View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_257 (Length: 259)
Name: NF10829A_low_257
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_257 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 5 - 253
Target Start/End: Original strand, 43953608 - 43953856
Alignment:
| Q |
5 |
ccaagaatatggtcaagcctgagtgtggtttaatggcagcggctactaaacaagtgccaagagaaattcatggacggactaacttaagtcaaattgtgtt |
104 |
Q |
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| T |
43953608 |
ccaagaatatggtcaagcctgaatgtggtttaatggcggcggctactaaacaagtgccaagagaaattcatggacggactaacttaagtcaaattgtgtt |
43953707 |
T |
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| Q |
105 |
ggacacaaacaagtgcatattcggatggatccaatgagacatatctatccaacaaaaggtggtggttaataaacaagtaccattataattgcccatgctg |
204 |
Q |
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| T |
43953708 |
ggacacaaacaagtgcatattcggatggatccaatgagacatatctatccaacaaaaggtggtggttaataaacaagtaccattataattgcccatgctg |
43953807 |
T |
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| Q |
205 |
ttggcaaaaaggcaaggagactagcaaagatgtctccaacagtgaggct |
253 |
Q |
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| T |
43953808 |
ttggcaaaaaggcaaggagactagcaaagatgtctccaacagtgaggct |
43953856 |
T |
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