View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_309 (Length: 249)
Name: NF10829A_low_309
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_309 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 41415288 - 41415133
Alignment:
| Q |
11 |
gatgaatagatggtcaatacttagcagataaaacattttttcctttattggtttagaacacaagtaaattttttctatgaaagaaggaaactttgtttcc |
110 |
Q |
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| T |
41415288 |
gatgaattgatggtcaatacttagcagataaaacattttttcctttattggtttagaacacaagtaaattttttctatgaaagaaggaaactttgtttcc |
41415189 |
T |
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| Q |
111 |
aatttaaaacctatctttagattagtcaaacaagtatcaaatagtttgaagggtgc |
166 |
Q |
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| T |
41415188 |
aatttaaaacctatctttagattagtcaaacaagtatcaaatagtttgaagggtgc |
41415133 |
T |
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