View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_103 (Length: 363)
Name: NF10829A_low_103
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_103 |
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Alignment Details
Target: chr7 (Bit Score: 313; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 7 - 348
Target Start/End: Original strand, 43227487 - 43227828
Alignment:
| Q |
7 |
gattgagctagaaattgatgacatccttttcaacaaactctaaagaagaagtacggagtttattaccattattaacccacacataatgaatagtgacaac |
106 |
Q |
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| T |
43227487 |
gattgagctagaaattgatgacatccttttcaacaaactctaaagaagaagtacggagtttattaccattattaacccacacataatgaatagtgacaac |
43227586 |
T |
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| Q |
107 |
atccatgcatacacatcttctaaaagtaacaagtcaatcgggttaaacacttggtgccgactacatagaaaacgatttggtattaaatcaatgaatgaat |
206 |
Q |
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| T |
43227587 |
atccatgcatacacatcttctaaaagtaacaagtcaatcgggttaaacacttggtgccgactacatagaaaacgatttggtataaaatcaatcaatgaat |
43227686 |
T |
|
| Q |
207 |
tatgaataccatatgttgtgtggaatgcactttttagcataggccacatagaaaagtgttgaacnnnnnnntgagatttaaaaggaaaggaggagctgta |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
43227687 |
tatgaataccatatgttgtgtggaatgcactttttagcataggccacatagaaaagtgttgaacaaaaaaatgagatttaaaaggaaaggaggagctgta |
43227786 |
T |
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| Q |
307 |
tagagggtagtagcccctacaccttacaagtgtccaacgaat |
348 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
43227787 |
tagagggtagtagcccctacaccttacaagtgtccaacgaat |
43227828 |
T |
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