View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_176 (Length: 310)
Name: NF10829A_low_176
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_176 |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 3 - 303
Target Start/End: Original strand, 22443293 - 22443590
Alignment:
| Q |
3 |
attatataatagacgatcataatttataagaaaatacttatgggtttatcaaaactgatagaatatctgcatataacattatatgttctagtctatgata |
102 |
Q |
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| T |
22443293 |
attatataatagacgatcataatttataagaaaatacttatgggtttatcaaaactgatagaatatctgcatataacattatatattctagtctatgata |
22443392 |
T |
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| Q |
103 |
ggatatcagcaaaagtgtcttcggaagaacttaaaataaaaacattgttagtatcctacaagtatctcaatatagaaaagtatctgtgcgttattgggaa |
202 |
Q |
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| T |
22443393 |
ggatatcagcaaaagtgtcttcggaa---cttaaaaaaaaaacattgttagtatcctacaagtatctcaatatagaaaagtatctgtgcgttattgggaa |
22443489 |
T |
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| Q |
203 |
gtacttgcaaattatcataataataattcgtaaaataaaatatatttgggtacttttgggacgcatatccagggagtgccagtgtcctatattcttcgac |
302 |
Q |
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| T |
22443490 |
gtacttgcaaattatcataataataattcgtaaaataaaatatatttgggtacttttgggacgcatatccagggagtgccagtgtcctatatggttcgac |
22443589 |
T |
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