View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10829A_low_144 (Length: 330)

Name: NF10829A_low_144
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10829A_low_144
NF10829A_low_144
[»] chr7 (35 HSPs)
chr7 (4-212)||(3598144-3598352)
chr7 (206-330)||(22004525-22004649)
chr7 (206-330)||(7891302-7891426)
chr7 (244-330)||(22004472-22004558)
chr7 (244-330)||(3600141-3600227)
chr7 (244-330)||(22004281-22004367)
chr7 (245-330)||(3061577-3061662)
chr7 (248-327)||(13927402-13927481)
chr7 (246-328)||(7891251-7891333)
chr7 (244-330)||(13400683-13400769)
chr7 (244-330)||(20959379-20959465)
chr7 (244-330)||(45112724-45112810)
chr7 (244-325)||(5090925-5091006)
chr7 (245-330)||(5091046-5091131)
chr7 (244-327)||(32656701-32656784)
chr7 (244-330)||(7890754-7890840)
chr7 (244-330)||(29954261-29954347)
chr7 (244-330)||(32656801-32656887)
chr7 (244-330)||(7884950-7885036)
chr7 (244-330)||(13927131-13927217)
chr7 (244-330)||(22003522-22003608)
chr7 (245-330)||(31097969-31098054)
chr7 (206-270)||(22004334-22004398)
chr7 (244-308)||(7889201-7889265)
chr7 (244-295)||(26161936-26161987)
chr7 (244-299)||(27712710-27712765)
chr7 (264-330)||(13927271-13927337)
chr7 (244-299)||(16719044-16719099)
chr7 (244-299)||(17693254-17693309)
chr7 (247-289)||(3600053-3600095)
chr7 (244-298)||(32035245-32035299)
chr7 (260-298)||(16719118-16719156)
chr7 (260-298)||(17693328-17693366)
chr7 (260-298)||(27712784-27712822)
chr7 (206-239)||(3600141-3600174)
[»] chr4 (38 HSPs)
chr4 (206-330)||(41861931-41862055)
chr4 (206-330)||(41862022-41862146)
chr4 (206-330)||(41862113-41862237)
chr4 (206-330)||(41946630-41946754)
chr4 (206-330)||(52680279-52680403)
chr4 (206-323)||(41946546-41946663)
chr4 (210-321)||(22673857-22673970)
chr4 (244-330)||(41862204-41862290)
chr4 (244-330)||(22673800-22673886)
chr4 (246-330)||(52680228-52680312)
chr4 (244-330)||(16905847-16905933)
chr4 (244-330)||(21380331-21380417)
chr4 (244-330)||(29363835-29363921)
chr4 (244-330)||(35756434-35756520)
chr4 (244-330)||(42345128-42345214)
chr4 (244-330)||(42345249-42345335)
chr4 (244-330)||(41946721-41946809)
chr4 (244-325)||(53285654-53285735)
chr4 (247-330)||(29363714-29363797)
chr4 (248-330)||(28380273-28380355)
chr4 (244-330)||(29363507-29363593)
chr4 (244-330)||(30390808-30390894)
chr4 (244-330)||(41862395-41862481)
chr4 (245-330)||(53285775-53285860)
chr4 (246-330)||(52679754-52679838)
chr4 (206-270)||(41862364-41862428)
chr4 (244-330)||(41863144-41863230)
chr4 (250-330)||(22673311-22673391)
chr4 (264-326)||(41946484-41946546)
chr4 (244-299)||(14148570-14148625)
chr4 (246-299)||(14148424-14148477)
chr4 (244-299)||(19518506-19518561)
chr4 (244-299)||(21585322-21585377)
chr4 (244-299)||(25819694-25819749)
chr4 (260-298)||(14148513-14148551)
chr4 (260-298)||(19518449-19518487)
chr4 (260-298)||(21585265-21585303)
chr4 (260-298)||(25819768-25819806)
[»] chr5 (33 HSPs)
chr5 (207-330)||(32672812-32672935)
chr5 (206-330)||(23179551-23179675)
chr5 (4-212)||(4356672-4356883)
chr5 (244-330)||(23179498-23179584)
chr5 (244-330)||(20844464-20844550)
chr5 (244-330)||(20844711-20844797)
chr5 (244-330)||(32672758-32672844)
chr5 (244-330)||(20842313-20842399)
chr5 (244-330)||(23179307-23179393)
chr5 (245-330)||(20844956-20845041)
chr5 (244-326)||(10037200-10037282)
chr5 (244-330)||(12651303-12651389)
chr5 (244-330)||(20842462-20842548)
chr5 (244-330)||(20845104-20845190)
chr5 (244-330)||(23178426-23178512)
chr5 (244-330)||(23180087-23180173)
chr5 (244-330)||(23184355-23184441)
chr5 (244-330)||(34757349-34757435)
chr5 (244-330)||(39874183-39874269)
chr5 (244-330)||(23178684-23178770)
chr5 (244-330)||(32672000-32672086)
chr5 (206-270)||(23179360-23179424)
chr5 (244-299)||(3611844-3611899)
chr5 (244-299)||(20109130-20109185)
chr5 (244-299)||(20109898-20109953)
chr5 (244-297)||(30094369-30094422)
chr5 (260-298)||(3611787-3611825)
chr5 (263-298)||(30094310-30094345)
chr5 (260-298)||(20109073-20109111)
chr5 (260-298)||(20109708-20109746)
chr5 (260-298)||(20109841-20109879)
chr5 (206-239)||(20844517-20844550)
chr5 (206-239)||(32672902-32672935)
[»] scaffold0121 (4 HSPs)
scaffold0121 (206-330)||(41251-41375)
scaffold0121 (206-330)||(41342-41466)
scaffold0121 (244-330)||(41198-41284)
scaffold0121 (244-330)||(40836-40922)
[»] chr3 (55 HSPs)
chr3 (206-326)||(18199363-18199483)
chr3 (206-330)||(36093865-36093989)
chr3 (206-330)||(26949059-26949183)
chr3 (244-330)||(6953283-6953369)
chr3 (244-330)||(18199310-18199396)
chr3 (244-330)||(36093956-36094042)
chr3 (244-327)||(36947998-36948081)
chr3 (244-327)||(36947859-36947942)
chr3 (244-330)||(855083-855169)
chr3 (244-330)||(6953422-6953508)
chr3 (244-326)||(6953808-6953890)
chr3 (244-330)||(26943661-26943747)
chr3 (244-330)||(31483612-31483698)
chr3 (244-330)||(35713152-35713238)
chr3 (244-326)||(36947721-36947803)
chr3 (244-330)||(47724563-47724649)
chr3 (244-330)||(6953665-6953751)
chr3 (244-330)||(18199133-18199219)
chr3 (244-330)||(36094147-36094233)
chr3 (244-330)||(49565985-49566071)
chr3 (244-330)||(1883333-1883419)
chr3 (244-330)||(11823965-11824051)
chr3 (244-330)||(18256766-18256852)
chr3 (244-330)||(26943947-26944033)
chr3 (236-330)||(38662133-38662227)
chr3 (244-330)||(43509692-43509778)
chr3 (244-327)||(36947581-36947664)
chr3 (244-330)||(36094904-36094990)
chr3 (206-270)||(26943714-26943778)
chr3 (244-327)||(36091001-36091084)
chr3 (244-315)||(52419528-52419599)
chr3 (264-330)||(6953561-6953627)
chr3 (244-330)||(26943036-26943122)
chr3 (244-330)||(33006047-33006132)
chr3 (244-330)||(35860522-35860608)
chr3 (244-330)||(36095119-36095205)
chr3 (265-330)||(854955-855020)
chr3 (206-270)||(36094116-36094180)
chr3 (246-321)||(38662177-38662251)
chr3 (244-330)||(851263-851349)
chr3 (244-299)||(13458625-13458680)
chr3 (244-299)||(17657186-17657241)
chr3 (244-294)||(18256681-18256731)
chr3 (244-297)||(16647464-16647517)
chr3 (265-330)||(26949027-26949092)
chr3 (244-299)||(4585544-4585599)
chr3 (244-299)||(12257894-12257949)
chr3 (260-298)||(4585618-4585656)
chr3 (260-298)||(12257968-12258006)
chr3 (260-298)||(13458568-13458606)
chr3 (263-298)||(16647541-16647576)
chr3 (206-239)||(854987-855020)
chr3 (206-239)||(6953283-6953316)
chr3 (206-239)||(6953422-6953455)
chr3 (207-239)||(855137-855169)
[»] chr2 (51 HSPs)
chr2 (206-330)||(13905817-13905941)
chr2 (206-330)||(26453454-26453578)
chr2 (206-330)||(40603290-40603413)
chr2 (244-330)||(13905764-13905850)
chr2 (244-330)||(13899866-13899952)
chr2 (244-330)||(35433131-35433217)
chr2 (246-330)||(26453403-26453487)
chr2 (246-330)||(40603239-40603323)
chr2 (244-330)||(1925635-1925721)
chr2 (244-330)||(19640917-19641003)
chr2 (244-330)||(19839510-19839596)
chr2 (244-330)||(32287283-32287369)
chr2 (244-327)||(32287422-32287505)
chr2 (244-330)||(5001110-5001196)
chr2 (244-330)||(5012780-5012866)
chr2 (244-330)||(26452906-26452992)
chr2 (244-330)||(36440093-36440179)
chr2 (244-330)||(180217-180303)
chr2 (244-330)||(980013-980099)
chr2 (244-330)||(980466-980552)
chr2 (244-330)||(1501801-1501887)
chr2 (244-330)||(2444130-2444216)
chr2 (244-330)||(13899107-13899193)
chr2 (244-330)||(42111658-42111744)
chr2 (244-309)||(204371-204436)
chr2 (206-270)||(13899919-13899983)
chr2 (244-330)||(14039724-14039810)
chr2 (244-330)||(19641079-19641165)
chr2 (244-330)||(19839672-19839758)
chr2 (244-330)||(27999646-27999732)
chr2 (244-330)||(28090380-28090466)
chr2 (244-330)||(28096703-28096789)
chr2 (244-330)||(40602742-40602828)
chr2 (244-330)||(21591174-21591260)
chr2 (244-330)||(32287019-32287105)
chr2 (244-302)||(35433010-35433068)
chr2 (246-302)||(1925514-1925570)
chr2 (264-327)||(32287143-32287206)
chr2 (260-330)||(980261-980331)
chr2 (244-299)||(2296987-2297042)
chr2 (244-299)||(25643748-25643803)
chr2 (244-299)||(6120848-6120903)
chr2 (260-298)||(2297061-2297099)
chr2 (260-298)||(6120922-6120960)
chr2 (260-298)||(25643822-25643860)
chr2 (247-299)||(13900066-13900121)
chr2 (260-298)||(13900140-13900178)
chr2 (202-239)||(27999646-27999683)
chr2 (202-239)||(28090380-28090417)
chr2 (202-239)||(28096703-28096740)
chr2 (206-239)||(35433131-35433164)
[»] chr1 (37 HSPs)
chr1 (206-330)||(2051966-2052090)
chr1 (206-330)||(35598057-35598181)
chr1 (206-302)||(39514136-39514232)
chr1 (244-330)||(39514199-39514285)
chr1 (244-330)||(45507246-45507332)
chr1 (236-330)||(35597680-35597773)
chr1 (244-330)||(35598148-35598234)
chr1 (246-330)||(2052057-2052141)
chr1 (244-330)||(22194886-22194972)
chr1 (244-330)||(22195056-22195142)
chr1 (244-330)||(36455233-36455319)
chr1 (244-330)||(48647762-48647848)
chr1 (249-330)||(45507395-45507476)
chr1 (246-330)||(15689400-15689484)
chr1 (244-330)||(15689236-15689322)
chr1 (244-330)||(48958576-48958662)
chr1 (244-330)||(49791604-49791690)
chr1 (244-330)||(50704597-50704683)
chr1 (244-330)||(2585426-2585512)
chr1 (244-330)||(7476035-7476121)
chr1 (244-330)||(7476596-7476682)
chr1 (244-330)||(9530062-9530148)
chr1 (244-330)||(42492481-42492567)
chr1 (244-330)||(45507065-45507151)
chr1 (244-327)||(49791883-49791966)
chr1 (244-330)||(2052552-2052638)
chr1 (244-330)||(13929123-13929209)
chr1 (244-311)||(35597733-35597799)
chr1 (244-299)||(2051777-2051832)
chr1 (244-299)||(36871037-36871092)
chr1 (244-299)||(49791079-49791134)
chr1 (244-299)||(49791456-49791511)
chr1 (260-298)||(49791022-49791060)
chr1 (260-298)||(49791399-49791437)
chr1 (206-239)||(45507246-45507279)
chr1 (206-239)||(45507395-45507428)
chr1 (206-239)||(49791604-49791637)
[»] scaffold0160 (5 HSPs)
scaffold0160 (244-330)||(36090-36176)
scaffold0160 (244-330)||(36239-36324)
scaffold0160 (244-302)||(36387-36445)
scaffold0160 (206-239)||(36143-36176)
scaffold0160 (206-239)||(36291-36324)
[»] chr6 (8 HSPs)
chr6 (244-326)||(3589257-3589339)
chr6 (244-330)||(2271863-2271949)
chr6 (244-330)||(24456440-24456526)
chr6 (244-330)||(29371676-29371762)
chr6 (244-330)||(29374228-29374314)
chr6 (244-330)||(33049710-33049796)
chr6 (244-330)||(33007275-33007360)
chr6 (245-299)||(29921038-29921092)
[»] chr8 (13 HSPs)
chr8 (244-330)||(22732199-22732285)
chr8 (244-330)||(18489942-18490028)
chr8 (244-330)||(19958080-19958166)
chr8 (244-330)||(24014105-24014191)
chr8 (244-330)||(37985435-37985521)
chr8 (244-330)||(21637073-21637159)
chr8 (244-330)||(24011201-24011287)
chr8 (257-330)||(41377801-41377874)
chr8 (244-298)||(18278552-18278606)
chr8 (244-296)||(18489794-18489846)
chr8 (244-299)||(410098-410153)
chr8 (260-298)||(410041-410079)
chr8 (244-277)||(37985590-37985623)
[»] scaffold1113 (1 HSPs)
scaffold1113 (244-330)||(2467-2553)
[»] scaffold0097 (1 HSPs)
scaffold0097 (244-330)||(44623-44709)
[»] scaffold0642 (2 HSPs)
scaffold0642 (244-299)||(314-369)
scaffold0642 (260-298)||(388-426)
[»] scaffold0374 (2 HSPs)
scaffold0374 (244-299)||(107-162)
scaffold0374 (260-298)||(50-88)
[»] scaffold0345 (2 HSPs)
scaffold0345 (244-299)||(10225-10280)
scaffold0345 (260-298)||(10299-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (244-299)||(28700-28755)
scaffold0105 (260-298)||(28643-28681)


Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 212
Target Start/End: Original strand, 3598144 - 3598352
Alignment:
Q  4 cagacaaagtagtagaaatgtgaatctcaatttcactactaaaaatagtcacatctcgaatcgagttaatgataattcagaggttgaaatcaacatatga 103  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  3598144 cagacaaagtagtagaaacgtgaatctcaatttcactactaaaaatagtcacatctcgaatcaagttaatgatacttcagaggttgaaatcaacatatga 3598243  T
Q  104 tgaattttatataaaaacactatagttgacataaaagttttaagactaaagatttaggaactttacctgaagttttacaaaacaatcacaggaagtgata 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3598244 tgaattttatataaaaacactatagttgacataaaagttttaagactaaagatttaggaactttacctgaagttttacaaaacaatcacaggaagtgata 3598343  T
Q  204 atcatgatt 212  Q
    |||||||||    
T  3598344 atcatgatt 3598352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 22004525 - 22004649
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22004525 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 22004624  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  22004625 ctaatttccctcctcctaaaaccta 22004649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 7891302 - 7891426
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||| ||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7891302 catgatttcctaatttccctcctcttaaaaccgaattcccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 7891401  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  7891402 ctaatttccctcctcctaaaaccta 7891426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22004472 - 22004558
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22004472 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 22004558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 3600227 - 3600141
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3600227 ccctccttcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 3600141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22004281 - 22004367
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22004281 ccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 22004367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 245 - 330
Target Start/End: Complemental strand, 3061662 - 3061577
Alignment:
Q  245 cctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  3061662 cctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaaccta 3061577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 13927402 - 13927481
Alignment:
Q  248 ccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  13927402 ccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 13927481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 246 - 328
Target Start/End: Original strand, 7891251 - 7891333
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaacc 328  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  7891251 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaacc 7891333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 13400769 - 13400683
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  13400769 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 13400683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 20959465 - 20959379
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  20959465 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 20959379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 45112724 - 45112810
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  45112724 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 45112810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 5090925 - 5091006
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaa 325  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  5090925 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcactcctcctaaa 5091006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 5091046 - 5091131
Alignment:
Q  245 cctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  5091046 cctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 5091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 32656701 - 32656784
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  32656701 ccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaac 32656784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 7890754 - 7890840
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  7890754 ccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 7890840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 29954261 - 29954347
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  29954261 ccctccttcaaaacctaaccatatttcataactcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaaccta 29954347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 32656801 - 32656887
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  32656801 ccctcattcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 32656887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 7884950 - 7885036
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  7884950 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 7885036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 13927131 - 13927217
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||||| |||||||||||||||||||| |||||| ||||||||||    
T  13927131 ccctccttcaaaacctaactatatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcctgctaaaaccta 13927217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22003522 - 22003608
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  22003522 ccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 22003608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 31097969 - 31098054
Alignment:
Q  245 cctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||| ||| || |||||||||||||||||| ||||| ||||||||| |||||||||||||||||    
T  31097969 cctccttcaaaacctaaccatatttcttaactcccctcctccaaaccctaactatgatctcctaatttccctcctcctaaaaccta 31098054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 22004334 - 22004398
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttc 270  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22004334 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttc 22004398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 244 - 308
Target Start/End: Complemental strand, 7889265 - 7889201
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttccta 308  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  7889265 ccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttccta 7889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 295
Target Start/End: Original strand, 26161936 - 26161987
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaa 295  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26161936 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaa 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 27712710 - 27712765
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  27712710 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 27712765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 264 - 330
Target Start/End: Original strand, 13927271 - 13927337
Alignment:
Q  264 atatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||  ||||||||||||| |||||||||||||||||||| |||| | ||||||||||    
T  13927271 atatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcatgctaaaaccta 13927337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 16719044 - 16719099
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  16719044 ccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 16719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 17693254 - 17693309
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  17693254 ccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 17693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 247 - 289
Target Start/End: Complemental strand, 3600095 - 3600053
Alignment:
Q  247 tccttcaaaacctaaccatatttcctaattcacctcctccaaa 289  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  3600095 tccttcaaaacctaaccatatttcctaattcccctcctccaaa 3600053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 244 - 298
Target Start/End: Original strand, 32035245 - 32035299
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||||||||||  ||||||| ||||||||||||||| ||||    
T  32035245 ccctccttcaaaacctaaccatattctctaattcccctcctccaaaccctcacca 32035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 16719118 - 16719156
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  16719118 aaccatatttcctaattcccctcctccaaaccctaacca 16719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 17693328 - 17693366
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  17693328 aaccatatttcctaattcccctcctccaaaccctaacca 17693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 27712784 - 27712822
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  27712784 aaccatatttcctaattcccctcctccaaaccctaacca 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 3600174 - 3600141
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  3600174 catgatttcctaatttccctcctcctaaaaccta 3600141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 41862055 - 41861931
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41862055 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 41861956  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  41861955 ctaatttccctcctcctaaaaccta 41861931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 41862146 - 41862022
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41862146 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 41862047  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  41862046 ctaatttccctcctcctaaaaccta 41862022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 41862237 - 41862113
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41862237 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 41862138  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  41862137 ctaatttccctcctcctaaaaccta 41862113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 41946754 - 41946630
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  41946754 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttc 41946655  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  41946654 ctaatttccctcctcctaaaaccta 41946630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 52680279 - 52680403
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52680279 catgatttcctaatttccctcctcttaaaacctaattcccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 52680378  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  52680379 ctaatttccctcctcctaaaaccta 52680403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 206 - 323
Target Start/End: Complemental strand, 41946663 - 41946546
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  41946663 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttc 41946564  T
Q  306 ctaattttcctcctccta 323  Q
     |||||||||||||||||    
T  41946563 ttaattttcctcctccta 41946546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 22673857 - 22673970
Alignment:
Q  210 atttcctaatttccctcctcctaagacctaattcccc--tccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcct 307  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22673857 atttcctaatttccctcctcctaaaacctaattcccccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcct 22673956  T
Q  308 aattttcctcctcc 321  Q
    ||||| ||||||||    
T  22673957 aatttccctcctcc 22673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 41862290 - 41862204
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41862290 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41862204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22673800 - 22673886
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  22673800 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccataatttcctaatttccctcctcctaaaaccta 22673886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 52680228 - 52680312
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  52680228 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 52680312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 16905847 - 16905933
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  16905847 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 16905933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 21380331 - 21380417
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  21380331 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 21380417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 29363921 - 29363835
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  29363921 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 29363835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 35756434 - 35756520
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  35756434 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 35756520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 42345128 - 42345214
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  42345128 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 42345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 42345249 - 42345335
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  42345249 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 42345335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 41946809 - 41946721
Alignment:
Q  244 ccctccttcaaaacctaaccatat--ttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41946809 ccctccttcaaaacctaaccatatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41946721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 325
Target Start/End: Original strand, 53285654 - 53285735
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaa 325  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  53285654 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcactcctcctaaa 53285735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 247 - 330
Target Start/End: Complemental strand, 29363797 - 29363714
Alignment:
Q  247 tccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  29363797 tccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 29363714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 248 - 330
Target Start/End: Original strand, 28380273 - 28380355
Alignment:
Q  248 ccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  28380273 ccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 28380355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 29363593 - 29363507
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  29363593 ccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 29363507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 30390894 - 30390808
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  30390894 ccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaactatgatttcctaacttcactcctcctaaaaccta 30390808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 41862481 - 41862395
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41862481 ccctctttcaaaacctaaccatattttctatttcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41862395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 53285775 - 53285860
Alignment:
Q  245 cctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  53285775 cctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 53285860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 52679754 - 52679838
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  52679754 ctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 52679838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 41862428 - 41862364
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttc 270  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41862428 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttc 41862364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 41863230 - 41863144
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  41863230 ccctccatcaaaacctaactatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 41863144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 22673311 - 22673391
Alignment:
Q  250 ttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||  ||||||||||||||||    
T  22673311 ttcaaaacctaaccatatttcctaatttccctcctccaaaccttaaccatgatttcctaacttcactcctcctaaaaccta 22673391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 41946546 - 41946484
Alignment:
Q  264 atatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaa 326  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41946546 atatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcctaaaa 41946484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 14148625 - 14148570
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  14148625 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 14148477 - 14148424
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  14148477 ctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 19518561 - 19518506
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  19518561 ccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 19518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 21585377 - 21585322
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  21585377 ccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 21585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 25819694 - 25819749
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  25819694 ccctcctttaaaacataaccatatttcctaattctcctcctccaaaccttaaccat 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 14148551 - 14148513
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  14148551 aaccatatttcctaattcccctcctccaaaccctaacca 14148513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 19518487 - 19518449
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19518487 aaccatatttcctaattcccctcctccaaaccctaacca 19518449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 21585303 - 21585265
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21585303 aaccatatttcctaattcccctcctccaaaccctaacca 21585265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 25819768 - 25819806
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25819768 aaccatatttcctaattcccctcctccaaaccctaacca 25819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 207 - 330
Target Start/End: Original strand, 32672812 - 32672935
Alignment:
Q  207 atgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcc 306  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32672812 atgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcc 32672911  T
Q  307 taattttcctcctcctaaaaccta 330  Q
    |||||| |||||||||||||||||    
T  32672912 taatttccctcctcctaaaaccta 32672935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 23179551 - 23179675
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  23179551 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttc 23179650  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  23179651 ctaatttccctcctcctaaaaccta 23179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 4 - 212
Target Start/End: Complemental strand, 4356883 - 4356672
Alignment:
Q  4 cagacaaagtagtagaaatgtgaatctcaatttcactactaaaaatagtcac--atctcgaatcgagttaatgataattcagaggttgaaatcaacatat 101  Q
    |||||||||||||||||| ||||||||||||||| |||  ||||||||||||  ||||| | || ||||  ||||| |||| ||||||| ||||| ||||    
T  4356883 cagacaaagtagtagaaacgtgaatctcaatttcgctaacaaaaatagtcacgtatctcaactcaagttcctgatacttcaaaggttgagatcaatatat 4356784  T
Q  102 gatgaattttatataaaaacactatagttgacataaaagttttaagactaaagatttaggaactttacctgaagttttacaaaacaatcacaggaagtga 201  Q
    ||||||| ||||| |||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||||||| || |||| |||||||||| ||    
T  4356783 gatgaatattatagaaaaacactatagttgacataaaaatttaaatactaaagattaaggaactttacctgaagttttgcagaacagtcacaggaagcga 4356684  T
Q  202 t-aatcatgatt 212  Q
    | ||||||||||    
T  4356683 tgaatcatgatt 4356672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 23179498 - 23179584
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23179498 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 23179584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 20844464 - 20844550
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20844464 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 20844550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 20844711 - 20844797
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20844711 ccctcattcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 20844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 32672758 - 32672844
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  32672758 ccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaatttccctcctcctaaaaccta 32672844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 20842313 - 20842399
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  20842313 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcccttctcctaaaaccta 20842399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 23179307 - 23179393
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  23179307 ccctccttcaaaacctaaccatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctcttcctaaaaccta 23179393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 245 - 330
Target Start/End: Original strand, 20844956 - 20845041
Alignment:
Q  245 cctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  20844956 cctccttcaaaacctaacaatatttcctaattcccttcctccaaaccctaactatgatttcctaatttacctcctcctaaaaccta 20845041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 10037200 - 10037282
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaa 326  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||  ||||||||||||    
T  10037200 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctcctaaaa 10037282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 12651303 - 12651389
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  12651303 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 12651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 20842462 - 20842548
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||| |||||||| |||||||||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  20842462 ccctcattcaaaacataaccatatttcataattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaaccta 20842548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 20845104 - 20845190
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||| ||||||| |||||||||    
T  20845104 ccctccttcaaaacctaactatatttcctaattctcctccttcaaaccctaaccatgatttcgtaatttccctcctcataaaaccta 20845190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 23178426 - 23178512
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  23178426 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 23178512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 23180087 - 23180173
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  23180087 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 23180173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 23184355 - 23184441
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  23184355 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 23184441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 34757349 - 34757435
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  34757349 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 34757435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 39874183 - 39874269
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  39874183 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 39874269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 23178684 - 23178770
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  23178684 ccctccatcaaaacctaactatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 23178770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 32672000 - 32672086
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  32672000 ccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaactatgatttcctaacttcactcctcctaaaaccta 32672086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 23179360 - 23179424
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttc 270  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  23179360 catgatttcctaatttccctcttcctaaaacctaattctcctccttcaaaacctaaccatatttc 23179424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 3611899 - 3611844
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  3611899 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 3611844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 20109185 - 20109130
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20109185 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 20109953 - 20109898
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  20109953 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 30094422 - 30094369
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaacc 297  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  30094422 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 30094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 3611825 - 3611787
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3611825 aaccatatttcctaattcccctcctccaaaccctaacca 3611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 30094345 - 30094310
Alignment:
Q  263 catatttcctaattcacctcctccaaaccctaacca 298  Q
    ||||||||||||||| ||||||||||||||||||||    
T  30094345 catatttcctaattcccctcctccaaaccctaacca 30094310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 20109111 - 20109073
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  20109111 aaccatattttctaattcccctcctccaaaccctaacca 20109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 20109746 - 20109708
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  20109746 aaccatattttctaattcccctcctccaaaccctaacca 20109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 20109879 - 20109841
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  20109879 aaccatattttctaattcccctcctccaaaccctaacca 20109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 20844517 - 20844550
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  20844517 catgatttcctaatttccctcctcctaaaaccta 20844550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 32672902 - 32672935
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  32672902 catgatttcctaatttccctcctcctaaaaccta 32672935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 109; Significance: 8e-55; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 41251 - 41375
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  41251 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttc 41350  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  41351 ctaatttccctcctcctaaaaccta 41375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 41342 - 41466
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  41342 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttc 41441  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| | |||||||||||||||    
T  41442 ctaatttccatcctcctaaaaccta 41466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 41198 - 41284
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41198 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 41284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 40836 - 40922
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |   ||||||||||||||||    
T  40836 ccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaactccactcctcctaaaaccta 40922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 8e-55; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 206 - 326
Target Start/End: Original strand, 18199363 - 18199483
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18199363 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 18199462  T
Q  306 ctaattttcctcctcctaaaa 326  Q
     ||||||||||||||||||||    
T  18199463 ttaattttcctcctcctaaaa 18199483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 36093989 - 36093865
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  36093989 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttc 36093890  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  36093889 ctaatttccctcctcctaaaaccta 36093865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 26949059 - 26949183
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||    
T  26949059 catgattttctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaactcccctcctccaaactctaaccatgatttc 26949158  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||| ||||||||||||    
T  26949159 ctaatttccctcttcctaaaaccta 26949183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 6953369 - 6953283
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6953369 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 6953283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 18199310 - 18199396
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18199310 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 18199396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 36094042 - 36093956
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36094042 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 36093956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 36948081 - 36947998
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36948081 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 36947998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 36947942 - 36947859
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36947942 ccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaac 36947859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 855083 - 855169
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||    
T  855083 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaactatgatttcctaatttccctcctcctaaaaccta 855169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 6953508 - 6953422
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6953508 ccctcccttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 6953422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 6953890 - 6953808
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaa 326  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  6953890 ccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaa 6953808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 26943661 - 26943747
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  26943661 ccctccttcaaaacctaaccatatttactaattcccctcctccaaaccctaaccatgatttcttaatttccctcctcctaaaaccta 26943747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 31483612 - 31483698
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  31483612 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 31483698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 35713152 - 35713238
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  35713152 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 35713238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 36947803 - 36947721
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaa 326  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||||||||    
T  36947803 ccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaa 36947721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 47724563 - 47724649
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  47724563 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 47724649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 6953751 - 6953665
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||  |||||||||    
T  6953751 ccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctgttaaaaccta 6953665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 18199219 - 18199133
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  18199219 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 18199133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 36094233 - 36094147
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  36094233 ccctccttcaaaacctaacaatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctcttcctaaaaccta 36094147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 49566071 - 49565985
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  49566071 ccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 49565985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 1883419 - 1883333
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  1883419 ccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaactatgatttcctaacttcactcctcctaaaaccta 1883333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 11823965 - 11824051
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||  |||||| |||||||||    
T  11823965 ccctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgatttcctaacttcactcctcataaaaccta 11824051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 18256852 - 18256766
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||  ||||||||||||||||    
T  18256852 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaactatgattttctaacttcactcctcctaaaaccta 18256766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 26943947 - 26944033
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  26943947 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 26944033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 38662227 - 38662133
Alignment:
Q  236 cctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |||| ||  ||||||||||||||||    
T  38662227 cctaattcccctcctccaaaacctaaccatatttcctaattcccctcctccaaaccataacaatgattttctaacttcactcctcctaaaaccta 38662133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 43509778 - 43509692
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||| ||  ||||||||||||||||    
T  43509778 ccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccccaaccatgatttcctaacttcactcctcctaaaaccta 43509692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 36947664 - 36947581
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||  |||||| ||||||||||||||    
T  36947664 ccctccttcaaaacctaaccatatttccaaattcccctcctccaaaccctaactatgattttttaatttccctcctcctaaaac 36947581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 36094990 - 36094904
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| |||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  36094990 ccctccatcaaaacctaactatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 36094904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 26943714 - 26943778
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttc 270  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26943714 catgatttcttaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttc 26943778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 36091084 - 36091001
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    ||||||||||||||||||||||||| |||| |||  |||||||||||||||||||||||||||||| ||  |||||||||||||    
T  36091084 ccctccttcaaaacctaaccatattccctagttcctctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaac 36091001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 52419599 - 52419528
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcc 315  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||||||||||    
T  52419599 ccctccttcaaaacctaaccatattttctaattccccttctccaaatcctaaccatgatttcctaattttcc 52419528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 264 - 330
Target Start/End: Complemental strand, 6953627 - 6953561
Alignment:
Q  264 atatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  6953627 atatttcctaattcccctcctccaaaccctaaccatgattttctaatttccctcctcctaaaaccta 6953561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 26943036 - 26943122
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||| |||| ||  ||||||||||| ||||    
T  26943036 ccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgattttctaacttcactcctcctaaagccta 26943122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 33006132 - 33006047
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||| ||  ||||||| ||||||||    
T  33006132 ccctccttcaaaacctaacc-tatttcctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctccgaaaaccta 33006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 35860608 - 35860522
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||| ||||||||||||||||||||||||  | |||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  35860608 ccctcctttaaaacctaaccatatttcctaatttccttcctccaaacgctaaccatgatttcctaacttcactcctcctaaaaccta 35860522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 36095205 - 36095119
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||| ||||||||||||||||||||||||  | |||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  36095205 ccctcctttaaaacctaaccatatttcctaatttccttcctccaaacgctaaccatgatttcctaacttcactcctcctaaaaccta 36095119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 854955 - 855020
Alignment:
Q  265 tatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  854955 tattttctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 855020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 270
Target Start/End: Complemental strand, 36094180 - 36094116
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttc 270  Q
    ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  36094180 catgatttcctaatttccctcttcctaaaacctaattctcctccttcaaaacctaaccatatttc 36094116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 246 - 321
Target Start/End: Complemental strand, 38662251 - 38662177
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcc 321  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||  ||||||||    
T  38662251 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaacctaaccat-atttcctaattcccctcctcc 38662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 851263 - 851349
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||  ||||||| |||||||||||| |||||||| |||| |||| ||  ||||||||||||||||    
T  851263 ccctccttcaaaacctaaccatattctctaattcccctcctccaaactctaaccataatttgctaacttcactcctcctaaaaccta 851349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 13458680 - 13458625
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  13458680 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 13458625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 17657186 - 17657241
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  17657186 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 17657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 18256731 - 18256681
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaacccta 294  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18256731 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 18256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 16647464 - 16647517
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaacc 297  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  16647464 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 16647517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 26949027 - 26949092
Alignment:
Q  265 tatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| |||||| | |||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  26949027 tatttcataattcccatcctccaaaccctaaccatgattttctaatttccctcctcctaaaaccta 26949092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 4585544 - 4585599
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  4585544 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 4585599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 12257894 - 12257949
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  12257894 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 12257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 4585618 - 4585656
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4585618 aaccatatttcctaattcccctcctccaaaccctaacca 4585656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 12257968 - 12258006
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  12257968 aaccatatttcctaattcccctcctccaaaccctaacca 12258006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 13458606 - 13458568
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13458606 aaccatatttcctaattcccctcctccaaaccctaacca 13458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 263 - 298
Target Start/End: Original strand, 16647541 - 16647576
Alignment:
Q  263 catatttcctaattcacctcctccaaaccctaacca 298  Q
    ||||||||||||||| ||||||||||||||||||||    
T  16647541 catatttcctaattcccctcctccaaaccctaacca 16647576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 854987 - 855020
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  854987 catgatttcctaatttccctcctcctaaaaccta 855020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 6953316 - 6953283
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  6953316 catgatttcctaatttccctcctcctaaaaccta 6953283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 6953455 - 6953422
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  6953455 catgatttcctaatttccctcctcctaaaaccta 6953422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 207 - 239
Target Start/End: Original strand, 855137 - 855169
Alignment:
Q  207 atgatttcctaatttccctcctcctaagaccta 239  Q
    ||||||||||||||||||||||||||| |||||    
T  855137 atgatttcctaatttccctcctcctaaaaccta 855169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 8e-55; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 13905817 - 13905941
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  13905817 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttc 13905916  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  13905917 ctaatttccctcctcctaaaaccta 13905941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 26453454 - 26453578
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  26453454 catgatttcctaatttccctcctcttaaaacctaattcccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 26453553  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  26453554 ctaatttccctcctcctaaaaccta 26453578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 40603290 - 40603413
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40603290 catgatttcctaatttccctcctcttaaaacctaattccc-tcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 40603388  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  40603389 ctaatttccctcctcctaaaaccta 40603413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 13905764 - 13905850
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13905764 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 13905850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 13899866 - 13899952
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13899866 ccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 13899952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 35433217 - 35433131
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  35433217 ccctccttcaaaacctaaccatatttcttaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 35433131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 26453403 - 26453487
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  26453403 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 26453487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 40603239 - 40603323
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  40603239 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 40603323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 1925721 - 1925635
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  1925721 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccattatttcctaatttccctcctcctaaaaccta 1925635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 19640917 - 19641003
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  19640917 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 19641003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 19839510 - 19839596
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  19839510 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 19839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 32287283 - 32287369
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  32287283 ccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcctaaaaccta 32287369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 32287422 - 32287505
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  32287422 ccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcctaaaac 32287505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 5001196 - 5001110
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  5001196 ccctccttcaaaacctaaccttatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 5001110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 5012866 - 5012780
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  5012866 ccctccttcaaaacctaaccttatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 5012780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 26452906 - 26452992
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  26452906 ccctccttcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 26452992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 36440179 - 36440093
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  36440179 ccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 36440093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 180217 - 180303
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  180217 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 180303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 980099 - 980013
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  980099 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 980013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 980552 - 980466
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  980552 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 980466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 1501801 - 1501887
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||| ||  ||||||||||||||||    
T  1501801 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacaatgattttctaacttcactcctcctaaaaccta 1501887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 2444130 - 2444216
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  2444130 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 2444216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 13899107 - 13899193
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  13899107 ccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 13899193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 42111744 - 42111658
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  42111744 ccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctcctaaaaccta 42111658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 204371 - 204436
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaa 309  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  204371 ccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaa 204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 270
Target Start/End: Original strand, 13899919 - 13899983
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttc 270  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13899919 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttc 13899983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 14039724 - 14039810
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  14039724 ccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaacaatgatttcctaacttcactcctcctaaaaccta 14039810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 19641079 - 19641165
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||  |||||| |||||||||    
T  19641079 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctcataaaaccta 19641165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 19839672 - 19839758
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||| ||  |||||| |||||||||    
T  19839672 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaacttcactcctcataaaaccta 19839758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 27999732 - 27999646
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||| |||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  27999732 ccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaaccta 27999646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 28090466 - 28090380
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||| |||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  28090466 ccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaaccta 28090380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 28096789 - 28096703
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||| |||||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||| ||||||||||||    
T  28096789 ccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctcatcctaaaaccta 28096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 40602742 - 40602828
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  40602742 ccctccttcaaaatctaaccatattttctaatttccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 40602828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 21591260 - 21591174
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||  ||||||| |||||| |||| ||||||||||||||||||| ||  ||||||||||||||||    
T  21591260 ccctccttcaaaacctaaccatattctctaattcccctccttcaaagcctaaccatgatttcctaacttcactcctcctaaaaccta 21591174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 32287019 - 32287105
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||| |||||||||| | ||||||| ||||  ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  32287019 ccctcctttaaaacctaactacatttcctgattcctctcctccaaaccctaaccatgattttctaatttccctcctcctaaaaccta 32287105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 35433068 - 35433010
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgat 302  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  35433068 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgat 35433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 302
Target Start/End: Complemental strand, 1925570 - 1925514
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgat 302  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  1925570 ctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgat 1925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 32287143 - 32287206
Alignment:
Q  264 atatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    |||||| ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  32287143 atattttctaattcccctcctccaaaccttaaccatgatttcctaatttccctcctcctaaaac 32287206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 260 - 330
Target Start/End: Complemental strand, 980331 - 980261
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  980331 aaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 980261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 2296987 - 2297042
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  2296987 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 2297042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 25643748 - 25643803
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  25643748 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 25643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 6120848 - 6120903
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||| ||||||| ||||||||||||| |||||||    
T  6120848 ccctcctttaaaacctaaccatattttctaattctcctcctccaaaccttaaccat 6120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 2297061 - 2297099
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  2297061 aaccatatttcctaattcccctcctccaaaccctaacca 2297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 6120922 - 6120960
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6120922 aaccatatttcctaattcccctcctccaaaccctaacca 6120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 25643822 - 25643860
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  25643822 aaccatatttcctaattcccctcctccaaaccctaacca 25643860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 13900066 - 13900121
Alignment:
Q  247 tccttcaaaacctaaccatatttcctaatt---cacctcctccaaaccctaaccat 299  Q
    ||||| ||||||||||||||||||||||||   | |||||||||||||||||||||    
T  13900066 tcctttaaaacctaaccatatttcctaattctcctcctcctccaaaccctaaccat 13900121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 13900140 - 13900178
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  13900140 aaccatattttctaattcccctcctccaaaccctaacca 13900178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 27999683 - 27999646
Alignment:
Q  202 taatcatgatttcctaatttccctcctcctaagaccta 239  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  27999683 taatcatgatttcctaatttccctcatcctaaaaccta 27999646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 28090417 - 28090380
Alignment:
Q  202 taatcatgatttcctaatttccctcctcctaagaccta 239  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  28090417 taatcatgatttcctaatttccctcatcctaaaaccta 28090380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 28096740 - 28096703
Alignment:
Q  202 taatcatgatttcctaatttccctcctcctaagaccta 239  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  28096740 taatcatgatttcctaatttccctcatcctaaaaccta 28096703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 35433164 - 35433131
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  35433164 catgatttcctaatttccctcctcctaaaaccta 35433131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 2e-52; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 2052090 - 2051966
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2052090 catgatttcctaatttccctcctcttaaaacctaattcccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttc 2051991  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    ||||||| |||||||||||||||||    
T  2051990 ctaatttccctcctcctaaaaccta 2051966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 206 - 330
Target Start/End: Complemental strand, 35598181 - 35598057
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttc 305  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||    
T  35598181 catgatttcctaatttccctcctactaaaacctaattcccctccttcaaaacctaagcatgtttcctaatttccctcctccaaaccctaaccatgatttc 35598082  T
Q  306 ctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||    
T  35598081 ctaattttcctcctcctaaaaccta 35598057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 39514232 - 39514136
Alignment:
Q  206 catgatttcctaatttccctcctcctaagacctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgat 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39514232 catgatttcctaatttccctcctcctaaaacctaattcccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 39514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 39514285 - 39514199
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39514285 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 39514199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 45507332 - 45507246
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45507332 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 45507246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 330
Target Start/End: Complemental strand, 35597773 - 35597680
Alignment:
Q  236 cctaattcccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  35597773 cctaattcccctcctccaaaccctaaccatatttcctaattc-cctcctccaaatcctaaccatgatttcctaattttcctcctcctaaaaccta 35597680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 35598234 - 35598148
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  35598234 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctactaaaaccta 35598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 246 - 330
Target Start/End: Complemental strand, 2052141 - 2052057
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  2052141 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcttaaaaccta 2052057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22194886 - 22194972
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  22194886 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 22194972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 22195056 - 22195142
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  22195056 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 22195142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 36455233 - 36455319
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  36455233 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 36455319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 48647762 - 48647848
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  48647762 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 48647848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 45507476 - 45507395
Alignment:
Q  249 cttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45507476 cttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 45507395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 246 - 330
Target Start/End: Original strand, 15689400 - 15689484
Alignment:
Q  246 ctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  15689400 ctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 15689484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 15689236 - 15689322
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  15689236 ccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctcctaaaaccta 15689322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 48958576 - 48958662
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  48958576 ccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 48958662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 49791690 - 49791604
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  49791690 ccctccttcaaaacctaacgatatttcctaattcctctcttccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 49791604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 50704597 - 50704683
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  50704597 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaacttcactcctcctaaaaccta 50704683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 2585426 - 2585512
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||  ||||||||||||||||    
T  2585426 ccctccttcaaaacctaaccatattccctaattcccctcctctaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 2585512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 7476035 - 7476121
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  7476035 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 7476121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 7476596 - 7476682
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  7476596 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 7476682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 9530062 - 9530148
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  9530062 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 9530148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 42492481 - 42492567
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  42492481 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 42492567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 45507151 - 45507065
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  45507151 ccctccttcaaaacctaaccatattccctaattcccttcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 45507065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 49791966 - 49791883
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaac 327  Q
    ||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||| ||||||| ||||||||||||||    
T  49791966 ccctccttcaaaacctaacgatatttcctaattcctctcttccaaaccctaaccatgattttctaatttccctcctcctaaaac 49791883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 2052638 - 2052552
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  2052638 ccctccttcaaaacctaaccatattttctaatttccctcctccaaaccctaaccataatttcctaacttcactcctcctaaaaccta 2052552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 13929209 - 13929123
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||  ||| ||||||||||||    
T  13929209 ccctccttcaaaacctaaccatattaccaaattcccctcctccaaaccctaaccatgatttcctaacttcactcatcctaaaaccta 13929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 35597799 - 35597733
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaatt 311  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  35597799 ccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccat-atttcctaatt 35597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 2051832 - 2051777
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2051832 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 2051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 36871092 - 36871037
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  36871092 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 36871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 49791134 - 49791079
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  49791134 ccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 49791511 - 49791456
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||||||| |||||||    
T  49791511 ccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 49791060 - 49791022
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  49791060 aaccatatttcctaattcccctcctccaaaccctaacca 49791022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 49791437 - 49791399
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  49791437 aaccatatttcctaattcccctcctccaaaccctaacca 49791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 45507279 - 45507246
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  45507279 catgatttcctaatttccctcctcctaaaaccta 45507246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 45507428 - 45507395
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  45507428 catgatttcctaatttccctcctcctaaaaccta 45507395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Complemental strand, 49791637 - 49791604
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  49791637 catgatttcctaatttccctcctcctaaaaccta 49791604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 75; Significance: 2e-34; HSPs: 5)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 36090 - 36176
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36090 ccctccttcaaaacctaaccatatttcctaattcccatcctccaaaccctaaccatgatttcctaatttccctcctcctaaaaccta 36176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 36239 - 36324
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  36239 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaa-cctaaccatgatttcctaatttccctcctcctaaaaccta 36324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 36387 - 36445
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgat 302  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  36387 ccctccttcaaaacctaaccatatatcctaattcccctcctccaaaccctaaccatgat 36445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 36143 - 36176
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  36143 catgatttcctaatttccctcctcctaaaaccta 36176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 36291 - 36324
Alignment:
Q  206 catgatttcctaatttccctcctcctaagaccta 239  Q
    |||||||||||||||||||||||||||| |||||    
T  36291 catgatttcctaatttccctcctcctaaaaccta 36324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 2e-34; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 3589257 - 3589339
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaa 326  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3589257 ccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaa 3589339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 2271863 - 2271949
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  2271863 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 2271949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 24456440 - 24456526
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||  ||||||||||||||||    
T  24456440 ccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaacttcactcctcctaaaaccta 24456526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 29371762 - 29371676
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  29371762 ccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 29371676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 29374314 - 29374228
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||| ||  ||||||||||||||||    
T  29374314 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcgtttcctaacttcactcctcctaaaaccta 29374228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 33049796 - 33049710
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  33049796 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 33049710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 33007360 - 33007275
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||| ||  ||||||||||||||||    
T  33007360 ccctccttcaaaacctaaccatatttcctaattcccctcct-caaaccctagccatgatttcctaacttaactcctcctaaaaccta 33007275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 299
Target Start/End: Original strand, 29921038 - 29921092
Alignment:
Q  245 cctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||  |||||||||||||||||||||||| |||||||||||||||||||||    
T  29921038 cctcctttgaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 29921092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 4e-32; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 22732285 - 22732199
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  22732285 ccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttcctaatttcactcctcctaaaaccta 22732199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 18489942 - 18490028
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  18489942 ccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 18490028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 19958080 - 19958166
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||  ||||||||||||||||    
T  19958080 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaacttcactcctcctaaaaccta 19958166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 24014191 - 24014105
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||    
T  24014191 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaacttcactcctcctaaaaccta 24014105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 37985521 - 37985435
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  37985521 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 37985435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 21637073 - 21637159
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  21637073 ccctccttcaaaacctaaccatattccctaattcctctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 21637159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 24011287 - 24011201
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  24011287 ccctccttcaaaatctaaccatatttcataattctcctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 24011201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 330
Target Start/End: Complemental strand, 41377874 - 41377801
Alignment:
Q  257 cctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||||||||    
T  41377874 cctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaacttcactcctcctaaaaccta 41377801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 244 - 298
Target Start/End: Complemental strand, 18278606 - 18278552
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18278606 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacca 18278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 296
Target Start/End: Complemental strand, 18489846 - 18489794
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaac 296  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  18489846 ccctccttcaaaacataaccatatttcctaattcccctcctccaaaccctaac 18489794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 410153 - 410098
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  410153 ccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 410079 - 410041
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  410079 aaccatatttcctaattcccctcctccaaaccctaacca 410041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 277
Target Start/End: Complemental strand, 37985623 - 37985590
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattc 277  Q
    ||||||||||||||||||| ||||||||||||||    
T  37985623 ccctccttcaaaacctaacaatatttcctaattc 37985590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 2553 - 2467
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  || |||||||||||||    
T  2553 ccctccttcaaaacctaaccatatttcctaattcccctcctctaaaccctaaccatgatttcctaacttcacttctcctaaaaccta 2467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 244 - 330
Target Start/End: Complemental strand, 44709 - 44623
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccatgatttcctaattttcctcctcctaaaaccta 330  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||  |||| |||||||||||    
T  44709 ccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaacttcactccccctaaaaccta 44623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 314 - 369
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  314 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0642; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 388 - 426
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  388 aaccatatttcctaattcccctcctccaaaccctaacca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 162 - 107
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  162 ccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 107  T

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Target: scaffold0374; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 88 - 50
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  88 aaccatatttcctaattcccctcctccaaaccctaacca 50  T

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Target: scaffold0345 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Original strand, 10225 - 10280
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  10225 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 10280  T

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Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Original strand, 10299 - 10337
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  10299 aaccatatttcctaattcccctcctccaaaccctaacca 10337  T

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Target: scaffold0105 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 28755 - 28700
Alignment:
Q  244 ccctccttcaaaacctaaccatatttcctaattcacctcctccaaaccctaaccat 299  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  28755 ccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 28700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 260 - 298
Target Start/End: Complemental strand, 28681 - 28643
Alignment:
Q  260 aaccatatttcctaattcacctcctccaaaccctaacca 298  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  28681 aaccatatttcctaattcccctcctccaaaccctaacca 28643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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