Q  406 aaacaaattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttggagagttgtat 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  14706179 aaacaaattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgagatgtgaaactatttgaagagttgtat 14706278  T
Q  506 aagctcttttcaacttaattatctccataaactcatagggataacttacgaaaacagtataatata 571  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14706279 aagctcttttcaacttaattatctccataaactcatagggataacttacgaaaacagtataatata 14706344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 621 - 750
Target Start/End: Original strand, 14706348 - 14706481
Alignment:
Q  621 acttatacataagcacttatgctataaacgcctaataattaagctgtttaacgaaatagggcctaacagaaaccacnnnnnnngtttcca----agcagc 716  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||       |||    
T  14706348 acttatacataagcacttatgctataaacgcctaataattaagttgtttaacgaaatagggcctaacagaaaccacaaaaaaagtttccactttccaagc 14706447  T
Q  717 agcaagaaaaggctattgacaagaatgataaaca 750  Q
    ||||||||||||||||||| ||||||||||||||    
T  14706448 agcaagaaaaggctattgagaagaatgataaaca 14706481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 18704103 - 18704174
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||| |||| ||||||| ||||| |||||||||| ||||||| ||||||||||||||| ||||||    
T  18704103 tatagcttatataaaaatagcttgactttat-ttatcttttgttatagaaataacttatacataagaacttat 18704174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 35135729 - 35135801
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| || |||| ||||| |||||||||| ||||||| || ||||||||||| |||||||    
T  35135729 tatagcttatatgaaaatagtttgactttattttatcttttgttatagaaatatcttatacataaacacttat 35135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 36796628 - 36796676
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  36796628 tttggattgacttatttgagcttatctaatgacataaacacttgtgaga 36796676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 468
Target Start/End: Original strand, 499652 - 499688
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataa 468  Q
    |||||||||||||||||||||||||||||||||||||    
T  499652 tttggattgacttatttgagcttacctactgacataa 499688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 429 - 480
Target Start/End: Original strand, 10771806 - 10771857
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||| |||||||||||||| |||||| ||||| |||||||||||    
T  10771806 ctatttggattggcttatttgagcttatctactggcataagcacttgtgaga 10771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 429 - 476
Target Start/End: Original strand, 11615572 - 11615619
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||    
T  11615572 ctatttggattggcttatttgagcttatctactaacataaacacttgt 11615619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 429 - 480
Target Start/End: Complemental strand, 19177597 - 19177546
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||||||| ||||||| || ||| |||||||||||||    
T  19177597 ctatttggattgacttatttgagtttacctattggcatgaacacttgtgaga 19177546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 17369352 - 17369306
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||||    
T  17369352 tttggattgacttatttgaacttatctactgacataatcacttgtga 17369306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 430 - 476
Target Start/End: Original strand, 27153259 - 27153305
Alignment:
Q  430 tatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    ||||||||||||||| ||||||||||||||||| || ||||||||||    
T  27153259 tatttggattgacttctttgagcttacctactggcaaaaacacttgt 27153305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 10907382 - 10907310
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||| ||||||||||  || |||||||||| ||| | || ||||||||| |||||||||||||| |||||||    
T  10907382 tatagattatatgaaagtagtttgattttattttaccattagctatagaaataacttatacataaacacttat 10907310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 13508589 - 13508541
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||| ||||||||||||| |||| |||||| |||||||||||||||||    
T  13508589 tttggcttgacttatttgaacttatctactggcataaacacttgtgaga 13508541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 31723958 - 31723906
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||| |||||    
T  31723958 cctatttggattgacttatttgagcttatgtactagcataaacacttatgaga 31723906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 36539749 - 36539677
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| || |||| ||||| |||||||||| || | || || |||| ||||||||||||||    
T  36539749 tatagcttatatgaaaacaggttgactttattttatcttttgataaacaaatagcttacacataagcacttat 36539677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 591 - 638
Target Start/End: Complemental strand, 13224409 - 13224362
Alignment:
Q  591 gattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    |||||||| |||||||||| ||||||| || |||||||||||||||||    
T  13224409 gattttattttatcttttgttatagaaatagcttatacataagcactt 13224362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 640
Target Start/End: Original strand, 37063146 - 37063213
Alignment:
Q  573 cttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||| || |||| ||||| |||||||||| ||||||| ||  ||||||||||||| ||||    
T  37063146 cttatatgaaaatagtttgactttattttatcttttgttatagaaatagtttatacataagcatttat 37063213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 636
Target Start/End: Complemental strand, 39128621 - 39128574
Alignment:
Q  589 ttgattttatgttatcttttgctatagaattaacttatacataagcac 636  Q
    |||| ||||| |||||||||| |||||||||| |||||||||||||||    
T  39128621 ttgactttattttatcttttgttatagaattagcttatacataagcac 39128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 640
Target Start/End: Original strand, 39919738 - 39919785
Alignment:
Q  593 ttttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| | |||||||| |||||||||| |||||||||||||||||||    
T  39919738 ttttatttaatcttttgttatagaattagcttatacataagcacttat 39919785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Original strand, 20982133 - 20982179
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||||| |||||||||||||| |||||| | |||||||||||||    
T  20982133 tttggattggcttatttgagcttatctactgtcgtaaacacttgtga 20982179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 574 - 640
Target Start/End: Original strand, 20982208 - 20982274
Alignment:
Q  574 ttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||  | |||| ||||| ||||| |||| ||||||| || |||||||||||||||||||    
T  20982208 ttatatgaaaacgggttgactttattttatcctttgttatagaaatagcttatacataagcacttat 20982274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 34198570 - 34198524
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||||||||||||||||||| |||  |||| ||||||||||||||||    
T  34198570 tttggattgacttatttgagtttatttactaacataaacacttgtga 34198524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 40048373 - 40048419
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||| |||||||||| |||||||  |||||||||||||||||||||    
T  40048373 tttattttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 474
Target Start/End: Complemental strand, 42034209 - 42034167
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacactt 474  Q
    ||||||||  ||||||||||||||||||||||||||| |||||    
T  42034209 tttggattagcttatttgagcttacctactgacataagcactt 42034167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 638
Target Start/End: Original strand, 7096215 - 7096264
Alignment:
Q  589 ttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    |||| ||||| |||||||||| ||||||| || |||||||||||||||||    
T  7096215 ttgactttattttatcttttgttatagaaatagcttatacataagcactt 7096264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 638
Target Start/End: Original strand, 12595539 - 12595588
Alignment:
Q  589 ttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    |||| ||||| |||||||||||||||||| || |||||||| ||||||||    
T  12595539 ttgaatttattttatcttttgctatagaaatagcttatacacaagcactt 12595588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 617
Target Start/End: Complemental strand, 14295509 - 14295460
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaa 617  Q
    ||||||||||||||||| || |||| ||||| |||||||||| |||||||    
T  14295509 tatagcttatatgaaaacagtttgactttattttatcttttgttatagaa 14295460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 473
Target Start/End: Complemental strand, 14331515 - 14331474
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacact 473  Q
    |||||||||||||||||||||||| |||||| ||||| ||||    
T  14331515 tttggattgacttatttgagcttatctactgtcataagcact 14331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 356 - 478
Target Start/End: Original strand, 14714683 - 14714810
Alignment:
Q  356 tcatagccaaagcattccggagaccaatt-actacaaaataatggcacccaaaacaaa---ttgtgaaactaaagacc-tatttggattgacttatttga 450  Q
    |||||||||||| || ||||| || |||| | || |||||||||||||| |||| |||   ||||||||||||||  | | |||| |||| || ||||||    
T  14714683 tcatagccaaagtatgccggaaacaaatttagtaaaaaataatggcaccaaaaaaaaaaagttgtgaaactaaagggcatgtttgaattggctcatttga 14714782  T
Q  451 gcttacctactgacataaacacttgtga 478  Q
    ||||| | |||||||||| |||||||||    
T  14714783 gcttatccactgacataagcacttgtga 14714810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 40335785 - 40335842
Alignment:
Q  423 aaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||| ||| |||||||||||||||||||| ||| |||||  || ||||||||||||||    
T  40335785 aaaggcctgtttggattgacttatttgagtttatctactcgcacaaacacttgtgaga 40335842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 469
Target Start/End: Complemental strand, 41419468 - 41419431
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaa 469  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41419468 tttggattgacttatttgagctaatctactgacataaa 41419431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 469
Target Start/End: Complemental strand, 41534587 - 41534550
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaa 469  Q
    |||||||||||||||||||||| | |||||||||||||    
T  41534587 tttggattgacttatttgagctaatctactgacataaa 41534550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 45999355 - 45999434
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    ||||||||||||||||  || |||| ||||| |||||||||| ||||||| || ||||||||| ||||||||||||||||    
T  45999355 tatagcttatatgaaagcagtttgactttatcttatcttttgttatagaaatagcttatacatgagcacttatgctataa 45999434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 29793618 - 29793667
Alignment:
Q  431 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  29793618 atttgtattgacttatttgagcttatctactgacataaacacttgtgaga 29793667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 44928223 - 44928295
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| ||||||| ||||| ||||||||||| |  ||| || |||||||||||||||||||    
T  44928223 tatagcttatatgaaaacagcttgactttatcttatcttttgcaactgaaatagcttatacataagcacttat 44928295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 568 - 638
Target Start/End: Complemental strand, 15360897 - 15360827
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    ||||||||||||||||| || |||| ||||| |||||||||| ||||||| ||||| |||||||| |||||    
T  15360897 tatagcttatatgaaaacagtttgactttattttatcttttgttatagaaataactaatacataaacactt 15360827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 544 - 639
Target Start/End: Complemental strand, 4200253 - 4200161
Alignment:
Q  544 ggataacttacgaaaacagtataatatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    ||||| |||||||||||| ||||   ||||||||||||||| | ||||| ||||| |||||||||| |||| || ||||||||| |||| ||||||    
T  4200253 ggatatcttacgaaaacaatata---tagcttatatgaaaacaacttgactttattttatcttttgttataaaaataacttatatataaacactta 4200161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 429 - 478
Target Start/End: Complemental strand, 5157224 - 5157175
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  5157224 ctatttggattgacttatttgaacttatctacggacataaacacttgtga 5157175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 4757487 - 4757439
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  4757487 tttggtttgacttatttgagcttatctattgacataaacacttgtgaga 4757439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 6292641 - 6292593
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||| |||||||||||| ||||| |||||    
T  6292641 tttggattgacttatttgagcttatctactgacataagcacttttgaga 6292593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 33723296 - 33723351
Alignment:
Q  425 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||| ||||||||||||||||||| |||| |||||  |||||||||||||||||    
T  33723296 agacctgtttggattgacttatttgaacttatctactaccataaacacttgtgaga 33723351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 433 - 478
Target Start/End: Original strand, 10199330 - 10199375
Alignment:
Q  433 ttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtga 10199375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 15515701 - 15515656
Alignment:
Q  436 gattgacttatttgagcttacctactgacataaacacttgtgagaa 481  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||    
T  15515701 gattgacttatttgagcttatctactggcataaacacgtgtgagaa 15515656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 633
Target Start/End: Original strand, 44936657 - 44936722
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataag 633  Q
    ||||||||||||||||| || |||| ||||| |||||||||| ||||||| |||||| ||| ||||    
T  44936657 tatagcttatatgaaaatagtttgactttatcttatcttttgttatagaaataacttctacttaag 44936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 9602571 - 9602623
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||| |||||||| ||||| || ||| |||||||||||    
T  9602571 cctatttggattgacttatctgagcttatctactaacttaagcacttgtgaga 9602623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 430 - 462
Target Start/End: Original strand, 18403126 - 18403158
Alignment:
Q  430 tatttggattgacttatttgagcttacctactg 462  Q
    |||||||||||||||||||||||||||||||||    
T  18403126 tatttggattgacttatttgagcttacctactg 18403158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 24460322 - 24460370
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||| |||| |||||||||| | |||||||||||    
T  24460322 tttggattgacttatttgaacttatctactgacatgagcacttgtgaga 24460370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 29793785 - 29793713
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||| ||||| | ||| | |||||||||||||||| | ||||| || ||| |||||||||||||||    
T  29793785 tatagcttatacgaaaacaacttaactttatgttatcttttgttgtagaaatagcttgtacataagcacttat 29793713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 48748516 - 48748564
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||| ||||||||||||||||||| | | ||||||||||||||||||||    
T  48748516 tttgaattgacttatttgagcttatccattgacataaacacttgtgaga 48748564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 632
Target Start/End: Original strand, 48830143 - 48830207
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataa 632  Q
    ||||||||||||||||| || |||| ||||| |||||||| |  |||||| ||||||||||||||    
T  48830143 tatagcttatatgaaaatagtttgactttattttatctttggtaatagaaataacttatacataa 48830207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 476
Target Start/End: Complemental strand, 2522744 - 2522701
Alignment:
Q  433 ttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||    
T  2522744 ttggattgacttatttgagtttatctactggcataaacacttgt 2522701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 594 - 649
Target Start/End: Original strand, 4768917 - 4768972
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttatgctataaac 649  Q
    ||||| |||||||||| ||||| | || ||||||||||||||||| ||||||||||    
T  4768917 tttattttatcttttggtatagcaatagcttatacataagcacttttgctataaac 4768972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 480
Target Start/End: Complemental strand, 25944585 - 25944542
Alignment:
Q  437 attgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||| |||||  |||||||||||||||||||||||    
T  25944585 attgacttatttgcgcttatttactgacataaacacttgtgaga 25944542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 436 - 479
Target Start/End: Complemental strand, 32958782 - 32958739
Alignment:
Q  436 gattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    |||||||||||||||||||| |||||| ||||| ||||||||||    
T  32958782 gattgacttatttgagcttatctactgtcataagcacttgtgag 32958739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 639
Target Start/End: Original strand, 38651508 - 38651547
Alignment:
Q  600 ttatcttttgctatagaattaacttatacataagcactta 639  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  38651508 ttatcttttgttatagaattagcttatacataagcactta 38651547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 427 - 478
Target Start/End: Original strand, 51929378 - 51929429
Alignment:
Q  427 acctatttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||| ||||||||||||| |||||||||| |||||||||||| ||| |||||    
T  51929378 acctctttggattgacttttttgagcttatctactgacataagcacctgtga 51929429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 567 - 633
Target Start/End: Original strand, 172644 - 172709
Alignment:
Q  567 atatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataag 633  Q
    ||||||| |||| ||||||| ||| | |||||||||||||||| ||||||| || ||||||||||||    
T  172644 atatagcctataagaaaaaa-cttaactttatgttatcttttgttatagaaatagcttatacataag 172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 3597196 - 3597250
Alignment:
Q  426 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||| |||||||||||||||||||| ||| ||| ||| |||| |||||||||||    
T  3597196 gacctgtttggattgacttatttgaggttatctaatgatataaccacttgtgaga 3597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 43420397 - 43420359
Alignment:
Q  442 cttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  43420397 cttatttgagcttatctacagacataaacacttgtgaga 43420359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 611 - 649
Target Start/End: Complemental strand, 49928890 - 49928852
Alignment:
Q  611 tatagaattaacttatacataagcacttatgctataaac 649  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  49928890 tatagaaataacttatacaaaagcacttatgctataaac 49928852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 634
Target Start/End: Complemental strand, 50998555 - 50998489
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagc 634  Q
    ||||||||||||||||  || |||||||| | |||||||||| || |||| || |||||||||||||    
T  50998555 tatagcttatatgaaagtagtttgattttgttttatcttttgttacagaaatagcttatacataagc 50998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 640
Target Start/End: Complemental strand, 871045 - 870976
Alignment:
Q  571 agcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||  |||| || || |||||||||| |||| || ||  ||||||||||||||||||    
T  871045 agcttatatgaaaaaaaattgacttaattttatcttttgttataaaaatagtttatacataagcacttat 870976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 640
Target Start/End: Original strand, 4202207 - 4202268
Alignment:
Q  579 tgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| ||||||| |||   |||||||||| ||||||| |||||||||| |||||||||||    
T  4202207 tgaaaacagcttgactttggtttatcttttgttatagaaataacttatacttaagcacttat 4202268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 569 - 638
Target Start/End: Original strand, 24146328 - 24146396
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    ||||| |||||||||| || ||||||| || | | |||||| ||||||| ||||||||||||||||||||    
T  24146328 atagcgtatatgaaaatagtttgatttcatttga-cttttgttatagaaataacttatacataagcactt 24146396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 633
Target Start/End: Original strand, 29007783 - 29007848
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataag 633  Q
    ||||||||||||||||| || |||| ||||  || ||||||| ||||||| ||||||| |||||||    
T  29007783 tatagcttatatgaaaatagtttgactttaatttttcttttgttatagaaataacttagacataag 29007848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 629
Target Start/End: Complemental strand, 49517073 - 49517012
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttataca 629  Q
    ||||||||| ||||||| |  |||| ||||| |||||||||| ||||||| |||||||||||    
T  49517073 tatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaataacttataca 49517012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 568 - 637
Target Start/End: Original strand, 10452427 - 10452496
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcact 637  Q
    ||||||||||||||||| || |||||||||| |||| ||||| ||||||| || ||||||||||||||||    
T  10452427 tatagcttatatgaaaatagtttgattttattttatattttgttatagaaatagcttatacataagcact 10452496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 568 - 635
Target Start/End: Original strand, 29274296 - 29274363
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagca 635  Q
    ||||||||||||||||| |  |||| ||||| |||||||||||||||||| || ||||||||||||||    
T  29274296 tatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataagca 29274363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 33068628 - 33068700
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| ||||| |||||| || ||||| |||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  33068628 tatatcttatttgaaaacagtttgatattattttatcttttgttatagaaataacttatacataagcatttat 33068700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 4006717 - 4006638
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    |||||||||||| |||| |  |||| ||||| ||||| |||| ||||||| || ||||| ||||||||||||||||||||    
T  4006717 tatagcttatataaaaacaatttgactttattttatcatttgttatagaaatatcttatgcataagcacttatgctataa 4006638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 9559634 - 9559680
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||| |||||||||||||||||| |||||||||||||||| |||||    
T  9559634 tttattttatcttttgctatagaaataacttatacataagcgcttat 9559680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 13908389 - 13908343
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||| |||||||||||||| |||| ||||||||||||||||||||||    
T  13908389 tttgaattgacttatttgaacttatctactgacataaacacttgtga 13908343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 478
Target Start/End: Original strand, 31776193 - 31776239
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  31776193 tttggattgacttatttgagcttatctactgatatatacacttgtga 31776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 8420117 - 8420166
Alignment:
Q  432 tttggattgactt-atttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||| ||||||||||| ||| ||||||||||||||||||||    
T  8420117 tttggattgactttatttgagcttatctattgacataaacacttgtgaga 8420166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 649
Target Start/End: Complemental strand, 10836792 - 10836743
Alignment:
Q  600 ttatcttttgctatagaattaacttatacataagcacttatgctataaac 649  Q
    |||||||||| ||||||  |||||||||||||||| ||||||||||||||    
T  10836792 ttatcttttgttatagatataacttatacataagcgcttatgctataaac 10836743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 11340692 - 11340764
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| |||||||||| |  || | ||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  11340692 tatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 11340764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 12111120 - 12111068
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||||||| |||||  ||||| |||||| ||||    
T  12111120 cctatttggattgacttatttgagcttatctactagcataagcacttgcgaga 12111068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 592 - 640
Target Start/End: Complemental strand, 32917205 - 32917157
Alignment:
Q  592 attttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||| |||||||||||||| ||| || |||||||||||||||||||    
T  32917205 attttattttatcttttgctattgaaatagcttatacataagcacttat 32917157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 480
Target Start/End: Complemental strand, 6742955 - 6742912
Alignment:
Q  437 attgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||||  ||||| |||||||||||    
T  6742955 attgacttatttgagcttacctactagcataatcacttgtgaga 6742912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 437 - 480
Target Start/End: Original strand, 7351597 - 7351640
Alignment:
Q  437 attgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||    
T  7351597 attgacttatttgagtttatctactgacataagcacttgtgaga 7351640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 573 - 647
Target Start/End: Complemental strand, 323809 - 323735
Alignment:
Q  573 cttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    |||||||||||| || |||| ||||| |||||||||  ||||||| || |||||||| || |||||||| |||||    
T  323809 cttatatgaaaacagtttgaatttattttatcttttaatatagaaatagcttatacaaaaccacttatgttataa 323735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 634
Target Start/End: Original strand, 7785809 - 7785875
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagc 634  Q
    ||||||||||||||||| || |||| ||||| |||||||||| |||| || ||||||| || |||||    
T  7785809 tatagcttatatgaaaagagtttgactttattttatcttttggtatataagtaacttacacgtaagc 7785875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 2732160 - 2732216
Alignment:
Q  426 gacctatttggattgacttattt--gagcttacctactgacataaacacttgtgaga 480  Q
    |||||||| ||||||||||||||  ||||||  |||||||||||| |||||||||||    
T  2732160 gacctattgggattgacttatttgagagcttgtctactgacataagcacttgtgaga 2732216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 637
Target Start/End: Complemental strand, 6014530 - 6014469
Alignment:
Q  576 atatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcact 637  Q
    |||||| || || |||| |||||||||||||||| | |||||||| || |||||||||||||    
T  6014530 atatgagaataggttgactttatgttatcttttgttgtagaattagctaatacataagcact 6014469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 433 - 478
Target Start/End: Original strand, 17241082 - 17241127
Alignment:
Q  433 ttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||| ||||||||||| |||  |||||||||||||||||||||    
T  17241082 ttggatttacttatttgagtttatatactgacataaacacttgtga 17241127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 26559159 - 26559208
Alignment:
Q  431 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||| ||||||||||| |||||||||| ||||| || ||||||||    
T  26559159 atttggattaacttatttgagtttacctactggcataagcatttgtgaga 26559208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 32730166 - 32730214
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgtg 477  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||    
T  32730166 ctatttcgattgacttatttgagcttacctactgacataaacatttgtg 32730214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 479
Target Start/End: Complemental strand, 529510 - 529464
Alignment:
Q  433 ttggattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||    
T  529510 ttggattgacttatttgagcttatctactggcataaacacttgtgag 529464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 45813247 - 45813326
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    ||||| ||||||||||| |  |||| ||||| |||||||||| ||||||| || |||||| |||||||| ||||||||||    
T  45813247 tatagattatatgaaaacaagttgactttattttatcttttggtatagaaatagcttataaataagcacctatgctataa 45813326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 432 - 474
Target Start/End: Original strand, 47046029 - 47046071
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacactt 474  Q
    |||||||||||||||||| ||||| ||||||||||||||||||    
T  47046029 tttggattgacttatttgtgcttatctactgacataaacactt 47046071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 432 - 469
Target Start/End: Complemental strand, 30812287 - 30812250
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaa 469  Q
    |||||||||||||||||||| |||||||||||||||||    
T  30812287 tttggattgacttatttgagtttacctactgacataaa 30812250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 426 - 478
Target Start/End: Original strand, 3836598 - 3836650
Alignment:
Q  426 gacctatttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||||||||||| |||||||||||||| |||||| | ||| |||||||||    
T  3836598 gacctatttggattgccttatttgagcttatctactggcttaagcacttgtga 3836650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 656
Target Start/End: Complemental strand, 5276227 - 5276139
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataaacgcctaat 656  Q
    |||||||| | ||||||  | |||| |||||||||||||||| |||| || || ||||||||||||||||||  | |||||||| ||||    
T  5276227 tatagcttttgtgaaaacggtttgactttatgttatcttttgttataaaaatagcttatacataagcacttaaacgataaacgcttaat 5276139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 8427166 - 8427114
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||| ||||||||||||| ||||| ||||||  ||||||||||    
T  8427166 cctatttggattgatttatttgagcttatctactaacataagtacttgtgaga 8427114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 571 - 639
Target Start/End: Complemental strand, 33894622 - 33894555
Alignment:
Q  571 agcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    |||||||||||||| || |||| || || |||||||||| ||||||| || ||||||||||||||||||    
T  33894622 agcttatatgaaaacagtttgactt-attttatcttttgttatagaaatagcttatacataagcactta 33894555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 47041960 - 47042008
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||||| || ||| |||||| |||||||||||||    
T  47041960 tttggattgacttatttgagcatatctattgacattaacacttgtgaga 47042008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 479
Target Start/End: Complemental strand, 1418568 - 1418521
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  1418568 tttggattgacttatttgagcttatctactggcataagcacttatgag 1418521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 577 - 640
Target Start/End: Complemental strand, 7244696 - 7244633
Alignment:
Q  577 tatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||| || |||| ||| | |||||||||| ||||||| || |||||||||||||||||||    
T  7244696 tatgaaaacagtttgactttcttttatcttttgatatagaaatagcttatacataagcacttat 7244633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 468
Target Start/End: Complemental strand, 9210973 - 9210934
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataa 468  Q
    ||||||||||||||||||||||||||| ||||||| ||||    
T  9210973 ctatttggattgacttatttgagcttatctactgatataa 9210934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 573 - 640
Target Start/End: Complemental strand, 27492793 - 27492726
Alignment:
Q  573 cttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||| |||||||||| | | |||||| ||||||| ||  ||||||||||| ||||||    
T  27492793 cttatatgaaaaaagtttgattttatttgaacttttgttatagaaatagtttatacataagaacttat 27492726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 639
Target Start/End: Complemental strand, 28165094 - 28165023
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    |||||||||||| |||| |  |||| || || |||||||||| |||||||  ||||||||||||||||||||    
T  28165094 tatagcttatattaaaacaatttgacttcattttatcttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 5276639 - 5276594
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtg 477  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||    
T  5276639 tttggattgacttagatgagcttatctactaacataaacacttgtg 5276594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 7513708 - 7513663
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtg 477  Q
    |||| ||||||||||||||||||| |||||| ||||| ||||||||    
T  7513708 tttgaattgacttatttgagcttatctactggcataagcacttgtg 7513663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 640
Target Start/End: Complemental strand, 11208453 - 11208380
Alignment:
Q  567 atatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| |||||||||||  | |||| ||||| |||||||||| | |||||||| |||||| |||||| |||||    
T  11208453 atatagtttatatgaaaacggtttgagtttattttatcttttgttgtagaattatcttatatataagcgcttat 11208380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 468
Target Start/End: Original strand, 19302479 - 19302520
Alignment:
Q  427 acctatttggattgacttatttgagcttacctactgacataa 468  Q
    |||| |||| ||||||||||||||||||| ||||||||||||    
T  19302479 acctgtttgaattgacttatttgagcttatctactgacataa 19302520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 434 - 471
Target Start/End: Complemental strand, 46946054 - 46946017
Alignment:
Q  434 tggattgacttatttgagcttacctactgacataaaca 471  Q
    |||||||||||||||||||||| |||||| ||||||||    
T  46946054 tggattgacttatttgagcttagctactggcataaaca 46946017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 10143175 - 10143103
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||| |||| || |||| || || |||||||||| ||||||| ||||||||||||||||||||||    
T  10143175 tatagcttatataaaaacagtttgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 13867027 - 13866979
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||    
T  13867027 tttggattgacctatttgagcttatctactgccataaacacttgtgaga 13866979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 22878247 - 22878199
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||| | |||||||||| |||||||||||    
T  22878247 tttggattgacttatttgagcttatccactgacataagcacttgtgaga 22878199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 640
Target Start/End: Complemental strand, 3611203 - 3611157
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||||    
T  3611203 tttattttaccttttgctatagaaataacttatacataagcacttat 3611157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 574 - 636
Target Start/End: Original strand, 13630354 - 13630416
Alignment:
Q  574 ttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcac 636  Q
    ||||||||||| || |||| ||||| |||||||||| || |||| ||||||||||||||||||    
T  13630354 ttatatgaaaacagtttgactttatcttatcttttgatagagaaataacttatacataagcac 13630416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 640
Target Start/End: Original strand, 17952770 - 17952840
Alignment:
Q  570 tagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||| || |||| ||||| |||||||||| ||||||| || |||||| |||||| |||||    
T  17952770 tagcttatatgaaaatagtttgactttattttatcttttgttatagaaatagcttatatataagctcttat 17952840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 570 - 640
Target Start/End: Original strand, 28803575 - 28803645
Alignment:
Q  570 tagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||  || |||| ||||| |||||||||| ||| ||| ||||||||| ||||||||||||    
T  28803575 tagcttatatgaaatcagtttgactttattttatcttttgttatcgaaataacttatatataagcacttat 28803645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 641
Target Start/End: Complemental strand, 4550780 - 4550707
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatg 641  Q
    ||||| ||||||||||| |||||||  |||| |||||||||  ||| |||  ||||||||||||||||||||||    
T  4550780 tatagtttatatgaaaacagcttgacgttattttatcttttattatggaaacaacttatacataagcacttatg 4550707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 641
Target Start/End: Complemental strand, 25609799 - 25609726
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatg 641  Q
    ||||||||||| ||||| |  |||| ||||| |||||||||  ||||||| || ||||||||||||||||||||    
T  25609799 tatagcttatacgaaaataaattgactttattttatcttttcttatagaaatagcttatacataagcacttatg 25609726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 476
Target Start/End: Complemental strand, 43985363 - 43985314
Alignment:
Q  427 acctatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    |||||||||||| ||||||||| || ||| ||||||||||||||||||||    
T  43985363 acctatttggatcgacttatttaagtttatctactgacataaacacttgt 43985314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 436 - 476
Target Start/End: Complemental strand, 3458740 - 3458700
Alignment:
Q  436 gattgacttatttgagcttacctactgacataaacacttgt 476  Q
    ||||||||||||||||||||| ||||| |||||||||||||    
T  3458740 gattgacttatttgagcttacttactggcataaacacttgt 3458700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 15370244 - 15370292
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||| |||||| ||||| || ||||||||    
T  15370244 tttggattgacttatttgagcttatctactggcataagcatttgtgaga 15370292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 28803447 - 28803499
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||||||| |||| | ||||| ||| |||||||    
T  28803447 cctatttggattgacttatttgagcttatctaccggcataagcacatgtgaga 28803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 28902080 - 28902008
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| || || ||||||| ||| ||| || |||| || || |||||||||||||||||||    
T  28902080 tatagcttatatgaaaacagtttaattttattttaacttatgttataaaaatagcttatacataagcacttat 28902008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 34764373 - 34764296
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    ||||||||||||  |||||| |||||||||| |||||||||   || ||| || ||||||||||||||| ||||||||||    
T  34764373 tatagcttatat--aaaaagtttgattttattttatcttttttcattgaaatagcttatacataagcacgtatgctataa 34764296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 40759309 - 40759261
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||| |||||||||||||| ||| |||||||| |||||||||||    
T  40759309 tttggattgccttatttgagcttatctattgacataagcacttgtgaga 40759261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 472
Target Start/End: Original strand, 40837358 - 40837398
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacac 472  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  40837358 tttggattggcttatttgagcttatctactgacataaacac 40837398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 41170759 - 41170711
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||| |||||||||| ||| ||||| ||||||||||||||||||    
T  41170759 tttggattggcttatttgagtttatctactaacataaacacttgtgaga 41170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 639
Target Start/End: Complemental strand, 2416284 - 2416245
Alignment:
Q  600 ttatcttttgctatagaattaacttatacataagcactta 639  Q
    ||||||||||||| |||| |||||||||||||||||||||    
T  2416284 ttatcttttgctacagaaataacttatacataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 630
Target Start/End: Complemental strand, 3458657 - 3458598
Alignment:
Q  571 agcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacat 630  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||| || ||||||| ||||    
T  3458657 agcttatatgaaaaaagtttgactttattttatcttttgttataaaaataacttagacat 3458598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 479
Target Start/End: Original strand, 18525162 - 18525209
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    |||| ||||||||||||||||||| |||| |||||||||||| |||||    
T  18525162 tttgaattgacttatttgagcttatctacagacataaacactcgtgag 18525209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 639
Target Start/End: Original strand, 18962105 - 18962176
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    ||||||||||||||||| || || | ||||| |||||||||| |||| || || || |||||||||||||||    
T  18962105 tatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataagcactta 18962176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 479
Target Start/End: Original strand, 28810373 - 28810420
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    |||||||||||||||||||||||  ||| || ||||||||||||||||    
T  28810373 tttggattgacttatttgagcttctctattggcataaacacttgtgag 28810420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 480
Target Start/End: Complemental strand, 40158870 - 40158819
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||| ||||||||||| || ||||||||||||  ||||||||||    
T  40158870 ctatttggattggcttatttgagcatatctactgacataagaacttgtgaga 40158819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 443 - 477
Target Start/End: Complemental strand, 29430896 - 29430862
Alignment:
Q  443 ttatttgagcttacctactgacataaacacttgtg 477  Q
    ||||||||||||| |||||||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtg 29430862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 637
Target Start/End: Complemental strand, 35539726 - 35539654
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttt---tgctatagaattaacttatacataagcact 637  Q
    |||| |||||||||||| || |||||||||| ||||||||   |||||| ||| ||| |||||||||||||||    
T  35539726 tataacttatatgaaaatagtttgattttattttatcttttcctgctatcgaaataatttatacataagcact 35539654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 1830188 - 1830143
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtg 477  Q
    |||||||||||||||||||| |||  ||||||||||| ||||||||    
T  1830188 tttggattgacttatttgagtttatttactgacataagcacttgtg 1830143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 8017583 - 8017538
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtg 477  Q
    |||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  8017583 tttggattgacttatttgaggttatctattgacataagcacttgtg 8017538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 567 - 640
Target Start/End: Complemental strand, 9478303 - 9478230
Alignment:
Q  567 atatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||||||||| |  |||| ||||| ||||||  || ||||||| || ||||||||||| |||||||    
T  9478303 atatagcttatatgaaaatattttgagtttattttatctactgttatagaaatagcttatacataaacacttat 9478230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 21616580 - 21616629
Alignment:
Q  431 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||| || ||| | ||||||||||||| ||||||||    
T  21616580 atttggattgacttatttcagtttatccactgacataaacatttgtgaga 21616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 432 - 481
Target Start/End: Original strand, 26372648 - 26372697
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgagaa 481  Q
    |||||||||||| ||||||||||| || ||||||||| || |||||||||    
T  26372648 tttggattgactcatttgagcttatcttctgacataagcatttgtgagaa 26372697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 436 - 469
Target Start/End: Original strand, 41516949 - 41516982
Alignment:
Q  436 gattgacttatttgagcttacctactgacataaa 469  Q
    |||||||||||||||||||||||||| |||||||    
T  41516949 gattgacttatttgagcttacctactcacataaa 41516982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 640
Target Start/End: Complemental strand, 44590011 - 44589966
Alignment:
Q  595 ttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| ||||| ||||||||||||  |||||||||||||||||||||    
T  44590011 ttatcttatcatttgctatagaaacaacttatacataagcacttat 44589966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 433 - 480
Target Start/End: Complemental strand, 1017176 - 1017129
Alignment:
Q  433 ttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgaga 1017129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 432 - 495
Target Start/End: Complemental strand, 24193681 - 24193618
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgagaagtgaaactatttgg 495  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||  |||| |||||||||    
T  24193681 tttggattgacttatttgagcttatctcctggcataaacacttgtgagttgtgagactatttgg 24193618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 429 - 480
Target Start/End: Original strand, 32420976 - 32421027
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  32420976 ctatttggattgacttatttgagcttacctactagcataagcacttgtgaga 32421027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 430 - 480
Target Start/End: Original strand, 18628472 - 18628522
Alignment:
Q  430 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||| ||||||| |||||||||||| ||||||||||||||||||||||||    
T  18628472 tatttagattgacgtatttgagcttatctactgacataaacacttgtgaga 18628522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 8130177 - 8130105
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| |  |||| |||||||||||||||| |||||||  |||| |||| |||||||||||    
T  8130177 tatagcttatatgaaaataatttgactttatgttatcttttgttatagaaagaactcatacgtaagcacttat 8130105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 18512440 - 18512484
Alignment:
Q  436 gattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||    
T  18512440 gattaacttatttgagcttatctactgacataaacacttgtgaga 18512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 656
Target Start/End: Original strand, 21593079 - 21593166
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataaacgcctaat 656  Q
    ||||||||||||||||| || |||| ||||| |||||||| | ||||||| ||  ||||||||||||||||| ||||||| | ||||||    
T  21593079 tatagcttatatgaaaatag-ttgactttattttatctttagttatagaaatagtttatacataagcacttacgctataagcacctaat 21593166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 30207638 - 30207709
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| || ||||||| || |||| ||||| ||||||| |||| |||||||||||||||||    
T  30207638 tatagcttatatgaaaacagtttgattt-attttattttttgttatagaactaacatatacataagcacttat 30207709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 632
Target Start/End: Original strand, 44119229 - 44119293
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataa 632  Q
    ||||||||||||||||| |  |||| ||| | |||||||||||||||||| ||||||||||||||    
T  44119229 tatagcttatatgaaaacatattgactttgttttatcttttgctatagaaataacttatacataa 44119293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 640
Target Start/End: Complemental strand, 19422420 - 19422349
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| |||||||||||| | |||| |||||  ||||||||| ||||||| ||||||||||||||||| ||||    
T  19422420 atagtttatatgaaaaatgtttgactttattatatcttttgttatagaaataacttatacataagcatttat 19422349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 569 - 635
Target Start/End: Original strand, 25487613 - 25487679
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagca 635  Q
    |||||||||||||||||| | ||| ||||| |||| ||||| ||||||| || ||||||||||||||    
T  25487613 atagcttatatgaaaaaaacgtgactttattttattttttgttatagaaatagcttatacataagca 25487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 468
Target Start/End: Original strand, 27043751 - 27043787
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataa 468  Q
    |||||||||||||||||||||||| ||||||||||||    
T  27043751 tttggattgacttatttgagcttatctactgacataa 27043787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 30024703 - 30024631
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| |  || | ||||| |||||||||| ||||||| |||||||| |||||| ||||||    
T  30024703 tatagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtacttat 30024631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 54325104 - 54325176
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| || |||| ||||| ||||||||||  |||||| ||  ||||||| ||||||||||    
T  54325104 tatagcttatatgaaaacagtttgactttattttatcttttgtaatagaaatagtttatacacaagcacttat 54325176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 56186803 - 56186867
Alignment:
Q  416 tgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||| || | |||||||| ||||||| ||| ||| ||||| ||||||||||||||||||    
T  56186803 tgaaactaaacacttgtttggattaacttattcgagtttatctactaacataaacacttgtgaga 56186867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 22845620 - 22845674
Alignment:
Q  425 agacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||  ||||||||||    
T  22845620 agacctatttggattggcttatttgagcttatctact-acataagtacttgtgaga 22845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 649
Target Start/End: Complemental strand, 23815363 - 23815292
Alignment:
Q  578 atgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataaac 649  Q
    ||||||| || ||||  |||| |||||||||| ||||||| ||||||| |||| |||| |||||||||||||    
T  23815363 atgaaaacagtttgacattattttatcttttgttatagaaataacttaaacattagcatttatgctataaac 23815292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 1075607 - 1075561
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||| |||| |||||||||||||| |||||| |||||||||||||||    
T  1075607 tttgaattggcttatttgagcttatctactggcataaacacttgtga 1075561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 430 - 480
Target Start/End: Complemental strand, 19305077 - 19305027
Alignment:
Q  430 tatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||||||||||||||| ||| ||| |||||||| || ||||||||    
T  19305077 tatttggattgacttatttgagattatctattgacataagcatttgtgaga 19305027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 28259422 - 28259376
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||||    
T  28259422 tttggactgacttatttgagcttatcaactgacataagcacttgtga 28259376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 651
Target Start/End: Original strand, 4663801 - 4663846
Alignment:
Q  606 tttgctatagaattaacttatacataagcacttatgctataaacgc 651  Q
    |||| ||||||| |||||||||||||||||||||| | ||||||||    
T  4663801 tttgttatagaaataacttatacataagcacttatacgataaacgc 4663846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 639
Target Start/End: Original strand, 4798652 - 4798697
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    ||||| |||||||||| ||||||| || ||||||||||||||||||    
T  4798652 tttattttatcttttgatatagaaatagcttatacataagcactta 4798697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 640
Target Start/End: Complemental strand, 28623265 - 28623220
Alignment:
Q  595 ttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| |||||||||| |||| || ||||||||||||||||||||||    
T  28623265 ttattttatcttttgttatataaataacttatacataagcacttat 28623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 579 - 640
Target Start/End: Complemental strand, 47970310 - 47970249
Alignment:
Q  579 tgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| || |||| || || |||||||||| ||||||| || |||||||||||||||||||    
T  47970310 tgaaaatagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttat 47970249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 637
Target Start/End: Complemental strand, 49219142 - 49219073
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcact 637  Q
    ||||||||||||||||| |  |||| ||||| |||| ||||| ||||||| |||||||||| ||| ||||    
T  49219142 tatagcttatatgaaaataatttgactttattttatattttgttatagaaataacttatacctaaccact 49219073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 1395673 - 1395595
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    |||||||||||||||| |  |||| ||||| |||||||||| ||||||| || |||||||||| |||||| ||||||||    
T  1395673 atagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacatatgcacttttgctataa 1395595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 22667556 - 22667504
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22667556 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22667504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 22724195 - 22724143
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||| ||||| |||||||||||||| |||||||||||| |||||||||||    
T  22724195 cctatttcgattggcttatttgagcttatctactgacataagcacttgtgaga 22724143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 640
Target Start/End: Original strand, 41028919 - 41028990
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||| |||||| || |||| ||||| || ||||||| ||||||| || |||||||||||||||||||    
T  41028919 atagcttatttgaaaacagattgactttattttttcttttgttatagaaatagcttatacataagcacttat 41028990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 649
Target Start/End: Original strand, 24235750 - 24235831
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttatgctataaac 649  Q
    ||||||||||||  ||| || |||| ||||| |||||||||| ||||||| ||||||||||| |||  |||||| |||||||    
T  24235750 tatagcttatattcaaatagtttgactttatattatcttttgttatagaaataacttatacacaagtgcttatgttataaac 24235831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 20210849 - 20210897
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||||| ||||||||| ||| |||||||||||| |||||||||||    
T  20210849 tttggattgatttatttgaggttatctactgacataaccacttgtgaga 20210897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 21872216 - 21872264
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||| |||||||||| |||| |||||||||||| |||||||||||    
T  21872216 tttggattaacttatttgatcttatctactgacataagcacttgtgaga 21872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 639
Target Start/End: Original strand, 3182429 - 3182500
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    |||| ||| |||||||| |  |||| ||||| ||||||||| |||||||| |||||||||||||| ||||||    
T  3182429 tataacttgtatgaaaacaatttgactttattttatctttttctatagaagtaacttatacataaacactta 3182500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 639
Target Start/End: Original strand, 20192673 - 20192744
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    ||||| |||||||||||  | |||| ||||| |||||||||| |||| || || ||||||||||||||||||    
T  20192673 tatagattatatgaaaactgtttgactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 568 - 635
Target Start/End: Complemental strand, 23785258 - 23785191
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagca 635  Q
    ||||||||||||||| | || |||| ||||| ||||||| |||| ||||| |||||||| ||||||||    
T  23785258 tatagcttatatgaatacagtttgactttattttatcttctgctgtagaaataacttatgcataagca 23785191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 467
Target Start/End: Original strand, 26990146 - 26990181
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacata 467  Q
    |||||||||||||||||||||||| |||||||||||    
T  26990146 tttggattgacttatttgagcttatctactgacata 26990181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 429 - 476
Target Start/End: Original strand, 41848634 - 41848681
Alignment:
Q  429 ctatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    |||||| |||||||||||||||| ||| ||||| ||||||||||||||    
T  41848634 ctatttagattgacttatttgagtttatctactaacataaacacttgt 41848681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 640
Target Start/End: Original strand, 49586984 - 49587054
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||||||| || |||| ||||| |||||||||| ||||||| || ||||||  |||||||||||    
T  49586984 atagcttatatgaaaacagtttgactttattttatcttttgttatagaaatagcttata-gtaagcacttat 49587054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 432 - 479
Target Start/End: Complemental strand, 51929890 - 51929843
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    |||||||||||||||||||||||| ||| |  ||||||||||||||||    
T  51929890 tttggattgacttatttgagcttatctattagcataaacacttgtgag 51929843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 426 - 468
Target Start/End: Original strand, 16072956 - 16072998
Alignment:
Q  426 gacctatttggattgacttatttgagcttacctactgacataa 468  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||    
T  16072956 gacctgtttggattgacttatttgagcttatctaatgacataa 16072998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 640
Target Start/End: Original strand, 16790181 - 16790227
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||| |||||||||| ||||||| ||||||||| ||||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttat 16790227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 31512532 - 31512486
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||||||||| ||||||||||||||||  ||| |||||||||||    
T  31512532 tttggattgacttgtttgagcttacctactagcatgaacacttgtga 31512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 594 - 640
Target Start/End: Complemental strand, 39971296 - 39971250
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||| |||||||||| |||| || ||||||||||||||||||||||    
T  39971296 tttattttatcttttgttatataagtaacttatacataagcacttat 39971250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 568 - 638
Target Start/End: Original strand, 43116495 - 43116565
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    |||||||||||||||||  | ||||||| || |||||||||| ||||||| || |||| |||||| |||||    
T  43116495 tatagcttatatgaaaattgtttgatttgattttatcttttgttatagaaatagcttacacataaacactt 43116565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 647
Target Start/End: Original strand, 2128344 - 2128397
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    ||||| |||||||||| ||||||| || ||||||||||| | ||||||||||||    
T  2128344 tttattttatcttttgttatagaaatagcttatacataaacgcttatgctataa 2128397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 640
Target Start/End: Original strand, 20173982 - 20174027
Alignment:
Q  595 ttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| |||||||||| ||||||| ||||| ||||||||||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataagcacttat 20174027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 468
Target Start/End: Complemental strand, 26911741 - 26911704
Alignment:
Q  431 atttggattgacttatttgagcttacctactgacataa 468  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  26911741 atttggattgacttatttgagtttatctactgacataa 26911704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 571 - 640
Target Start/End: Complemental strand, 27792872 - 27792803
Alignment:
Q  571 agcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||||| || ||||  |||| |||||||||| | | ||| || |||||||||||||||||||    
T  27792872 agcttatatgaaaatagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttat 27792803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 480
Target Start/End: Original strand, 33965412 - 33965457
Alignment:
Q  435 ggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||| |||||||||||| |||||||| ||||||| |||||||    
T  33965412 ggattgacatatttgagcttatctactgacttaaacacatgtgaga 33965457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 640
Target Start/End: Complemental strand, 41159102 - 41159040
Alignment:
Q  576 atatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||  |||| ||||| |||||||| | ||||| | ||||||||||||||||||||||    
T  41159102 atatgaaaaaa--ttgactttattttatctttagttataggaataacttatacataagcacttat 41159040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 638
Target Start/End: Original strand, 53736185 - 53736250
Alignment:
Q  573 cttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    |||||||||||| || ||||  |||| |||||||||| ||||||| ||||| |||| |||||||||    
T  53736185 cttatatgaaaatagtttgacattattttatcttttgttatagaaataactcatacgtaagcactt 53736250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 640
Target Start/End: Original strand, 1145 - 1213
Alignment:
Q  572 gcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||| || || |||| ||||| |||||||||| ||||||| || |||||||||||||||||||    
T  1145 gcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttat 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 572 - 640
Target Start/End: Complemental strand, 2830 - 2762
Alignment:
Q  572 gcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||| || || |||| ||||| |||||||||| ||||||| || |||||||||||||||||||    
T  2830 gcttatatgagaatagtttgactttattttatcttttgttatagaaatagcttatacataagcacttat 2762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 568 - 640
Target Start/End: Complemental strand, 3945277 - 3945205
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||| |||| ||||| ||||||| |||||||||| ||| ||| ||||||||| |||| |||||||    
T  3945277 tatagcttatataaaaatagcttcattttattttatcttttgttattgaaataacttatatataaacacttat 3945205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 432 - 479
Target Start/End: Complemental strand, 4560651 - 4560604
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgag 479  Q
    |||||||||||||||||||||||| ||| |||||||| ||||||||||    
T  4560651 tttggattgacttatttgagcttatctattgacataagcacttgtgag 4560604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 434 - 481
Target Start/End: Complemental strand, 10560194 - 10560147
Alignment:
Q  434 tggattgacttatttgagcttacctactgacataaacacttgtgagaa 481  Q
    |||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  10560194 tggattgacttagttgagcttatctactgacataaacatttgtgagaa 10560147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 569 - 640
Target Start/End: Complemental strand, 11494155 - 11494084
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| |||||||||||||| |||| |||||||||||||||| |||  || |||| |||||| ||||||||||    
T  11494155 atagtttatatgaaaaaagtttgactttatgttatcttttgttatgaaaataacatatacaaaagcacttat 11494084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 647
Target Start/End: Complemental strand, 1930028 - 1929975
Alignment:
Q  594 tttatgttatcttttgctatagaattaacttatacataagcacttatgctataa 647  Q
    ||||| ||||||||| |||||||| |||||||||||||||| ||| ||||||||    
T  1930028 tttattttatctttttctatagaaataacttatacataagcgcttgtgctataa 1929975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 640
Target Start/End: Complemental strand, 10114466 - 10114421
Alignment:
Q  595 ttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| |||||||||||||||||| || |||||||||||||||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatacataagcacttat 10114421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 476
Target Start/End: Complemental strand, 34291039 - 34290974
Alignment:
Q  411 aattgtgaaactaaagacctatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    |||| |||||||| || ||||||| ||||||||| |||||| | | ||||||||||||||||||||    
T  34291039 aattttgaaactagaggcctatttcgattgacttgtttgagttcatctactgacataaacacttgt 34290974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 644
Target Start/End: Complemental strand, 1561250 - 1561206
Alignment:
Q  600 ttatcttttgctatagaattaacttatacataagcacttatgcta 644  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||    
T  1561250 ttatctttcgttatagaaataacttatacataagcacttatgcta 1561206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 476
Target Start/End: Complemental strand, 1821982 - 1821934
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1821982 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1821934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 428 - 476
Target Start/End: Complemental strand, 1856427 - 1856379
Alignment:
Q  428 cctatttggattgacttatttgagcttacctactgacataaacacttgt 476  Q
    |||||||| |||||||||||||||||||  ||| |||||||||||||||    
T  1856427 cctatttgaattgacttatttgagcttagataccgacataaacacttgt 1856379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 7714391 - 7714343
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||||||||  || || |||||||||||||||||    
T  7714391 tttggattgacttatttgagcttatataatgtcataaacacttgtgaga 7714343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 9700150 - 9700102
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    |||||||| ||||||||||||||| |||||  |||||||||||||||||    
T  9700150 tttggattaacttatttgagcttatctactagcataaacacttgtgaga 9700102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 576 - 640
Target Start/End: Original strand, 11188230 - 11188294
Alignment:
Q  576 atatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||| |||| || ||| |||||| |||||||||| |||||||  |||||||||||||||||||||    
T  11188230 atataaaaatagtttggttttattttatcttttgttatagaaacaacttatacataagcacttat 11188294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 18331863 - 18331815
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||||| |||| ||||| |||||| |||||||||||    
T  18331863 tttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 430 - 478
Target Start/End: Original strand, 22705031 - 22705079
Alignment:
Q  430 tatttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||||| |||| |||||||||||||||||| | ||||||||||||||||    
T  22705031 tatttgaattggcttatttgagcttacctattaacataaacacttgtga 22705079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 432 - 468
Target Start/End: Complemental strand, 38602476 - 38602440
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataa 468  Q
    |||||||||||||||||||||||| ||||||||||||    
T  38602476 tttggattgacttatttgagcttatctactgacataa 38602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 640
Target Start/End: Original strand, 3645884 - 3645955
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||||||| || |||||||| | |||| ||||  ||||||| || |||||||| ||||||||||    
T  3645884 atagcttatatgaaaatagtttgattttgttttatattttcttatagaaatagcttatacacaagcacttat 3645955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 633
Target Start/End: Original strand, 5071040 - 5071099
Alignment:
Q  574 ttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataag 633  Q
    |||||||||||||| |||| ||||| |||| |||| ||||||||  ||||||||||||||    
T  5071040 ttatatgaaaaaagtttgactttattttatattttactatagaaacaacttatacataag 5071099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 569 - 640
Target Start/End: Original strand, 14280469 - 14280540
Alignment:
Q  569 atagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||||||||||||| |  || |||| || |||||||||||||||||| ||  |||||||||||| |||||    
T  14280469 atagcttatatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataagcgcttat 14280540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 640
Target Start/End: Complemental strand, 31916593 - 31916546
Alignment:
Q  593 ttttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |||||    
T  31916593 ttttatgttatcttttgttatagaataagcttatacataagcgcttat 31916546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Complemental strand, 2606198 - 2606152
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    |||||||||||||||| ||||||| |||||||||||| |||| ||||    
T  2606198 tttggattgacttattcgagcttatctactgacataatcactagtga 2606152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 474
Target Start/End: Complemental strand, 8060817 - 8060775
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacactt 474  Q
    ||||||||||||||||||||| || ||| ||||||||||||||    
T  8060817 tttggattgacttatttgagcatatctattgacataaacactt 8060775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 43368615 - 43368669
Alignment:
Q  426 gacctatttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||| ||||||||||||||||||| |||| ||||| |||||| || ||||||||    
T  43368615 gacctgtttggattgacttatttgatcttatctactaacataagcatttgtgaga 43368669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 480
Target Start/End: Complemental strand, 1561427 - 1561378
Alignment:
Q  431 atttggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||| |||||||| |||| ||| || |||||||||||||||||    
T  1561427 atttggattgatttatttgatcttatctaatggcataaacacttgtgaga 1561378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 435 - 480
Target Start/End: Complemental strand, 6950468 - 6950423
Alignment:
Q  435 ggattgacttatttgagcttacctactgacataaacacttgtgaga 480  Q
    ||||||||||||||||| ||| |||||| |||||||| ||||||||    
T  6950468 ggattgacttatttgagtttatctactggcataaacatttgtgaga 6950423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 13652184 - 13652147
Alignment:
Q  602 atcttttgctatagaattaacttatacataagcactta 639  Q
    |||||||||||||||| || ||||||||||||||||||    
T  13652184 atcttttgctatagaaatagcttatacataagcactta 13652147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 602 - 639
Target Start/End: Complemental strand, 13710827 - 13710790
Alignment:
Q  602 atcttttgctatagaattaacttatacataagcactta 639  Q
    |||||||||||||||| || ||||||||||||||||||    
T  13710827 atcttttgctatagaaatagcttatacataagcactta 13710790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 573 - 638
Target Start/End: Original strand, 29056063 - 29056128
Alignment:
Q  573 cttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactt 638  Q
    |||||||||||| |  |||| ||||| |||||||||||| ||||| || ||||||||||| |||||    
T  29056063 cttatatgaaaacaaattgactttattttatcttttgctctagaagtagcttatacataaacactt 29056128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 568 - 639
Target Start/End: Complemental strand, 27579 - 27508
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcactta 639  Q
    ||||| ||||||||||| |  |||| ||||| ||||||| || ||||||| |||||||||||||||||||||    
T  27579 tatagtttatatgaaaacaatttgactttattttatcttctgttatagaaataacttatacataagcactta 27508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 33; Significance: 0.000000005; HSPs: 2)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 1791 - 1863
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| |||||||||| |  || | ||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  1791 tatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 1863  T

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Target: scaffold0549; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 568 - 640
Target Start/End: Original strand, 3881 - 3953
Alignment:
Q  568 tatagcttatatgaaaaaagcttgattttatgttatcttttgctatagaattaacttatacataagcacttat 640  Q
    |||||| |||||||||| |  || | ||||| |||||||||| |||||||||| |||||| ||||||||||||    
T  3881 tatagcgtatatgaaaataaattaactttattttatcttttgttatagaattatcttatatataagcacttat 3953  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 432 - 478
Target Start/End: Original strand, 159894 - 159940
Alignment:
Q  432 tttggattgacttatttgagcttacctactgacataaacacttgtga 478  Q
    ||||||||| |||||||||||||| ||||| | ||||||||||||||    
T  159894 tttggattggcttatttgagcttatctactaatataaacacttgtga 159940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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