View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_178 (Length: 309)
Name: NF10829A_low_178
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_178 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 7 - 308
Target Start/End: Complemental strand, 7228707 - 7228406
Alignment:
| Q |
7 |
ttattttcatccctaaagaaagatttaggtaaatattcataaaagtatatgttctggttgaattggtactattatccaaaatggattatttattgtatga |
106 |
Q |
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| T |
7228707 |
ttattttcatccctaaagaaagatttaggtaaatattcataaaagtatctgttctggttgaattggtactattatccaaaatggattatttattgtatga |
7228608 |
T |
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| Q |
107 |
aacttatatttataccactagcttgtataaccagcaacagatgatgaactacctcaaattactaacctagcacgacgggtgagaaattaaaaatttgagt |
206 |
Q |
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| T |
7228607 |
aacttatatttataccactagcttgtataaccagcaacagatgatgaactaccccaaattactaacctagcacgacgggtgagaaattaaaaatttgagt |
7228508 |
T |
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| Q |
207 |
tctaaattcttatgggtaggtgtagttactctcttgaaattacttatactatttcaatagaaatgaccaaattcacctcgccaagagacatgacatagca |
306 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7228507 |
tctaaattcttatgggtaggtgtagttactctcttgaaattacttatactatttcaatagaaatgaccaaattcacctcgccaagagacatgacatagca |
7228408 |
T |
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| Q |
307 |
at |
308 |
Q |
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|| |
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| T |
7228407 |
at |
7228406 |
T |
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