View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_247 (Length: 266)
Name: NF10829A_low_247
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_247 |
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Alignment Details
Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 36701802 - 36702029
Alignment:
| Q |
17 |
aactatttgtcctgttaaccaaagaaacgcgacactgtttggtaagcatgtgcatgcctcaactataaagtttcattcatgcaaatatattgttcttata |
116 |
Q |
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| T |
36701802 |
aactatttgtcctgttaaccaaagaaacgcgacactgtttggtaagcatgtgcatgcctcaactataaagtttcattcatgcaaatatattgttcttata |
36701901 |
T |
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| Q |
117 |
aattgtatttatacatgaggcagtggcaaaaggaataataattatgaacgtaaagaaatatgatgtgatgatgagtagtgttccacaaactgcaagttcc |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36701902 |
aattgtatttatacatgaggcagtggcaaaaggaataataattatgaacgtaaagaaatatgatgtgatgatgagtagtgttccacaaactgcaagttcc |
36702001 |
T |
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| Q |
217 |
cctcctactcttccacatatgtattcag |
244 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
36702002 |
cctcctactcttccacatatgtattcag |
36702029 |
T |
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