View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_289 (Length: 251)
Name: NF10829A_low_289
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_289 |
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Alignment Details
Target: chr5 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 41256026 - 41256259
Alignment:
| Q |
1 |
tcagattgcttttaaatgtgcatcaaatcctgcagatatggttcttgatgcacttgatggtgtttttggtgcaaatgcagtggttgatggaaaggaatta |
100 |
Q |
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| T |
41256026 |
tcagattgcttttaaatgtgcatcaaatcctgcagatatggttcttgatgcacttgatggtgtttttggtgcaaatgcagtggttgatggaaaggaatta |
41256125 |
T |
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| Q |
101 |
cctcgtttgaataagagaagttgtaattttttgtttcagcagttgagggttttttctccttatgttagttttgatgttaggaagaaagctaagagattgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41256126 |
cctcgtttgaataagagaagttgtaattttttgtttcagcagttgagggttttttctccttatgttagttttgatgttaggaagaaagctaagagattgt |
41256225 |
T |
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| Q |
201 |
ttagtctgtggaaggttaacttggtgaatgatgt |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
41256226 |
ttagtctgtggaaggttaacttggtgaatgatgt |
41256259 |
T |
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