View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10829A_low_297 (Length: 250)

Name: NF10829A_low_297
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10829A_low_297
NF10829A_low_297
[»] chr8 (51 HSPs)
chr8 (15-218)||(22504279-22504482)
chr8 (167-208)||(37141378-37141419)
chr8 (166-218)||(41324134-41324186)
chr8 (167-205)||(8717477-8717515)
chr8 (169-207)||(14279571-14279609)
chr8 (167-208)||(6109190-6109231)
chr8 (168-205)||(24838172-24838209)
chr8 (168-205)||(26799206-26799243)
chr8 (170-207)||(30694439-30694476)
chr8 (168-204)||(12714373-12714409)
chr8 (161-205)||(20665365-20665409)
chr8 (161-205)||(30550728-30550772)
chr8 (172-208)||(39138997-39139033)
chr8 (161-205)||(44215477-44215521)
chr8 (170-205)||(13124365-13124400)
chr8 (170-205)||(24023417-24023452)
chr8 (166-205)||(32051534-32051573)
chr8 (169-208)||(33996092-33996131)
chr8 (167-201)||(4830029-4830063)
chr8 (168-206)||(5179815-5179853)
chr8 (167-205)||(8137956-8137994)
chr8 (172-218)||(8544588-8544634)
chr8 (167-205)||(12748922-12748960)
chr8 (168-210)||(20275186-20275228)
chr8 (168-210)||(21061813-21061855)
chr8 (167-205)||(23159462-23159500)
chr8 (167-201)||(24429820-24429854)
chr8 (170-208)||(26196603-26196641)
chr8 (167-205)||(32115408-32115446)
chr8 (167-201)||(32192915-32192949)
chr8 (168-206)||(33743597-33743635)
chr8 (167-205)||(34420864-34420902)
chr8 (168-210)||(40400003-40400045)
chr8 (167-205)||(45049596-45049634)
chr8 (161-205)||(3672618-3672663)
chr8 (168-205)||(7869643-7869680)
chr8 (168-205)||(8461838-8461875)
chr8 (167-208)||(27718893-27718934)
chr8 (172-205)||(41860453-41860486)
chr8 (169-205)||(4077712-4077748)
chr8 (169-201)||(7679925-7679957)
chr8 (168-208)||(17641859-17641899)
chr8 (172-212)||(25277211-25277251)
chr8 (177-205)||(26932867-26932895)
chr8 (172-204)||(28580970-28581002)
chr8 (170-210)||(29924914-29924954)
chr8 (161-205)||(30429239-30429283)
chr8 (170-206)||(32285760-32285796)
chr8 (170-210)||(33105415-33105455)
chr8 (169-201)||(39076543-39076575)
chr8 (169-201)||(39077029-39077061)
[»] chr7 (50 HSPs)
chr7 (168-218)||(48103663-48103713)
chr7 (169-217)||(5963817-5963865)
chr7 (166-205)||(6023329-6023368)
chr7 (167-205)||(4905297-4905335)
chr7 (167-205)||(19416535-19416573)
chr7 (168-217)||(44406846-44406895)
chr7 (166-218)||(19626514-19626566)
chr7 (161-205)||(20763169-20763213)
chr7 (161-205)||(29488735-29488779)
chr7 (161-205)||(33232399-33232443)
chr7 (161-205)||(34284541-34284585)
chr7 (166-218)||(46737805-46737857)
chr7 (167-203)||(47342698-47342734)
chr7 (166-205)||(10026014-10026053)
chr7 (167-210)||(14623482-14623525)
chr7 (168-207)||(35224140-35224179)
chr7 (161-208)||(36755029-36755076)
chr7 (161-208)||(36760826-36760873)
chr7 (166-205)||(40808161-40808200)
chr7 (170-205)||(47677579-47677614)
chr7 (170-204)||(1079695-1079729)
chr7 (167-205)||(6781828-6781866)
chr7 (167-201)||(7908614-7908648)
chr7 (167-201)||(8084448-8084482)
chr7 (167-205)||(10244748-10244786)
chr7 (167-205)||(18773758-18773796)
chr7 (167-205)||(19599166-19599204)
chr7 (167-205)||(27462438-27462476)
chr7 (168-210)||(42753524-42753566)
chr7 (166-208)||(47342433-47342475)
chr7 (168-205)||(18714470-18714507)
chr7 (169-214)||(19578130-19578175)
chr7 (167-200)||(30397090-30397123)
chr7 (173-218)||(36121679-36121724)
chr7 (170-207)||(39280818-39280855)
chr7 (168-205)||(39926540-39926577)
chr7 (161-208)||(3536253-3536301)
chr7 (168-208)||(18023701-18023741)
chr7 (161-205)||(19036104-19036148)
chr7 (169-205)||(20085761-20085797)
chr7 (161-205)||(20718488-20718532)
chr7 (169-209)||(23221415-23221455)
chr7 (170-214)||(24027053-24027096)
chr7 (169-209)||(24483896-24483936)
chr7 (172-204)||(39106666-39106698)
chr7 (168-208)||(42227804-42227844)
chr7 (168-208)||(42829233-42829273)
chr7 (173-205)||(43139292-43139324)
chr7 (170-210)||(44595635-44595675)
chr7 (169-201)||(45425476-45425508)
[»] chr6 (27 HSPs)
chr6 (161-205)||(2681696-2681740)
chr6 (168-217)||(26356071-26356120)
chr6 (161-205)||(33976259-33976303)
chr6 (161-204)||(31895303-31895346)
chr6 (167-205)||(8629698-8629736)
chr6 (169-207)||(19265524-19265562)
chr6 (168-206)||(30579881-30579919)
chr6 (168-205)||(12735245-12735282)
chr6 (167-200)||(24269904-24269937)
chr6 (167-208)||(32053809-32053850)
chr6 (161-205)||(247674-247718)
chr6 (159-218)||(8393741-8393800)
chr6 (161-208)||(10018414-10018461)
chr6 (167-214)||(26320557-26320603)
chr6 (167-205)||(8569730-8569768)
chr6 (167-205)||(24623319-24623357)
chr6 (168-205)||(788888-788925)
chr6 (170-207)||(12904317-12904354)
chr6 (168-205)||(33824903-33824940)
chr6 (161-204)||(5937646-5937690)
chr6 (161-205)||(12582231-12582275)
chr6 (172-204)||(21029369-21029401)
chr6 (170-210)||(23635711-23635751)
chr6 (169-205)||(23903309-23903345)
chr6 (170-210)||(26548275-26548315)
chr6 (168-208)||(28231424-28231464)
chr6 (172-208)||(29680614-29680650)
[»] scaffold0021 (1 HSPs)
scaffold0021 (167-205)||(161162-161200)
[»] chr3 (55 HSPs)
chr3 (161-218)||(7202905-7202963)
chr3 (163-217)||(44675767-44675821)
chr3 (169-210)||(7626458-7626499)
chr3 (169-205)||(42886511-42886547)
chr3 (159-205)||(39779036-39779083)
chr3 (166-205)||(48796220-48796259)
chr3 (167-210)||(50037332-50037375)
chr3 (167-205)||(25340926-25340964)
chr3 (168-205)||(8127485-8127522)
chr3 (167-204)||(54018409-54018446)
chr3 (161-205)||(916454-916498)
chr3 (169-205)||(3695684-3695720)
chr3 (168-204)||(10926491-10926527)
chr3 (167-215)||(33745120-33745168)
chr3 (170-218)||(41030189-41030237)
chr3 (172-208)||(42276397-42276433)
chr3 (168-208)||(47536479-47536519)
chr3 (168-203)||(7738691-7738726)
chr3 (166-205)||(32843264-32843303)
chr3 (166-205)||(41817519-41817558)
chr3 (169-208)||(48022313-48022352)
chr3 (173-203)||(17262204-17262234)
chr3 (167-201)||(21331423-21331457)
chr3 (168-210)||(27065729-27065771)
chr3 (167-205)||(29631207-29631245)
chr3 (167-201)||(32629101-32629135)
chr3 (167-205)||(38130961-38130999)
chr3 (167-201)||(44579657-44579691)
chr3 (170-204)||(45334213-45334247)
chr3 (170-208)||(49710744-49710782)
chr3 (167-205)||(53162219-53162257)
chr3 (172-205)||(334849-334882)
chr3 (169-206)||(2078263-2078300)
chr3 (168-201)||(8957966-8957999)
chr3 (167-204)||(19126680-19126717)
chr3 (168-205)||(20018219-20018256)
chr3 (167-204)||(25727970-25728007)
chr3 (167-208)||(30050427-30050468)
chr3 (167-204)||(32037035-32037072)
chr3 (167-204)||(32909304-32909341)
chr3 (168-205)||(34442449-34442486)
chr3 (168-205)||(34899119-34899156)
chr3 (168-205)||(38034811-38034848)
chr3 (168-205)||(44075158-44075195)
chr3 (168-205)||(45431970-45432007)
chr3 (168-201)||(52119398-52119431)
chr3 (168-208)||(8238586-8238626)
chr3 (170-218)||(20612266-20612314)
chr3 (168-208)||(25955292-25955332)
chr3 (170-214)||(28965770-28965814)
chr3 (172-204)||(47099038-47099070)
chr3 (169-205)||(48656901-48656937)
chr3 (169-205)||(48849765-48849801)
chr3 (172-208)||(52337345-52337381)
chr3 (169-209)||(54742278-54742318)
[»] chr1 (52 HSPs)
chr1 (161-218)||(15668512-15668570)
chr1 (161-205)||(23203336-23203381)
chr1 (167-205)||(1605417-1605455)
chr1 (170-208)||(2596939-2596977)
chr1 (170-208)||(5503764-5503802)
chr1 (167-205)||(8736456-8736494)
chr1 (167-205)||(40735007-40735045)
chr1 (167-205)||(48100743-48100781)
chr1 (172-205)||(13778587-13778620)
chr1 (167-208)||(16967193-16967234)
chr1 (168-205)||(27533265-27533302)
chr1 (168-205)||(29739359-29739396)
chr1 (168-208)||(17669667-17669707)
chr1 (166-205)||(13590130-13590169)
chr1 (169-204)||(44678020-44678055)
chr1 (169-207)||(1091202-1091240)
chr1 (167-201)||(2613743-2613777)
chr1 (167-205)||(11181937-11181975)
chr1 (168-218)||(16475644-16475693)
chr1 (167-201)||(16791389-16791423)
chr1 (167-205)||(17917140-17917178)
chr1 (166-204)||(22346696-22346734)
chr1 (166-208)||(23334608-23334650)
chr1 (167-205)||(25532994-25533032)
chr1 (167-205)||(34521192-34521230)
chr1 (167-201)||(42888596-42888630)
chr1 (167-205)||(45190271-45190309)
chr1 (170-208)||(46838977-46839015)
chr1 (167-208)||(48646724-48646766)
chr1 (170-208)||(52262165-52262203)
chr1 (168-205)||(18335821-18335858)
chr1 (167-208)||(36228588-36228629)
chr1 (167-208)||(39387790-39387831)
chr1 (172-205)||(41763157-41763190)
chr1 (168-205)||(47417805-47417842)
chr1 (169-206)||(48898493-48898530)
chr1 (168-205)||(50040378-50040415)
chr1 (167-204)||(52043294-52043331)
chr1 (165-201)||(4715564-4715600)
chr1 (161-204)||(8551430-8551474)
chr1 (169-201)||(11462928-11462960)
chr1 (169-205)||(13401620-13401656)
chr1 (168-208)||(16033449-16033489)
chr1 (172-208)||(16966971-16967007)
chr1 (168-204)||(21341206-21341242)
chr1 (168-204)||(32007600-32007636)
chr1 (167-207)||(38862123-38862163)
chr1 (169-209)||(39252144-39252184)
chr1 (166-218)||(44860872-44860924)
chr1 (168-208)||(45481515-45481555)
chr1 (170-210)||(49222840-49222880)
chr1 (169-205)||(50250302-50250338)
[»] chr5 (35 HSPs)
chr5 (169-210)||(18789059-18789100)
chr5 (170-218)||(43135024-43135072)
chr5 (167-206)||(10704332-10704371)
chr5 (167-201)||(11637578-11637612)
chr5 (170-208)||(27903137-27903175)
chr5 (168-218)||(34191455-34191505)
chr5 (167-205)||(38495163-38495201)
chr5 (161-205)||(5551283-5551328)
chr5 (161-205)||(6345053-6345097)
chr5 (167-203)||(18331728-18331764)
chr5 (161-205)||(37462126-37462170)
chr5 (161-208)||(776695-776742)
chr5 (159-205)||(22522803-22522850)
chr5 (169-208)||(35493972-35494011)
chr5 (168-207)||(39963515-39963554)
chr5 (171-214)||(41117855-41117898)
chr5 (166-208)||(2839818-2839860)
chr5 (167-205)||(14861949-14861987)
chr5 (168-218)||(35270670-35270720)
chr5 (167-205)||(40715951-40715989)
chr5 (168-214)||(41630105-41630151)
chr5 (166-204)||(42613207-42613245)
chr5 (161-218)||(133554-133611)
chr5 (172-205)||(12670076-12670109)
chr5 (167-204)||(17708095-17708132)
chr5 (166-207)||(20688060-20688101)
chr5 (168-205)||(32234784-32234820)
chr5 (161-205)||(5015295-5015339)
chr5 (167-203)||(16076452-16076488)
chr5 (168-208)||(20125048-20125087)
chr5 (169-201)||(20175850-20175882)
chr5 (172-208)||(21354316-21354352)
chr5 (161-205)||(26166754-26166798)
chr5 (172-204)||(27679524-27679556)
chr5 (168-208)||(37054268-37054308)
[»] chr2 (45 HSPs)
chr2 (161-217)||(4833252-4833309)
chr2 (169-218)||(11551191-11551240)
chr2 (161-218)||(22709099-22709157)
chr2 (167-201)||(24305311-24305345)
chr2 (167-208)||(14735892-14735933)
chr2 (161-205)||(3708708-3708752)
chr2 (161-205)||(11868664-11868708)
chr2 (168-204)||(20120724-20120760)
chr2 (169-205)||(20990906-20990942)
chr2 (161-205)||(21929485-21929529)
chr2 (161-205)||(35360057-35360101)
chr2 (168-204)||(36474784-36474820)
chr2 (169-205)||(41356175-41356211)
chr2 (166-218)||(42791315-42791367)
chr2 (175-218)||(10811097-10811140)
chr2 (170-205)||(12751281-12751316)
chr2 (170-201)||(16221352-16221383)
chr2 (167-210)||(25186239-25186282)
chr2 (166-205)||(36359334-36359373)
chr2 (167-205)||(8091160-8091198)
chr2 (167-205)||(9547411-9547449)
chr2 (168-214)||(9842196-9842241)
chr2 (170-208)||(19159965-19160003)
chr2 (167-205)||(19189846-19189884)
chr2 (174-208)||(34376914-34376948)
chr2 (168-214)||(35194273-35194319)
chr2 (167-205)||(41859873-41859911)
chr2 (172-205)||(4180723-4180756)
chr2 (167-208)||(4238780-4238821)
chr2 (172-205)||(5168581-5168614)
chr2 (168-205)||(11560520-11560557)
chr2 (168-205)||(17328008-17328045)
chr2 (168-205)||(20565077-20565114)
chr2 (166-207)||(24579668-24579709)
chr2 (168-205)||(27017512-27017549)
chr2 (168-205)||(29544649-29544686)
chr2 (168-205)||(31815889-31815926)
chr2 (170-207)||(33866912-33866949)
chr2 (168-204)||(3113730-3113766)
chr2 (170-206)||(23468045-23468081)
chr2 (168-208)||(26400773-26400813)
chr2 (172-204)||(28874555-28874587)
chr2 (169-205)||(30243273-30243309)
chr2 (168-208)||(42347690-42347730)
chr2 (169-205)||(44694711-44694747)
[»] chr4 (54 HSPs)
chr4 (167-207)||(16584949-16584989)
chr4 (168-216)||(25783440-25783488)
chr4 (167-210)||(28435245-28435288)
chr4 (166-209)||(30847980-30848023)
chr4 (167-205)||(9946448-9946486)
chr4 (167-205)||(22040671-22040709)
chr4 (167-205)||(39171372-39171410)
chr4 (167-205)||(43374274-43374312)
chr4 (170-208)||(48226716-48226754)
chr4 (169-210)||(17423174-17423215)
chr4 (166-210)||(675938-675982)
chr4 (169-205)||(1737184-1737220)
chr4 (161-205)||(10261771-10261815)
chr4 (161-205)||(21562640-21562684)
chr4 (167-207)||(22411785-22411825)
chr4 (161-205)||(24079842-24079886)
chr4 (161-205)||(26926712-26926756)
chr4 (161-205)||(43330161-43330205)
chr4 (169-208)||(19997363-19997402)
chr4 (169-208)||(27740763-27740802)
chr4 (167-206)||(49953404-49953443)
chr4 (170-205)||(54857617-54857652)
chr4 (168-218)||(1162930-1162980)
chr4 (167-205)||(11949765-11949803)
chr4 (161-207)||(13633220-13633266)
chr4 (167-205)||(16431637-16431675)
chr4 (167-205)||(19588175-19588213)
chr4 (167-205)||(20383509-20383547)
chr4 (167-205)||(25115070-25115108)
chr4 (167-205)||(31138995-31139033)
chr4 (171-205)||(34042265-34042299)
chr4 (167-201)||(35021473-35021507)
chr4 (168-214)||(49473667-49473713)
chr4 (168-205)||(7230302-7230339)
chr4 (162-214)||(11692667-11692720)
chr4 (170-207)||(13497255-13497292)
chr4 (161-205)||(14088578-14088623)
chr4 (168-205)||(20799396-20799433)
chr4 (167-200)||(25101397-25101430)
chr4 (167-204)||(25593566-25593603)
chr4 (168-205)||(37725723-37725760)
chr4 (167-204)||(48226501-48226538)
chr4 (168-209)||(56096226-56096267)
chr4 (166-214)||(13434894-13434942)
chr4 (161-208)||(16740413-16740461)
chr4 (168-204)||(23619123-23619159)
chr4 (170-210)||(32923200-32923240)
chr4 (167-207)||(37193270-37193310)
chr4 (168-208)||(42845047-42845087)
chr4 (169-205)||(49041983-49042019)
chr4 (166-206)||(49952570-49952610)
chr4 (173-205)||(50152240-50152272)
chr4 (161-205)||(51450227-51450271)
chr4 (166-202)||(55421574-55421610)
[»] scaffold0016 (2 HSPs)
scaffold0016 (170-205)||(204614-204649)
scaffold0016 (168-208)||(99059-99099)
[»] scaffold0011 (2 HSPs)
scaffold0011 (167-214)||(185284-185331)
scaffold0011 (169-205)||(189974-190010)
[»] scaffold1379 (1 HSPs)
scaffold1379 (167-205)||(1657-1695)
[»] scaffold0735 (1 HSPs)
scaffold0735 (167-201)||(1549-1583)
[»] scaffold1149 (1 HSPs)
scaffold1149 (168-205)||(2354-2391)
[»] scaffold0160 (1 HSPs)
scaffold0160 (170-215)||(22935-22980)
[»] scaffold0050 (1 HSPs)
scaffold0050 (168-205)||(53382-53419)
[»] scaffold1160 (1 HSPs)
scaffold1160 (168-200)||(1719-1751)
[»] scaffold1127 (1 HSPs)
scaffold1127 (170-210)||(1162-1202)
[»] scaffold1120 (1 HSPs)
scaffold1120 (170-210)||(1937-1977)
[»] scaffold0038 (1 HSPs)
scaffold0038 (168-208)||(31921-31961)
[»] scaffold0034 (1 HSPs)
scaffold0034 (168-204)||(114957-114993)
[»] scaffold0028 (1 HSPs)
scaffold0028 (168-208)||(72774-72814)


Alignment Details
Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 22504482 - 22504279
Alignment:
Q  15 aattttcggttcaaaacatacaaatatagtatattttaaagatatcttataggtaaactctagtttgcatcaatttgaagcgtctcttcttaatgacact 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22504482 aattttcggttcaaaacatacaaatatagtatattttaaagatatcttataggtaaactctagtttgcatcaatttgaagcgtctcttcttaatgacact 22504383  T
Q  115 gctttatcttttaattgaattagattagatgtgtgtcctcgttacggttggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  22504382 gctttatcttttaattgaattagattagatgtgtgtcctcgtgacggttggttggacaatgcataaaatatgcaaggttcggggttcaaactccgatcac 22504283  T
Q  215 tacc 218  Q
    ||||    
T  22504282 tacc 22504279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 37141378 - 37141419
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  37141378 tggacaatgcataatatatgcaaggttcggggttcaaactcc 37141419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41324134 - 41324186
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||||||||||||||||||||| ||||||||  || |||||||||    
T  41324134 ttggacaatgcataaaatatgcaaggttcgaggttcaaatcccggtcactacc 41324186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 8717515 - 8717477
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  8717515 tggacaatgcataatatatgcaaggttcggggttcaaac 8717477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 14279609 - 14279571
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  14279609 gacaatgcataaaatatgcaaggttcggggttcgaactc 14279571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 6109190 - 6109231
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  6109190 tggacaatgcataaaatatacaaggttcgtggttcaaactcc 6109231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 24838209 - 24838172
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  24838209 ggacaatgcataaaatatgcaaggtccggggttcaaac 24838172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 26799206 - 26799243
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  26799206 ggacaatgcataaaatatgcaaggttcggggttaaaac 26799243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 30694476 - 30694439
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  30694476 acaatgcataaaatatgcaaggttcggggtttaaactc 30694439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 12714409 - 12714373
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||| |||||||||||||||||||||||    
T  12714409 ggacaatgcataatatatgcaaggttcggggttcaaa 12714373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 20665409 - 20665365
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  20665409 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 20665365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 30550772 - 30550728
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  30550772 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 30550728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 39139033 - 39138997
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39139033 aatgcataaaatatgtaaggttcggggttcaaactcc 39138997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 44215521 - 44215477
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  44215521 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 44215477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 13124400 - 13124365
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||| ||||||||||||    
T  13124400 acaatgcataaaatatgcaaggtccggggttcaaac 13124365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 24023452 - 24023417
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24023452 acaatgcataaaatatgcaaggtccggggttcaaac 24023417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 32051573 - 32051534
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  32051573 ttggacaatgcataatatatgcaaggtccggggttcaaac 32051534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 33996092 - 33996131
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  33996092 gacaatgcataatatatgcaaagttcggggttcaaactcc 33996131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 4830029 - 4830063
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||| ||||||||||||||||||||    
T  4830029 tggacaatgcataatatatgcaaggttcggggttc 4830063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 5179815 - 5179853
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  5179815 ggacaatgcataatatatacaaggttcggggttcaaact 5179853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 8137956 - 8137994
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  8137956 tggacaatgcataaaatatgcaaagtttggggttcaaac 8137994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 8544634 - 8544588
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||| ||||||||||||||||  |||||||||||||||| |||||||    
T  8544634 aatgtataaaatatgcaaggtctggggttcaaactccagccactacc 8544588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 12748922 - 12748960
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  12748922 tggacaatgcataatatatgcaaggtccggggttcaaac 12748960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 20275228 - 20275186
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||| | |||||||||||||||||||||| ||||    
T  20275228 ggacaatgcataatacatgcaaggttcggggttcaaaccccag 20275186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 21061855 - 21061813
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||| | |||||||||||||||||||||| ||||    
T  21061855 ggacaatgcataatacatgcaaggttcggggttcaaaccccag 21061813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 23159462 - 23159500
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||| ||||||||||||||    
T  23159462 tggacaatgcataatatatgcaagattcggggttcaaac 23159500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 24429820 - 24429854
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||| ||||||||||||||    
T  24429820 tggacaatgcataaaatatgtaaggttcggggttc 24429854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 26196641 - 26196603
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||| |||||||||||||| ||||||||||||    
T  26196641 acaatgcataatatatgcaaggttcgtggttcaaactcc 26196603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 32115446 - 32115408
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  32115446 tggacaatgcataatatatgtaaggttcggggttcaaac 32115408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 32192915 - 32192949
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||| ||||||||||||||||||||    
T  32192915 tggacaatgcataatatatgcaaggttcggggttc 32192949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 33743597 - 33743635
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  33743597 ggacaatgcataaaatatgcaaggtccgaggttcaaact 33743635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 34420902 - 34420864
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  34420902 tggacaatgcataaaatatgcaaggtttgaggttcaaac 34420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 40400003 - 40400045
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  40400003 ggacaatgcataaaatatgcaaagttcgggtttcaaaccccag 40400045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 45049596 - 45049634
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||| ||||||||||||||| ||||||||||||||||||    
T  45049596 tggataatgcataaaatatgtaaggttcggggttcaaac 45049634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 3672663 - 3672618
Alignment:
Q  161 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||    
T  3672663 gttggttgagacaatgcataaaatatgcaaggtttagggttcaaac 3672618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 7869680 - 7869643
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  7869680 ggacaatgcataatatatgcaaggttgggggttcaaac 7869643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 8461875 - 8461838
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  8461875 ggacaatgcataaaatatgcaaggtccggagttcaaac 8461838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 27718934 - 27718893
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| ||||||||||| ||| |||||||||||    
T  27718934 tggacaatgcataatatatgcaaggtccggagttcaaactcc 27718893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 41860486 - 41860453
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||| |||||||||||||||||||||||||||||    
T  41860486 aatgtataaaatatgcaaggttcggggttcaaac 41860453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 4077712 - 4077748
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  4077712 gacaattcataatatatgcaaggttcggggttcaaac 4077748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 7679925 - 7679957
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||| ||||||||||||||||||||    
T  7679925 gacaatgcataatatatgcaaggttcggggttc 7679957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 17641899 - 17641859
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||| ||||||||||||||||||| |||| |||||||    
T  17641899 ggacaatgtataaaatatgcaaggttcgaggtttaaactcc 17641859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 212
Target Start/End: Complemental strand, 25277251 - 25277211
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactccagtc 212  Q
    ||||||||||||||||||||| |||||||| ||| ||||||    
T  25277251 aatgcataaaatatgcaaggtccggggttcgaaccccagtc 25277211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Complemental strand, 26932895 - 26932867
Alignment:
Q  177 ataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||||    
T  26932895 ataaaatatgcaaggttcggggttcaaac 26932867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 28580970 - 28581002
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||||| |||||||||||||||||    
T  28580970 aatgcataaaatatgtaaggttcggggttcaaa 28581002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 29924954 - 29924914
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||| ||||||||||||||||||| |||| ||||    
T  29924954 acaatgcataatatatgcaaggttcggggtttaaaccccag 29924914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 30429239 - 30429283
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| |||||  |||||||||||||||||||||||| ||||    
T  30429239 gttggttgaacaatatataaaatatgcaaggttcggggtttaaac 30429283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 32285760 - 32285796
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  32285760 acaatgcataatatatgcaaggttccgggttcaaact 32285796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 33105415 - 33105455
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  33105415 acaatgcataatatatgcaaggtccggggttcaaaccccag 33105455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 39076543 - 39076575
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||| ||||||||    
T  39076543 gacaatgcataaaatatgcaaggtccggggttc 39076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 39077029 - 39077061
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||| ||||||||    
T  39077029 gacaatgcataaaatatgcaaggtccggggttc 39077061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 6e-18; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 48103713 - 48103663
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48103713 ggacaatgcataaaatatgcaaggttcggggttcaaactccagccactacc 48103663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 5963865 - 5963817
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 217  Q
    ||||||||||||||||||||||||||||||||||||  |||| ||||||    
T  5963865 gacaatgcataaaatatgcaaggttcggggttcaaatcccagccactac 5963817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 6023329 - 6023368
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  6023329 ttggacaatgcttaaaatatgcaaggttcggggttcaaac 6023368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 4905297 - 4905335
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  4905297 tggacaatgcataaaatatgcaaggttcggagttcaaac 4905335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 19416535 - 19416573
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  19416535 tggacaatgcataaaatatgcaaggtccggggttcaaac 19416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 44406895 - 44406846
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 217  Q
    ||||||||||||||||||||||||| || |||||||| |||| |||||||    
T  44406895 ggacaatgcataaaatatgcaaggtccgaggttcaaattccaatcactac 44406846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 19626566 - 19626514
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  19626566 ttggacaatgcataatatatgcaaggtccggggttcaaacaccggccactacc 19626514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 20763169 - 20763213
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  20763169 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 20763213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 29488735 - 29488779
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  29488735 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 29488779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 33232443 - 33232399
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  33232443 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 33232399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 34284585 - 34284541
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  34284585 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 34284541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 46737805 - 46737857
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  46737805 ttggacaatgcataatatatgcaaggtccggggttcaaacaccggccactacc 46737857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 47342698 - 47342734
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaa 203  Q
    ||||||||||||||||||||||||||| |||||||||    
T  47342698 tggacaatgcataaaatatgcaaggtttggggttcaa 47342734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 10026014 - 10026053
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  10026014 ttggacaatgcataaaatatgcaaggtatggggttcaaac 10026053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 14623525 - 14623482
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||||||||||||||| |||||| |||||||||| |||||    
T  14623525 tggacaatgcataaaatatgtaaggtttggggttcaaattccag 14623482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 35224140 - 35224179
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  35224140 ggacaatgcataaaatatgcaaggtccgggtttcaaactc 35224179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 36755029 - 36755076
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  36755029 gttggtaggacaatgcataatatatgtaaggttcgggattcaaactcc 36755076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 36760826 - 36760873
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||| ||||||||||||| ||||| |||||||||| ||||||||||    
T  36760826 gttggtaggacaatgcataatatatgtaaggttcgggattcaaactcc 36760873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 40808200 - 40808161
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||| ||||||||||||||||||| ||||||||||||    
T  40808200 ttggacagtgcataaaatatgcaaggtccggggttcaaac 40808161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 47677614 - 47677579
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||| |||||||||||||||    
T  47677614 acaatgcataaaatatgcaatgttcggggttcaaac 47677579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Complemental strand, 1079729 - 1079695
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||||||||||||| |||||||||||    
T  1079729 acaatgcataaaatatgcaaggtccggggttcaaa 1079695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 6781828 - 6781866
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  6781828 tggacaatgcataaaatatgcaaggtccagggttcaaac 6781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 7908614 - 7908648
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||| ||||||||||||||    
T  7908614 tggacaatgcataaaatatgtaaggttcggggttc 7908648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 8084448 - 8084482
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||| ||||||||    
T  8084448 tggacaatgcataaaatatgcaaggtccggggttc 8084482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 10244748 - 10244786
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  10244748 tggacaatgcataatatatgcaaggtccggggttcaaac 10244786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 18773796 - 18773758
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  18773796 tggacaatgcataaaatatgtaaggtccggggttcaaac 18773758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 19599166 - 19599204
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  19599166 tggacaatgcataatatatgcaaggtccggggttcaaac 19599204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 27462476 - 27462438
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  27462476 tggacaatgcataatatatgcaaggtccggggttcaaac 27462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 42753566 - 42753524
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||| ||||||| ||||||||||| |||||||||||||||||    
T  42753566 ggacagtgcataatatatgcaaggtccggggttcaaactccag 42753524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 47342475 - 47342433
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||    
T  47342475 ttggacaatgcataatatatgcaaggtccggagttcaaactcc 47342433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 18714470 - 18714507
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  18714470 ggacaatgcataatatatgcaaggtccggggttcaaac 18714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 19578175 - 19578130
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||    
T  19578175 gacaatgcataaaatatgcaaggtctggggttcaaacctcagtcac 19578130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 30397090 - 30397123
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggtt 200  Q
    |||||||||||||||||||| |||||||||||||    
T  30397090 tggacaatgcataaaatatgtaaggttcggggtt 30397123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 36121679 - 36121724
Alignment:
Q  173 atgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||||||||||| |||||||||||| || | |||||||    
T  36121679 atgcataaaatatgcaaggtccggggttcaaaccccggccactacc 36121724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 39280855 - 39280818
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  39280855 acaatgcataatatatgcaaggtccggggttcaaactc 39280818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 39926577 - 39926540
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  39926577 ggacaatgcataatatatgcaatgttcggggttcaaac 39926540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 208
Target Start/End: Complemental strand, 3536301 - 3536253
Alignment:
Q  161 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||| |||||||||| ||||| |||||||||| ||||||||||    
T  3536301 gttggttggaacaatgcataatatatgtaaggttcgggattcaaactcc 3536253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 18023701 - 18023741
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||| | |||||||||||||    
T  18023701 ggacaatgcataatatatgcaaggtccagggttcaaactcc 18023741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 19036148 - 19036104
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| |||||||||||||||||||||||||  || ||||||||    
T  19036148 gttggtaggacaatgcataaaatatgcaaggtctggagttcaaac 19036104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 20085797 - 20085761
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  20085797 gacaatgcataatatatgcaaggtccggggttcaaac 20085761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 20718488 - 20718532
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| |||||||||||||||||||||||||  || ||||||||    
T  20718488 gttggtaggacaatgcataaaatatgcaaggtctggagttcaaac 20718532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 23221415 - 23221455
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcca 209  Q
    |||||||||||| ||||| |||||||| |||||||||||||    
T  23221415 gacaatgcataatatatgtaaggttcgtggttcaaactcca 23221455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 24027096 - 24027053
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    |||||||||||||||||||||| ||||||||||||| || |||||    
T  24027096 acaatgcataaaatatgcaagg-tcggggttcaaaccccggtcac 24027053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 24483936 - 24483896
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcca 209  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  24483936 gacagtgcataatatatgcaaagttcggggttcaaactcca 24483896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 39106698 - 39106666
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||||||| ||||||||    
T  39106698 aatgcataaaatatgcaaggttcgaggttcaaa 39106666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 42227844 - 42227804
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  42227844 ggacaatgcataatatatgtaaggttcgaggttcaaactcc 42227804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 42829273 - 42829233
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||| | |||||||||||||||    
T  42829273 ggacaatgcataatatatgcaagctccggggttcaaactcc 42829233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Original strand, 43139292 - 43139324
Alignment:
Q  173 atgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||| ||||||||||||    
T  43139292 atgcataaaatatgcaaggtacggggttcaaac 43139324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 44595675 - 44595635
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||||||||||||| |||||||| ||| ||||    
T  44595675 acaatgcataaaatatgcaaggtccggggttccaacaccag 44595635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 45425476 - 45425508
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||| ||||||||||||||||||||    
T  45425476 gacaatgcataatatatgcaaggttcggggttc 45425508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 2681740 - 2681696
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||| ||||||||||||||||||||||||||    
T  2681740 gttggttggacaatgcatcaaatatgcaaggttcggggttcaaac 2681696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 26356120 - 26356071
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 217  Q
    ||||||||||||| ||||||||||||||||||||||||||| | ||||||    
T  26356120 ggacaatgcataatatatgcaaggttcggggttcaaactccggccactac 26356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 33976259 - 33976303
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||||||||||||    
T  33976259 gttggtaggacaatgcataaaatatgcaaggtccggggttcaaac 33976303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 31895303 - 31895346
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  31895303 gttggttggacaatgcatcaaatatgcaaggctcggggttcaaa 31895346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 8629736 - 8629698
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  8629736 tggacaatgcataatatatgcaaggttcggggttcaaac 8629698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 19265562 - 19265524
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  19265562 gacaatgcataaaatatgcaaggtccggggttcaaactc 19265524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 30579881 - 30579919
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  30579881 ggacaatgcataaaatatgcaaggtttggggttcaaact 30579919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 12735282 - 12735245
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| |||||||||||    
T  12735282 ggacaatgcataaaatatgcaaggtttggggttcaaac 12735245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 24269904 - 24269937
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggtt 200  Q
    ||||||||||||||||||||||||||||||||||    
T  24269904 tggacaatgcataaaatatgcaaggttcggggtt 24269937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 32053809 - 32053850
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  32053809 tggacaatgcataatatatgcaaggttcgtggttcaaactcc 32053850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 247674 - 247718
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  247674 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 247718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 218
Target Start/End: Complemental strand, 8393800 - 8393741
Alignment:
Q  159 cggttggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||| ||||||||||||||||||||| | || ||||||| || | |||||||    
T  8393800 cggttggttggataatgcataaaatatgcaaggtccaggtttcaaaccccggccactacc 8393741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 10018414 - 10018461
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||||    
T  10018414 gttggtaggataatgcataatatatgtaaggttcggggttcaaactcc 10018461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 26320603 - 26320557
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||||||||||||||||| || ||||||||||||| |||||    
T  26320603 tggacaatgcataaaatatgcaagg-tccgggttcaaactccggtcac 26320557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 8569730 - 8569768
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  8569730 tggacaatgcataatatatgcaaggtccggggttcaaac 8569768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 24623357 - 24623319
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  24623357 tggacaatgcataatatatgtaaggttcggggttcaaac 24623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 788888 - 788925
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  788888 ggacaatgcataatatatgcaaggttcggagttcaaac 788925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 12904354 - 12904317
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  12904354 acaatgcataatatatgcaaggttcggagttcaaactc 12904317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 33824903 - 33824940
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  33824903 ggacaatgcataatatatgcaaggtccggggttcaaac 33824940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 5937646 - 5937690
Alignment:
Q  161 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||| |||||||||||||||||| ||||| |||||||||||    
T  5937646 gttggttgagacaatgcataaaatatgaaaggtccggggttcaaa 5937690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 12582275 - 12582231
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| |||||||||||||||||||||||||  || ||||||||    
T  12582275 gttggtaggacaatgcataaaatatgcaaggtctggagttcaaac 12582231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 21029401 - 21029369
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||| |||||||||||||||||||||||    
T  21029401 aatgcataatatatgcaaggttcggggttcaaa 21029369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 23635751 - 23635711
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||| ||||| ||||||||| |||||||||||||    
T  23635751 acaatgcataatatatgtaaggttcggagttcaaactccag 23635711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 23903345 - 23903309
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| |||||||| |||||||||||||||    
T  23903345 gacaatgcataatatatgcaacgttcggggttcaaac 23903309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 26548275 - 26548315
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||| |||| |||||||||||||||||||||||| ||||    
T  26548275 acaatgtataatatatgcaaggttcggggttcaaaccccag 26548315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 28231464 - 28231424
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||| ||||||||| |||||    
T  28231464 ggacaatgcataatatatgcaaggtccggggttcacactcc 28231424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 29680614 - 29680650
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  29680614 aatgcataatatatgcaaggttcggtgttcaaactcc 29680650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 161162 - 161200
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||||||||||||||    
T  161162 tggacaatgcataaaatatgcaaggttcggggttcaaac 161200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 7202963 - 7202905
Alignment:
Q  161 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||| |||||||||||||||||||||||| |||||||||| || |||||||||    
T  7202963 gttggttggaacaatgcataaaatatgcaaggttcagggttcaaaccccggtcactacc 7202905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 44675767 - 44675821
Alignment:
Q  163 tggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 217  Q
    |||||||||||||||| |||||||||||||||||||||||||  | |||||||||    
T  44675767 tggttggacaatgcatcaaatatgcaaggttcggggttcaaatcctagtcactac 44675821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 7626499 - 7626458
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  7626499 gacaatgcataaaatatgcaaggtccggggttcaaactccag 7626458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 42886547 - 42886511
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||||||||||||    
T  42886547 gacaatgcataaaatatgcaaggttcggggttcaaac 42886511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 205
Target Start/End: Original strand, 39779036 - 39779083
Alignment:
Q  159 cggttggt-tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||    
T  39779036 cggttggtatggacaatgcataatatatgcaaggttcggggttcaaac 39779083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 48796259 - 48796220
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  48796259 ttggacaatgcataagatatgcaaggttcggggttcaaac 48796220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Original strand, 50037332 - 50037375
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  50037332 tggacaatgcataatgtatgcaaggttcggggttcaaactccag 50037375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 25340964 - 25340926
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25340964 tggacaatgcataaaatatgcaaggtccggggttcaaac 25340926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 8127485 - 8127522
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| |||||||||||    
T  8127485 ggacaatgcataaaatatgcaaggtttggggttcaaac 8127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 54018446 - 54018409
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||||||||||| |||||||||    
T  54018446 tggacaatgcataaaatatgcaaggttcagggttcaaa 54018409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 916454 - 916498
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  916454 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 916498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 3695720 - 3695684
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||| ||||||||||||||||||    
T  3695720 gacaatgcataaaatatgaaaggttcggggttcaaac 3695684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 10926491 - 10926527
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||| |||||||||||||||||||||||    
T  10926491 ggacaatgcataatatatgcaaggttcggggttcaaa 10926527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 215
Target Start/End: Original strand, 33745120 - 33745168
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccagtcact 215  Q
    ||||||||||||||||||||||||||  ||||||||||| |||| ||||    
T  33745120 tggacaatgcataaaatatgcaaggtctggggttcaaaccccagccact 33745168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 41030189 - 41030237
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||| |||||||||||||||||| | |||||||||||| |||||||||    
T  41030189 acaatacataaaatatgcaaggtttgaggttcaaactccggtcactacc 41030237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 42276433 - 42276397
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||| ||||||||||||||||||||||||||||||||    
T  42276433 aatgtataaaatatgcaaggttcggggttcaaactcc 42276397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 47536519 - 47536479
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||||||||||||| || ||||||||||||    
T  47536519 ggacaatgcataaaatatgcaaggtccgaggttcaaactcc 47536479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 203
Target Start/End: Original strand, 7738691 - 7738726
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaa 203  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7738691 ggacaatgcataaaatatgcaaggtccggggttcaa 7738726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 32843303 - 32843264
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  32843303 ttggacaatgcataaaatatgcaaggtctggggttcaaac 32843264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 41817519 - 41817558
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  41817519 ttggacaatgcataatatatgcaaggtccggggttcaaac 41817558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 48022352 - 48022313
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  48022352 gacaatgcataatatatgcaaagttcggggttcaaactcc 48022313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 203
Target Start/End: Original strand, 17262204 - 17262234
Alignment:
Q  173 atgcataaaatatgcaaggttcggggttcaa 203  Q
    |||||||||||||||||||||||||||||||    
T  17262204 atgcataaaatatgcaaggttcggggttcaa 17262234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 21331457 - 21331423
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||| ||||||||||||||||||||    
T  21331457 tggacaatgcataatatatgcaaggttcggggttc 21331423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 210
Target Start/End: Complemental strand, 27065771 - 27065729
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||||||||||||||| | |||||||||| ||||    
T  27065771 ggacaatgcataaaatatgcaaggtccagggttcaaaccccag 27065729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 29631207 - 29631245
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  29631207 tggacaatgcataatatatgcaaggttcgggattcaaac 29631245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 32629101 - 32629135
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||| ||||||||    
T  32629101 tggacaatgcataaaatatgcaaggtccggggttc 32629135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 38130999 - 38130961
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  38130999 tggacaatgcataatatatgcaaggtccggggttcaaac 38130961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 44579657 - 44579691
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||| ||||||||    
T  44579657 tggacaatgcataaaatatgcaaggtccggggttc 44579691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 204
Target Start/End: Original strand, 45334213 - 45334247
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||| |||||||||||||||||||||||    
T  45334213 acaatgcataatatatgcaaggttcggggttcaaa 45334247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 49710744 - 49710782
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  49710744 acaatgcataaaatatgcaaggtccggagttcaaactcc 49710782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 53162219 - 53162257
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  53162219 tggacaatgcataaaatatgcaaggtttgaggttcaaac 53162257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 334882 - 334849
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||| ||||||||||||    
T  334882 aatgcataaaatatgcaaggtccggggttcaaac 334849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 2078263 - 2078300
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  2078263 gacaatgcataatatatgcaaggtttggggttcaaact 2078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 8957966 - 8957999
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttc 201  Q
    ||||||||||||| ||||||||||||||||||||    
T  8957966 ggacaatgcataatatatgcaaggttcggggttc 8957999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 19126717 - 19126680
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  19126717 tggacaatgcataaaatatgtaaggtttggggttcaaa 19126680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 20018219 - 20018256
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||  |||||||||||    
T  20018219 ggacaatgcataaaatatgcaaggtctggggttcaaac 20018256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 25728007 - 25727970
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||| ||||||||||| |||||||||||    
T  25728007 tggacaatgcataatatatgcaaggtccggggttcaaa 25727970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 30050468 - 30050427
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| ||||||||| |||| ||||||||||||    
T  30050468 tggacaatgcataatatatgcaagattcgcggttcaaactcc 30050427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 32037072 - 32037035
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||||| ||| |||||||||||    
T  32037072 tggacaatgcataaaatatgcagggtacggggttcaaa 32037035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 32909341 - 32909304
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||||||||| | |||||||||    
T  32909341 tggacaatgcataaaatatgcaaggtcctgggttcaaa 32909304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 34442486 - 34442449
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  34442486 ggacaatgcataaaatatgtaaggtccggggttcaaac 34442449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 34899119 - 34899156
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  34899119 ggacaatgcataatatatgcaaggtccggggttcaaac 34899156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 38034848 - 38034811
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  38034848 ggacaatacataaaatatgcaaggtccggggttcaaac 38034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 44075195 - 44075158
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  44075195 ggacaatgcataaaatatgcaaggtccggagttcaaac 44075158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 45431970 - 45432007
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  45431970 ggacaatgcataatatatgcaaggtccggggttcaaac 45432007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 52119398 - 52119431
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttc 201  Q
    ||||||||||||| ||||||||||||||||||||    
T  52119398 ggacaatgcataatatatgcaaggttcggggttc 52119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 8238586 - 8238626
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  8238586 ggacaatgcataatatatgcaaggtctggggttcaaactcc 8238626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 20612314 - 20612266
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||| |||||||||||| ||||||||||| || | |||||||    
T  20612314 acaatgcataatatatgcaaggtttggggttcaaaccccggccactacc 20612266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 25955332 - 25955292
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||| |||||||||| || |||||||||||    
T  25955332 ggacaatgcataaaacatgcaaggtttggagttcaaactcc 25955292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 28965814 - 28965770
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||| ||||| |||||||||||||||||| || |||||    
T  28965814 acaatgcataatatatgtaaggttcggggttcaaaccccggtcac 28965770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 47099070 - 47099038
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||| |||||||||||||||||||||||    
T  47099070 aatgcataatatatgcaaggttcggggttcaaa 47099038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 48656937 - 48656901
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  48656937 gacaatgcataatatatgcaaggtccggggttcaaac 48656901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 48849801 - 48849765
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  48849801 gacaatgcataatatatgcaaggtccggggttcaaac 48849765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 52337381 - 52337345
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  52337381 aatgtataaaatatgcaaggttcgggtttcaaactcc 52337345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 54742318 - 54742278
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcca 209  Q
    |||||||||||||||||||||||||  || |||||||||||    
T  54742318 gacaatgcataaaatatgcaaggtttaggattcaaactcca 54742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 15668512 - 15668570
Alignment:
Q  161 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||    
T  15668512 gttggttggaacaatgcataaaatatgcaaggtccggggttcaaaccccagccactacc 15668570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 23203336 - 23203381
Alignment:
Q  161 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  23203336 gttggttggaacaatgcataaaatatgcaaggttcggggttcaaac 23203381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 1605417 - 1605455
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  1605417 tggacaatgcataaaatatgcaaggtccggggttcaaac 1605455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 2596977 - 2596939
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  2596977 acaatgcataaaatatgcaaggtccggggttcaaactcc 2596939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 5503802 - 5503764
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  5503802 acaatgcataaaatatacaaggttcggggttcaaactcc 5503764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 8736456 - 8736494
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  8736456 tggacaatgcataaaatatgcaaggtccggggttcaaac 8736494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 40735045 - 40735007
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  40735045 tggacaatgcataaaatatgtaaggttcggggttcaaac 40735007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 48100743 - 48100781
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  48100743 tggacaatgcataaaatatgcaaggtttggggttcaaac 48100781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 13778587 - 13778620
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||||||||||    
T  13778587 aatgcataaaatatgcaaggttcggggttcaaac 13778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 16967234 - 16967193
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  16967234 tggacaatgcataatatatgcaaggttcgaggttcaaactcc 16967193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 27533265 - 27533302
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27533265 ggacaatgcataatatatgcaaggttcggggttcaaac 27533302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 29739359 - 29739396
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  29739359 ggacaatgcataaaatatgcaaggtccggggttcaaac 29739396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 17669667 - 17669707
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  17669667 ggacaatgtataatatatgcaaggttcggggttcaaactcc 17669707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 13590130 - 13590169
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  13590130 ttggacaatgcataaaatatgtaaggttcggagttcaaac 13590169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 204
Target Start/End: Complemental strand, 44678055 - 44678020
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||| |||||||||||||||||||||||    
T  44678055 gacaatgcataatatatgcaaggttcggggttcaaa 44678020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Original strand, 1091202 - 1091240
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||  |||||||||||||||||||||||||    
T  1091202 gacaatgcataatgtatgcaaggttcggggttcaaactc 1091240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 2613743 - 2613777
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||| ||||||||||||||    
T  2613743 tggacaatgcataaaatatgtaaggttcggggttc 2613777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 11181975 - 11181937
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  11181975 tggacaatgcatgaaatatgcaaggtgcggggttcaaac 11181937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 16475693 - 16475644
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||| |||||||    
T  16475693 ggacaatgcataaaatatgtaag-ttcggggttcaaattccagccactacc 16475644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 16791423 - 16791389
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    ||||||| |||||||||||||||||||||||||||    
T  16791423 tggacaacgcataaaatatgcaaggttcggggttc 16791389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 17917178 - 17917140
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  17917178 tggacaatgcataaaatatgtaaggttcgggattcaaac 17917140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Original strand, 22346696 - 22346734
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  22346696 ttggataatgcataaaatatgcaaggtccggggttcaaa 22346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 23334608 - 23334650
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||||||||||| |  |||||||||||    
T  23334608 ttggacaatgcataaaatatgcaaggtttgaagttcaaactcc 23334650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 25532994 - 25533032
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  25532994 tggacaatgcataatatatgcaaggtccggggttcaaac 25533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 34521230 - 34521192
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  34521230 tggacaatgcataatatatgcaaggtccggggttcaaac 34521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 42888596 - 42888630
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||| ||||||||    
T  42888596 tggacaatgcataaaatatgcaaggtccggggttc 42888630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 45190309 - 45190271
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  45190309 tggacaatgcataatatatgcaaggttcgggattcaaac 45190271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 46839015 - 46838977
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  46839015 acaatgcataaaatatgcaatgatcggggttcaaactcc 46838977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 48646766 - 48646724
Alignment:
Q  167 tggacaatgcataa-aatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| |||||||||||| |||||||||||||||    
T  48646766 tggacaatgcataataatatgcaaggtccggggttcaaactcc 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 52262203 - 52262165
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  52262203 acaatgcataaaatatgcaaagttcgaggttcaaactcc 52262165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 18335858 - 18335821
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  18335858 ggacaatgtataaaatatgcaaggttcagggttcaaac 18335821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 36228588 - 36228629
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||||||||| ||  |||||||||||    
T  36228588 tggacaatgcataaaatatgcaaggtgcgaagttcaaactcc 36228629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 39387831 - 39387790
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||| |||||||||||||||||||||| ||||||| ||||||    
T  39387831 tggataatgcataaaatatgcaaggtttggggttcgaactcc 39387790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 41763190 - 41763157
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||| ||||||||||||    
T  41763190 aatgcataaaatatgcaaggtccggggttcaaac 41763157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 47417805 - 47417842
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  47417805 ggacaatgcataatatatgcaaggttcggagttcaaac 47417842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Complemental strand, 48898530 - 48898493
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  48898530 gacagtgcataatatatgcaaggttcggggttcaaact 48898493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 50040378 - 50040415
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  50040378 ggacaatgcataaaatatgcaaggtccagggttcaaac 50040415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 52043294 - 52043331
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  52043294 tggataatgcataaaatatgcaatgttcggggttcaaa 52043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 4715600 - 4715564
Alignment:
Q  165 gttggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||| |||||||||||||||||||||||| |||||||    
T  4715600 gttgaacaatgcataaaatatgcaaggtttggggttc 4715564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 204
Target Start/End: Complemental strand, 8551474 - 8551430
Alignment:
Q  161 gttggttggacaatgcataaa-atatgcaaggttcggggttcaaa 204  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||    
T  8551474 gttgattggacaatgcataaagatatgcaaggtccggggttcaaa 8551430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Complemental strand, 11462960 - 11462928
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||| ||||||||    
T  11462960 gacaatgcataaaatatgcaaggtccggggttc 11462928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 13401620 - 13401656
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  13401620 gacaatgcataatatatgtaaggttcggggttcaaac 13401656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 16033489 - 16033449
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  16033489 ggacaatgcataatatatgcaaggtctggggttcaaactcc 16033449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 16967007 - 16966971
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  16967007 aatgcataatatatgcaaggttcgaggttcaaactcc 16966971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 21341206 - 21341242
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  21341206 ggacaatgcataatatatgcaaggttcgaggttcaaa 21341242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 32007636 - 32007600
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||| |||||| |||||||||||    
T  32007636 ggacaatgcataaaatatacaaggtccggggttcaaa 32007600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 38862123 - 38862163
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||||||||||||||  ||||||| |||||    
T  38862123 tggacaatgcataaaatatgcaaggtctggggttcgaactc 38862163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 39252184 - 39252144
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcca 209  Q
    |||||| ||||| ||||||||||| ||||||||||||||||    
T  39252184 gacaatacataatatatgcaaggtccggggttcaaactcca 39252144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 44860924 - 44860872
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||||||||||| ||||||  ||||||||||| || | |||||||    
T  44860924 ttggacaatgcataaaatatccaaggtctggggttcaaaccccggccactacc 44860872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 45481515 - 45481555
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||| |||||||| ||||||    
T  45481515 ggacaatgcataatatatgcaaggtccggggttcgaactcc 45481555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 49222840 - 49222880
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||| || ||||||||||| |||||||||||||||||    
T  49222840 acaatgcacaatatatgcaaggtccggggttcaaactccag 49222880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 50250338 - 50250302
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  50250338 gacaatgcataaaatatacaaggttcagggttcaaac 50250302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 210
Target Start/End: Original strand, 18789059 - 18789100
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  18789059 gacaatgcataaaatatgcaaggttcggggttcaaaccccag 18789100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 43135024 - 43135072
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  43135024 acaatgcataaaatatgcaaggtttggggttcaaaccccagccactacc 43135072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 10704371 - 10704332
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10704371 tggacaatgcataaaatatgcaaggtccggggttcaaact 10704332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 11637612 - 11637578
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||||||||||||    
T  11637612 tggacaatgcataaaatatgcaaggttcggggttc 11637578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 27903137 - 27903175
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27903137 acaatgcataatatatgcaaggttcggggttcaaactcc 27903175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 34191455 - 34191505
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||||||||||||| |||||||||||| || | |||||||    
T  34191455 ggacaatgcataaaatatgcaaggtccggggttcaaaccccggccactacc 34191505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 38495163 - 38495201
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  38495163 tggataatgcataaaatatgcaaggttcggggttcaaac 38495201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 5551328 - 5551283
Alignment:
Q  161 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  5551328 gttggttggaacaatgcataaaatatgcaaggtttggggttcaaac 5551283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 6345053 - 6345097
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| |||||| | ||||||||||    
T  6345053 gttggttggacaatgcataaaatatacaaggtacagggttcaaac 6345097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 18331728 - 18331764
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaa 203  Q
    |||||||||||||||||||||||||| ||||||||||    
T  18331728 tggacaatgcataaaatatgcaaggtccggggttcaa 18331764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 37462126 - 37462170
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  37462126 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 37462170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 776695 - 776742
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||| |||||||||||||||||||||||||||  | ||||||||||||    
T  776695 gttgattggacaatgcataaaatatgcaaggtctgaggttcaaactcc 776742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 205
Target Start/End: Complemental strand, 22522850 - 22522803
Alignment:
Q  159 cggttggt-tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  22522850 cggttggtatggacaatgcataatatatgcaaggtccggggttcaaac 22522803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 35494011 - 35493972
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||| |||||||||||||||| ||||||||||    
T  35494011 gacaatgcataatatatgcaaggttcgggattcaaactcc 35493972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 207
Target Start/End: Original strand, 39963515 - 39963554
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  39963515 ggacaatgcataatatatgtaaggttcggggttcaaactc 39963554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 41117855 - 41117898
Alignment:
Q  171 caatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||    
T  41117855 caatgtataaaatatgcaaggttcgaggttcaaactccggtcac 41117898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 2839818 - 2839860
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||    
T  2839818 ttggataatgcataatatatccaaggttcggggttcaaactcc 2839860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 14861949 - 14861987
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||| |||| ||||||||||||    
T  14861949 tggacaatgcataaaatatgctaggtacggggttcaaac 14861987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 35270720 - 35270670
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||||||||||||| | ||||||||||   ||||||||||    
T  35270720 ggacaatgcataaaatatgcaaggtccagggttcaaaccttagtcactacc 35270670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 40715989 - 40715951
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  40715989 tggacaatgcataatatatgcaaggtccggggttcaaac 40715951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 41630151 - 41630105
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||||| |||||||||||||||| ||||||| || |||||    
T  41630151 ggacaatgcataatatatgcaaggttcgggattcaaaccccggtcac 41630105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 204
Target Start/End: Complemental strand, 42613245 - 42613207
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  42613245 ttggacaatgcataaaatatgcaaggtctggggttcaaa 42613207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 133611 - 133554
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||| |||||||||||||| |||||| ||| ||||||| || | |||||||    
T  133611 gttggttggacgatgcataaaatatgtaaggtttgggtttcaaaccccggccactacc 133554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 12670109 - 12670076
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||| ||||||||||||||||||||||||    
T  12670109 aatgcataatatatgcaaggttcggggttcaaac 12670076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 17708095 - 17708132
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||||||||||||| | |||||||    
T  17708095 tggacaatgcataaaatatgcaaggttcagagttcaaa 17708132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 20688060 - 20688101
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||| ||||||||||| ||| ||||||||||    
T  20688060 ttggacaatgcataatatatgcaaggtccggagttcaaactc 20688101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 32234784 - 32234820
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||| |||||||||||||    
T  32234784 ggacaatgcataaaatatgcaagg-tcggggttcaaac 32234820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 5015295 - 5015339
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| |||||||| |||| ||||||||||||||| ||||||||    
T  5015295 gttggtaggacaatgaataatatatgcaaggttcggagttcaaac 5015339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 16076452 - 16076488
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaa 203  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  16076452 tggacaatgcataatatatgcaaggttcagggttcaa 16076488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 20125048 - 20125087
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  20125048 ggacaatgcataatatatgcaaggttc-gggttcaaactcc 20125087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 20175850 - 20175882
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||| ||||||||||    
T  20175850 gacaatgcataaaatatgcaagattcggggttc 20175882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 21354352 - 21354316
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||| |||||||||||||||||||| |||||||||||    
T  21354352 aatgtataaaatatgcaaggttcggagttcaaactcc 21354316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 26166754 - 26166798
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||| ||||||||||||| | ||||||||||    
T  26166754 gttggtcggacaatgcatcaaatatgcaaggtccagggttcaaac 26166798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Original strand, 27679524 - 27679556
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||| |||||||||||||||||||||||    
T  27679524 aatgcataatatatgcaaggttcggggttcaaa 27679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 37054308 - 37054268
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||  |||||||||||||||||||||    
T  37054308 ggacaatgcataatatatataaggttcggggttcaaactcc 37054268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 4833252 - 4833309
Alignment:
Q  161 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactac 217  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  4833252 gttggttgagacaatgcataaaatatgcaaggatcggggttcaaaccccagccactac 4833309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 218
Target Start/End: Original strand, 11551191 - 11551240
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  11551191 gacaatgcataaaatatgcaagattcggggttcaaactccggccactacc 11551240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 22709099 - 22709157
Alignment:
Q  161 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||| |||||||||||||||||||||||| |||||||||||| || | |||||||    
T  22709099 gttggttgagacaatgcataaaatatgcaaggtccggggttcaaaccccggccactacc 22709157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 24305345 - 24305311
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||||||||||||    
T  24305345 tggacaatgcataaaatatgcaaggttcggggttc 24305311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 14735933 - 14735892
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  14735933 tggacaatgcataaaatatgtaaggttcgaggttcaaactcc 14735892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 3708708 - 3708752
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  3708708 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 3708752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 11868708 - 11868664
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  11868708 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 11868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 20120760 - 20120724
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20120760 ggacaatgcataatatatgcaaggttcggggttcaaa 20120724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 20990942 - 20990906
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| ||||||||||    
T  20990942 gacaatgcataaaatatgcaaggttcagggttcaaac 20990906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 21929485 - 21929529
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||    
T  21929485 gttggttggacaatgcataaaatatacaaggtcaggggttcaaac 21929529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 35360101 - 35360057
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  35360101 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 35360057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 36474784 - 36474820
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36474784 ggacaatgcataaaatatgcaaggtccggggttcaaa 36474820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 41356175 - 41356211
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||| |||||||||||||||||||    
T  41356175 gacaatgcataaaatatacaaggttcggggttcaaac 41356211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 42791315 - 42791367
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||| ||||||||||| |||||||||||| || | |||||||    
T  42791315 ttggacaatgcataatatatgcaaggtccggggttcaaaccccggccactacc 42791367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 10811097 - 10811140
Alignment:
Q  175 gcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    |||||||||||||||||| |||||||||||| |||| |||||||    
T  10811097 gcataaaatatgcaaggtccggggttcaaaccccagccactacc 10811140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 12751281 - 12751316
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||| |||||||||||||||||||||||||    
T  12751281 acaatgcatagaatatgcaaggttcggggttcaaac 12751316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 201
Target Start/End: Complemental strand, 16221383 - 16221352
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttc 201  Q
    ||||||||||||||||||||||||||||||||    
T  16221383 acaatgcataaaatatgcaaggttcggggttc 16221352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 25186282 - 25186239
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||    
T  25186282 tggacaatgcataatatatgcaaggtccggggttcaaaccccag 25186239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Original strand, 36359334 - 36359373
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  36359334 ttggacaatgcataatatatgcaaggtccggggttcaaac 36359373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 8091198 - 8091160
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  8091198 tggacaatgcataatatatgcaaggtccggggttcaaac 8091160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 9547449 - 9547411
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  9547449 tggacaatgcataatatatgcaaggtttggggttcaaac 9547411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 9842241 - 9842196
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||    
T  9842241 ggacaatgcataaaatatgcaaggtttggggttcgaa-tccagtcac 9842196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 19159965 - 19160003
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  19159965 acaatgcataatatatgcaaggttcggagttcaaactcc 19160003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 19189884 - 19189846
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  19189884 tggacaatgtataaaatatgcaaggttcggagttcaaac 19189846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 34376914 - 34376948
Alignment:
Q  174 tgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||||| ||||||||||||    
T  34376914 tgcataaaatatgcaaggttcgaggttcaaactcc 34376948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 35194319 - 35194273
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||||| |||||||||||| || ||||||||| |||||||    
T  35194319 ggacaatgcataatatatgcaaggtttggagttcaaactgcagtcac 35194273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 41859873 - 41859911
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  41859873 tggacaatgcataaaatatgcaaggtctggggttcaaac 41859911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Original strand, 4180723 - 4180756
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||| ||||||||||||    
T  4180723 aatgcataaaatatgcaaggtccggggttcaaac 4180756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 208
Target Start/End: Original strand, 4238780 - 4238821
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||| ||||| |||||||||||||| ||||||    
T  4238780 tggacaatgcataatatatgtaaggttcggggttcgaactcc 4238821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 205
Target Start/End: Complemental strand, 5168614 - 5168581
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||| ||||||||||||||||||||||||    
T  5168614 aatgcataatatatgcaaggttcggggttcaaac 5168581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 11560520 - 11560557
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  11560520 ggacaatgcataatatatgcaaggttcagggttcaaac 11560557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 17328045 - 17328008
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  17328045 ggacaatgcataaaataagcaaggtccggggttcaaac 17328008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 20565114 - 20565077
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20565114 ggacaatgcataatatatgcaaggtccggggttcaaac 20565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 24579709 - 24579668
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||| ||||||||||| | ||||||||||||    
T  24579709 ttggacaatgcataatatatgcaaggtccagggttcaaactc 24579668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 27017549 - 27017512
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  27017549 ggacaatgcataaaataggcaaggtttggggttcaaac 27017512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 29544649 - 29544686
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  29544649 ggacaatgcataatatatgcaaggtccggggttcaaac 29544686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 31815926 - 31815889
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  31815926 ggacaatgcataatatatgcaaggtccggggttcaaac 31815889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Original strand, 33866912 - 33866949
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  33866912 acaatgcataaaatatgcaaggttcagagttcaaactc 33866949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Complemental strand, 3113766 - 3113730
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  3113766 ggacaatgcataaaatatgcaaggtccgggattcaaa 3113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 23468081 - 23468045
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    ||||||||||| |||||||||||| ||||||||||||    
T  23468081 acaatgcataatatatgcaaggttgggggttcaaact 23468045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 26400773 - 26400813
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  26400773 ggacaatgcataatatatgcaaggttgggtgttcaaactcc 26400813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 204
Target Start/End: Complemental strand, 28874587 - 28874555
Alignment:
Q  172 aatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||| ||||||||||||||||||||||||||||    
T  28874587 aatgtataaaatatgcaaggttcggggttcaaa 28874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 30243273 - 30243309
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| |||| |||||||||||||||||||    
T  30243273 gacaatgcataatatatacaaggttcggggttcaaac 30243309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 42347690 - 42347730
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||||||||||||| | | |||||||||||    
T  42347690 ggacaatgcataaaatatgcaaggtccagtgttcaaactcc 42347730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 44694711 - 44694747
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| |||||||||| |||||||||||||    
T  44694711 gacaatgcataatatatgcaaggctcggggttcaaac 44694747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000006; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 16584989 - 16584949
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  16584989 tggacaatgcataaaatatgcaaggttcggagttcaaactc 16584949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Complemental strand, 25783488 - 25783440
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcacta 216  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  25783488 ggacaatgcataatatatgcaaggtccggggttcaaactccggtcacta 25783440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 28435288 - 28435245
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||||||||| |||||||||||||||||||||||| ||||    
T  28435288 tggacaatgcataatatatgcaaggttcggggttcaaaccccag 28435245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 30848023 - 30847980
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactcca 209  Q
    ||||||||||||||||||||||||||| || |||||||||||||    
T  30848023 ttggacaatgcataaaatatgcaaggtccgaggttcaaactcca 30847980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 9946448 - 9946486
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  9946448 tggacaatgcataaaatatgcaaggtccggggttcaaac 9946486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 22040671 - 22040709
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  22040671 tggacaatgcataatatatgcaaggttcggggttcaaac 22040709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 39171410 - 39171372
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  39171410 tggacaatgcataaaatatgcaaggttcagggttcaaac 39171372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 43374312 - 43374274
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43374312 tggacaatgcataaaatatgcaaggttcggagttcaaac 43374274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 208
Target Start/End: Original strand, 48226716 - 48226754
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  48226716 acaatgcataaaatatgcaaggtccggggttcaaactcc 48226754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 17423215 - 17423174
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  17423215 gacaatgcataatatatgcaaggtccggggttcaaactccag 17423174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 675938 - 675982
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  675938 ttggacaatgcataatatatgcaaggtccggggttcaaaccccag 675982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 1737184 - 1737220
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||||| ||||||||    
T  1737184 gacaatgcataaaatatgcaaggttcggagttcaaac 1737220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 10261815 - 10261771
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  10261815 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 10261771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 21562640 - 21562684
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  21562640 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 21562684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 22411785 - 22411825
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  22411785 tggacaatgcataatatatgtaaggttcggggttcaaactc 22411825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 24079886 - 24079842
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  24079886 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 24079842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 26926756 - 26926712
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  26926756 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 26926712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 43330161 - 43330205
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||    
T  43330161 gttggtaggacaatgcataaaatatgcaaggtccggagttcaaac 43330205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Complemental strand, 19997402 - 19997363
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  19997402 gacaatgcataatatatgcaaagttcggggttcaaactcc 19997363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 208
Target Start/End: Original strand, 27740763 - 27740802
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  27740763 gacaatgcataaaatatgcaaggttcggagttcgaactcc 27740802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 49953443 - 49953404
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    |||||||||||||| ||||||||||| |||||||||||||    
T  49953443 tggacaatgcataatatatgcaaggtccggggttcaaact 49953404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Complemental strand, 54857652 - 54857617
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||| ||||||||||||    
T  54857652 acaatgcataaaatatgcaaggtccggggttcaaac 54857617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 1162980 - 1162930
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcactacc 218  Q
    ||||||||||||||||||| ||| |  |||||||||||||||| |||||||    
T  1162980 ggacaatgcataaaatatgtaagatgtggggttcaaactccagccactacc 1162930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 11949803 - 11949765
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  11949803 tggacaatgcataatatatgcaaggtccggggttcaaac 11949765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 13633266 - 13633220
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    |||||||||||||| ||| ||||||| |||||| |||||||||||||    
T  13633266 gttggttggacaatacatcaaatatgtaaggtttggggttcaaactc 13633220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 16431637 - 16431675
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  16431637 tggacaatgcataaaatatgcaaggtctggggttcaaac 16431675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 19588175 - 19588213
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  19588175 tggacaatgcataaaatatgcaaggtccagggttcaaac 19588213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 20383509 - 20383547
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  20383509 tggacaatgcataatatatgcaaggtccggggttcaaac 20383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 25115070 - 25115108
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||| ||||||||||||| ||||||||||    
T  25115070 tggacaatgcataacatatgcaaggttcagggttcaaac 25115108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 31139033 - 31138995
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||| || |||||||||    
T  31139033 tggacaatgcataaaatatgcaaggtccgaggttcaaac 31138995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 205
Target Start/End: Original strand, 34042265 - 34042299
Alignment:
Q  171 caatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||| ||||||||||||||||||||||||    
T  34042265 caatgcataatatatgcaaggttcggggttcaaac 34042299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 35021507 - 35021473
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||| ||||||||||||||||||||||||||    
T  35021507 tggacaatacataaaatatgcaaggttcggggttc 35021473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 214
Target Start/End: Original strand, 49473667 - 49473713
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||||| ||||||||||| |||||||| ||| ||||||||    
T  49473667 ggacaatgcataatatatgcaaggtccggggttcgaaccccagtcac 49473713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 7230302 - 7230339
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  7230302 ggacaatgcataatatatgcaaggtccggggttcaaac 7230339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 214
Target Start/End: Original strand, 11692667 - 11692720
Alignment:
Q  162 ttggttggacaatgcataaaatatgcaaggt-tcggggttcaaactccagtcac 214  Q
    ||||| ||||||||||||| ||||||||||| | |||||||||||||| |||||    
T  11692667 ttggtaggacaatgcataatatatgcaaggtctgggggttcaaactccggtcac 11692720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 13497292 - 13497255
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  13497292 acaatgaataaaatatgcaaggttcagggttcaaactc 13497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 14088578 - 14088623
Alignment:
Q  161 gttggttgga-caatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||| ||||| ||||||||| |||||||||||||||||||    
T  14088578 gttggttggaacaatgtataaaatatacaaggttcggggttcaaac 14088623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 20799433 - 20799396
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| ||||||||||| ||||||||||||    
T  20799433 ggacaatgcataatatatgcaaggtccggggttcaaac 20799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Complemental strand, 25101430 - 25101397
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggtt 200  Q
    ||||||||||||||||||||||||| ||||||||    
T  25101430 tggacaatgcataaaatatgcaagggtcggggtt 25101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 25593603 - 25593566
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  25593603 tggacgatgcataaaatatgcaaggttcggagttcaaa 25593566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 37725760 - 37725723
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| |||||||||||||||||||||||| ||||    
T  37725760 ggacaatgtataaaatatgcaaggttcggggtttaaac 37725723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 48226538 - 48226501
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  48226538 tggacaatgcataaaatatgcaaggtctggggttcaaa 48226501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 56096226 - 56096267
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcca 209  Q
    ||||||||||||| ||||| |||||||| |||||||||||||    
T  56096226 ggacaatgcataatatatgtaaggttcgtggttcaaactcca 56096267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 13434942 - 13434894
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    ||||||||||||||||||||||||||| ||  ||| ||||||| |||||    
T  13434942 ttggacaatgcataaaatatgcaaggtccgaagttaaaactccggtcac 13434894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 16740413 - 16740461
Alignment:
Q  161 gttggttg-gacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    |||||||| |||||||||||||||||||||||||| | ||||| |||||    
T  16740413 gttggttgagacaatgcataaaatatgcaaggttcagtgttcagactcc 16740461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 23619123 - 23619159
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  23619123 ggacaatgcataaaatatacaaagttcggggttcaaa 23619159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 32923240 - 32923200
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||| ||||| |||||||||||||||||| ||||    
T  32923240 acaatgcataatatatgtaaggttcggggttcaaaccccag 32923200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 37193270 - 37193310
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactc 207  Q
    ||||||||| |||| ||||||||||| ||||||||||||||    
T  37193270 tggacaatgtataatatatgcaaggtccggggttcaaactc 37193310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 42845047 - 42845087
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||| ||||||| |||||||    
T  42845047 ggacaatgcataatatatgcaaggtccggggttaaaactcc 42845087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 49042019 - 49041983
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  49042019 gacaatgcataatatatgcaaggtccggggttcaaac 49041983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 49952610 - 49952570
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttcaaact 206  Q
    ||||||||||||||| ||||| ||||| |||||||||||||    
T  49952610 ttggacaatgcataatatatgtaaggtccggggttcaaact 49952570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 205
Target Start/End: Complemental strand, 50152272 - 50152240
Alignment:
Q  173 atgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||| ||||||||||||||||||||||||    
T  50152272 atgcataatatatgcaaggttcggggttcaaac 50152240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 51450227 - 51450271
Alignment:
Q  161 gttggttggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||| ||||||||||||| ||||||||||| ||| ||||||||    
T  51450227 gttggtaggacaatgcataagatatgcaaggtccggagttcaaac 51450271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 55421610 - 55421574
Alignment:
Q  166 ttggacaatgcataaaatatgcaaggttcggggttca 202  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  55421610 ttggacaatgcataatatatgcaaggttcagggttca 55421574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 205
Target Start/End: Original strand, 204614 - 204649
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||||||| ||||||||||||||||||    
T  204614 acaatgcataaaatatgtaaggttcggggttcaaac 204649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 99059 - 99099
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| |||||||||||  ||||||||||||||    
T  99059 ggacaatgcataatatatgcaaggtctggggttcaaactcc 99099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 185284 - 185331
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaactccagtcac 214  Q
    |||||||||||||||||||||||| | |||||||||||| || |||||    
T  185284 tggacaatgcataaaatatgcaagatccggggttcaaaccccggtcac 185331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Complemental strand, 190010 - 189974
Alignment:
Q  169 gacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  190010 gacaatgcataatatatgtaaggttcggggttcaaac 189974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 1657 - 1695
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  1657 tggacaatgcatagtatatgcaaggttcggggttcaaac 1695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 201
Target Start/End: Original strand, 1549 - 1583
Alignment:
Q  167 tggacaatgcataaaatatgcaaggttcggggttc 201  Q
    |||||||||||||||||||||||||| ||||||||    
T  1549 tggacaatgcataaaatatgcaaggtccggggttc 1583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 2354 - 2391
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  2354 ggacaatgcataatatatgcaaggtttggggttcaaac 2391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 22935 - 22980
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccagtcact 215  Q
    ||||||||||||||||||||||| || ||||||||| || ||||||    
T  22935 acaatgcataaaatatgcaaggtccgaggttcaaaccccggtcact 22980  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 53419 - 53382
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaac 205  Q
    |||||||||||||||||||||||||  |||||||||||    
T  53419 ggacaatgcataaaatatgcaaggtctggggttcaaac 53382  T

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Target: scaffold1160 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 1751 - 1719
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggtt 200  Q
    |||||||||||||||||||||||||||| ||||    
T  1751 ggacaatgcataaaatatgcaaggttcgaggtt 1719  T

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Target: scaffold1127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 1202 - 1162
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||| ||||||||||| |||||||||||| ||||    
T  1202 acaatgcataatatatgcaaggtccggggttcaaaccccag 1162  T

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Target: scaffold1120 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 210
Target Start/End: Original strand, 1937 - 1977
Alignment:
Q  170 acaatgcataaaatatgcaaggttcggggttcaaactccag 210  Q
    ||||||||||| |||||||||||||| ||||||||| ||||    
T  1937 acaatgcataatatatgcaaggttcgtggttcaaaccccag 1977  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 31961 - 31921
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||| ||||||||| |||||    
T  31961 ggacaatgcataatatatgcaaggtccggggttcacactcc 31921  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 114957 - 114993
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaa 204  Q
    ||||| ||||||||||||||||||| |||||||||||    
T  114957 ggacagtgcataaaatatgcaaggtccggggttcaaa 114993  T

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Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 72814 - 72774
Alignment:
Q  168 ggacaatgcataaaatatgcaaggttcggggttcaaactcc 208  Q
    ||||||||||||| ||||||||||| | |||||||||||||    
T  72814 ggacaatgcataatatatgcaaggtccagggttcaaactcc 72774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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