View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10829A_low_372 (Length: 239)

Name: NF10829A_low_372
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10829A_low_372
NF10829A_low_372
[»] chr7 (18 HSPs)
chr7 (20-152)||(3597950-3598082)
chr7 (196-239)||(3061612-3061655)
chr7 (196-239)||(5090933-5090976)
chr7 (196-239)||(5091053-5091096)
chr7 (196-239)||(7884958-7885001)
chr7 (196-239)||(7891257-7891300)
chr7 (196-239)||(13400718-13400761)
chr7 (196-239)||(13927406-13927449)
chr7 (196-239)||(20959414-20959457)
chr7 (196-239)||(22004480-22004523)
chr7 (196-239)||(22004571-22004614)
chr7 (196-239)||(26161944-26161987)
chr7 (196-239)||(32656709-32656752)
chr7 (196-239)||(32656809-32656852)
chr7 (196-239)||(45112732-45112775)
chr7 (197-239)||(7891349-7891391)
chr7 (197-239)||(27712719-27712761)
chr7 (97-149)||(27962549-27962602)
[»] chr3 (19 HSPs)
chr3 (30-93)||(2252444-2252507)
chr3 (20-89)||(2251888-2251957)
chr3 (41-134)||(49233904-49233997)
chr3 (196-239)||(6953318-6953361)
chr3 (196-239)||(18199318-18199361)
chr3 (196-239)||(18199409-18199452)
chr3 (196-239)||(18256801-18256844)
chr3 (196-239)||(26943955-26943998)
chr3 (196-239)||(31483620-31483663)
chr3 (196-239)||(35713160-35713203)
chr3 (196-239)||(36093991-36094034)
chr3 (196-239)||(36948030-36948073)
chr3 (196-239)||(47724571-47724614)
chr3 (197-239)||(6953457-6953499)
chr3 (197-239)||(13458629-13458671)
chr3 (197-239)||(16647473-16647515)
chr3 (197-239)||(17657195-17657237)
chr3 (196-238)||(18256681-18256723)
chr3 (41-134)||(49234475-49234569)
[»] chr2 (17 HSPs)
chr2 (41-134)||(24455801-24455894)
chr2 (196-239)||(180225-180268)
chr2 (196-239)||(204379-204422)
chr2 (196-239)||(980048-980091)
chr2 (196-239)||(980501-980544)
chr2 (196-239)||(1501809-1501852)
chr2 (196-239)||(2444138-2444181)
chr2 (196-239)||(5001145-5001188)
chr2 (196-239)||(5012815-5012858)
chr2 (196-239)||(13905772-13905815)
chr2 (196-239)||(13905863-13905906)
chr2 (196-239)||(19640925-19640968)
chr2 (196-239)||(19839518-19839561)
chr2 (196-239)||(26453409-26453452)
chr2 (196-239)||(40603245-40603288)
chr2 (197-239)||(26453501-26453543)
chr2 (197-239)||(40603336-40603378)
[»] chr1 (19 HSPs)
chr1 (41-134)||(50862480-50862573)
chr1 (196-239)||(2052092-2052135)
chr1 (196-239)||(7476043-7476086)
chr1 (196-239)||(7476604-7476647)
chr1 (196-239)||(9530070-9530113)
chr1 (196-239)||(15689244-15689287)
chr1 (196-239)||(15689406-15689449)
chr1 (196-239)||(22194894-22194937)
chr1 (196-239)||(22195064-22195107)
chr1 (196-239)||(35598183-35598226)
chr1 (196-239)||(36455241-36455284)
chr1 (196-239)||(39514143-39514186)
chr1 (196-239)||(39514234-39514277)
chr1 (196-239)||(42492489-42492532)
chr1 (196-239)||(45507281-45507324)
chr1 (196-239)||(48647770-48647813)
chr1 (197-239)||(2051781-2051823)
chr1 (197-239)||(2052001-2052043)
chr1 (197-239)||(36871041-36871083)
[»] scaffold1113 (1 HSPs)
scaffold1113 (196-239)||(2502-2545)
[»] scaffold0121 (1 HSPs)
scaffold0121 (196-239)||(41206-41249)
[»] scaffold0097 (1 HSPs)
scaffold0097 (196-239)||(44658-44701)
[»] chr8 (4 HSPs)
chr8 (196-239)||(18278555-18278598)
chr8 (196-239)||(24014140-24014183)
chr8 (41-136)||(43228035-43228130)
chr8 (97-149)||(14839088-14839141)
[»] chr6 (6 HSPs)
chr6 (196-239)||(2271871-2271914)
chr6 (196-239)||(24456448-24456491)
chr6 (196-239)||(29374263-29374306)
chr6 (196-239)||(33049745-33049788)
chr6 (198-239)||(29921047-29921088)
chr6 (196-232)||(33007316-33007352)
[»] chr5 (14 HSPs)
chr5 (196-239)||(10037208-10037251)
chr5 (196-239)||(12651311-12651354)
chr5 (196-239)||(23178434-23178477)
chr5 (196-239)||(23179506-23179549)
chr5 (196-239)||(23180095-23180138)
chr5 (196-239)||(23184363-23184406)
chr5 (196-239)||(32672766-32672809)
chr5 (196-239)||(32672857-32672900)
chr5 (196-239)||(34757357-34757400)
chr5 (196-239)||(39874191-39874234)
chr5 (197-239)||(3611848-3611890)
chr5 (197-239)||(20109134-20109176)
chr5 (197-239)||(20109902-20109944)
chr5 (197-239)||(30094371-30094413)
[»] chr4 (20 HSPs)
chr4 (196-239)||(16905855-16905898)
chr4 (196-239)||(21380339-21380382)
chr4 (196-239)||(22673808-22673851)
chr4 (196-239)||(22673901-22673944)
chr4 (196-239)||(28380277-28380320)
chr4 (196-239)||(29363749-29363792)
chr4 (196-239)||(29363870-29363913)
chr4 (196-239)||(30390843-30390886)
chr4 (196-239)||(35756442-35756485)
chr4 (196-239)||(41861966-41862009)
chr4 (196-239)||(41862057-41862100)
chr4 (196-239)||(41862148-41862191)
chr4 (196-239)||(41862239-41862282)
chr4 (196-239)||(42345136-42345179)
chr4 (196-239)||(42345257-42345300)
chr4 (196-239)||(52680234-52680277)
chr4 (196-239)||(53285662-53285705)
chr4 (197-239)||(14148428-14148470)
chr4 (197-239)||(14148574-14148616)
chr4 (197-239)||(52680326-52680368)


Alignment Details
Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 3597950 - 3598082
Alignment:
Q  20 cacaatatcagtccacaaactgaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattattcagaaaattaccttaaaccagctcc 119  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  3597950 cacaatatcagtccaccaactgaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattattcagaaaattacttcaaaccagctcc 3598049  T
Q  120 aaatagttaagcacaaaaattgaatatgaatat 152  Q
    ||||||||||||| ||| |||||||||||||||    
T  3598050 aaatagttaagcaaaaacattgaatatgaatat 3598082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 3061655 - 3061612
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  3061655 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 3061612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 5090933 - 5090976
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  5090933 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 5090976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 5091053 - 5091096
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  5091053 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 5091096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 7884958 - 7885001
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  7884958 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 7885001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 7891257 - 7891300
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  7891257 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 7891300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 13400761 - 13400718
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  13400761 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 13400718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 13927406 - 13927449
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  13927406 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 13927449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 20959457 - 20959414
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  20959457 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 20959414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22004480 - 22004523
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22004480 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 22004523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22004571 - 22004614
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22004571 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 22004614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 26161944 - 26161987
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  26161944 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 32656709 - 32656752
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  32656709 caaaacctaaccatattccctaattcacctcctccaaaccctaa 32656752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 32656809 - 32656852
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  32656809 caaaacctaaccatattccctaattcacctcctccaaaccctaa 32656852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 45112732 - 45112775
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  45112732 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 45112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 7891349 - 7891391
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  7891349 aaaacctaaccatatttcctaattcccctcctccaaaccctaa 7891391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 27712719 - 27712761
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  27712719 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 27712761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 27962549 - 27962602
Alignment:
Q  97 gaaaattaccttaaaccagctccaaatagttaagcacaaaaat-tgaatatgaa 149  Q
    |||||||||||| |||||||||  |||||||||||||||| || ||||||||||    
T  27962549 gaaaattaccttgaaccagctctgaatagttaagcacaaacatctgaatatgaa 27962602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 2252507 - 2252444
Alignment:
Q  30 gtccacaaactgaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattat 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2252507 gtccacaaactgaaaaccagctctgaattatgcagaaaaccaccaggaatttgctctgaattat 2252444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 89
Target Start/End: Complemental strand, 2251957 - 2251888
Alignment:
Q  20 cacaatatcagtccacaaactgaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  2251957 cacaatatcagtccacaaactgaaaaccagctctgaattatgcagaaaaccgctaggaatttgctctgaa 2251888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 49233904 - 49233997
Alignment:
Q  41 gaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattattcagaaaattaccttaaaccagctccaaatagttaagcaca 134  Q
    ||||||||||||| |||||||||||||| ||||  || || ||||  |||||| |||||||||||||| |||||||||  ||||||||||||||    
T  49233904 gaaaaccagctctaaattatgcagaaaatcacctcgatctcgctccaaattatgcagaaaattaccttgaaccagctctgaatagttaagcaca 49233997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 6953361 - 6953318
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  6953361 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 6953318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 18199318 - 18199361
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  18199318 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 18199361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 18199409 - 18199452
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  18199409 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 18199452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 18256844 - 18256801
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  18256844 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 18256801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 26943955 - 26943998
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  26943955 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 26943998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 31483620 - 31483663
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  31483620 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 31483663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 35713160 - 35713203
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  35713160 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 35713203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 36094034 - 36093991
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  36094034 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 36093991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 36948073 - 36948030
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  36948073 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 36948030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 47724571 - 47724614
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  47724571 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 47724614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 6953499 - 6953457
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  6953499 aaaacctaaccatatttcctaattcccctcctccaaaccctaa 6953457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 13458671 - 13458629
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  13458671 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 13458629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 16647473 - 16647515
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  16647473 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 16647515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 17657195 - 17657237
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  17657195 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 17657237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 18256723 - 18256681
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaacccta 238  Q
    |||||||||||| ||||||||||||| ||||||| ||||||||    
T  18256723 caaaacctaaccatatttcctaattcccctcctccaaacccta 18256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 134
Target Start/End: Original strand, 49234475 - 49234569
Alignment:
Q  41 gaaaaccagctctgaattatgca-gaaaaccaccaggaacttgctctgaattattcagaaaattaccttaaaccagctccaaatagttaagcaca 134  Q
    ||||||||||||| ||||||||| ||||| ||||  || || ||||  |||||| || ||||||||||| |||||||||  |||| |||||||||    
T  49234475 gaaaaccagctctaaattatgcaagaaaatcacctcgatctcgctccaaattatgcataaaattaccttgaaccagctctgaataattaagcaca 49234569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 24455894 - 24455801
Alignment:
Q  41 gaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattattcagaaaattaccttaaaccagctccaaatagttaagcaca 134  Q
    ||||||||||||| |||||||||||||| ||||  || || ||||  |||||| |||||||||||||| |||||||||  ||||||||||||||    
T  24455894 gaaaaccagctctaaattatgcagaaaatcacctcgatctcgctccaaattatgcagaaaattaccttgaaccagctctgaatagttaagcaca 24455801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 180225 - 180268
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  180225 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 204379 - 204422
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  204379 caaaacctaaccatattccctaattcacctcctccaaaccctaa 204422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 980091 - 980048
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  980091 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 980048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 980544 - 980501
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  980544 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 980501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 1501809 - 1501852
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  1501809 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 1501852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 2444138 - 2444181
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  2444138 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 2444181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 5001188 - 5001145
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  5001188 caaaacctaaccttatttcctaattcccctcctccaaaccctaa 5001145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 5012858 - 5012815
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  5012858 caaaacctaaccttatttcctaattcccctcctccaaaccctaa 5012815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 13905772 - 13905815
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  13905772 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 13905815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 13905863 - 13905906
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  13905863 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 13905906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 19640925 - 19640968
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  19640925 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 19640968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 19839518 - 19839561
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  19839518 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 19839561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 26453409 - 26453452
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  26453409 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 26453452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 40603245 - 40603288
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  40603245 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 40603288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 26453501 - 26453543
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  26453501 aaaacctaaccatatttcctaattcccctcctccaaaccctaa 26453543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 40603336 - 40603378
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  40603336 aaaacctaaccatatttcctaattcccctcctccaaaccctaa 40603378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 134
Target Start/End: Complemental strand, 50862573 - 50862480
Alignment:
Q  41 gaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattattcagaaaattaccttaaaccagctccaaatagttaagcaca 134  Q
    ||||| ||||||| |||||||||||||| ||||  || || ||||  |||||| ||||||| |||||| |||||||||  ||||| ||||||||    
T  50862573 gaaaatcagctctaaattatgcagaaaatcacctcgatctcgctccaaattatgcagaaaactaccttgaaccagctctgaatagataagcaca 50862480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 2052135 - 2052092
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  2052135 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 2052092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 7476043 - 7476086
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  7476043 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 7476086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 7476604 - 7476647
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  7476604 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 7476647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 9530070 - 9530113
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  9530070 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 9530113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 15689244 - 15689287
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  15689244 caaaacctaaccatatttcctaattctcctcctccaaaccctaa 15689287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 15689406 - 15689449
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  15689406 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 15689449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22194894 - 22194937
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22194894 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 22194937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22195064 - 22195107
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22195064 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 22195107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 35598226 - 35598183
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  35598226 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 35598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 36455241 - 36455284
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  36455241 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 36455284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 39514186 - 39514143
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  39514186 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 39514143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 39514277 - 39514234
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  39514277 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 39514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 42492489 - 42492532
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  42492489 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 42492532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 45507324 - 45507281
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  45507324 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 45507281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 48647770 - 48647813
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  48647770 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 48647813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 2051823 - 2051781
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  2051823 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 2051781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 2052043 - 2052001
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  2052043 aaaacctaaccatatttcctaattcccctcctccaaaccctaa 2052001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 36871083 - 36871041
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  36871083 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 36871041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1113 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 2545 - 2502
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  2545 caaaacctaaccatatttcctaattcccctcctctaaaccctaa 2502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 41206 - 41249
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  41206 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 41249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 44701 - 44658
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  44701 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 44658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000005; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 18278598 - 18278555
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  18278598 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 18278555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 24014183 - 24014140
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  24014183 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 24014140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 136
Target Start/End: Complemental strand, 43228130 - 43228035
Alignment:
Q  41 gaaaaccagctctgaattatgcagaaaaccaccaggaacttgctctgaattattcagaaaattaccttaaaccagctccaaatagttaagcacaaa 136  Q
    |||| ||| |||| |||||||||||||| ||||  || ||  |||  |||||| |||||||||||||| ||||| |||  ||||||||||||||||    
T  43228130 gaaagccaactctaaattatgcagaaaatcaccccgatctcactccaaattatgcagaaaattaccttgaaccaactctgaatagttaagcacaaa 43228035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 97 - 149
Target Start/End: Complemental strand, 14839141 - 14839088
Alignment:
Q  97 gaaaattaccttaaaccagctccaaatagttaagcacaaaaat-tgaatatgaa 149  Q
    |||||||||||| |||||||||  |||||||||||||||| || ||||||||||    
T  14839141 gaaaattaccttgaaccagctctgaatagttaagcacaaacatctgaatatgaa 14839088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 2271871 - 2271914
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  2271871 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 2271914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 24456448 - 24456491
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  24456448 caaaacctaaccatatttcctaattctcctcctccaaaccctaa 24456491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 29374306 - 29374263
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  29374306 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 29374263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 33049788 - 33049745
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  33049788 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 33049745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 239
Target Start/End: Original strand, 29921047 - 29921088
Alignment:
Q  198 aaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||| ||||||||||||| ||||||| |||||||||    
T  29921047 aaacctaaccatatttcctaattctcctcctccaaaccctaa 29921088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 33007352 - 33007316
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaa 232  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  33007352 caaaacctaaccatatttcctaattcccctcctcaaa 33007316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 32; Significance: 0.000000005; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 10037208 - 10037251
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  10037208 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 10037251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 12651311 - 12651354
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  12651311 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 12651354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 23178434 - 23178477
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  23178434 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 23178477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 23179506 - 23179549
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  23179506 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 23179549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 23180095 - 23180138
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  23180095 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 23180138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 23184363 - 23184406
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  23184363 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 23184406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 32672766 - 32672809
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  32672766 caaaacctaaccatatttcctaattctcctcctccaaaccctaa 32672809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 32672857 - 32672900
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  32672857 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 32672900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 34757357 - 34757400
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  34757357 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 34757400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 39874191 - 39874234
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  39874191 caaaacctaaccatatttcctaattcccctcctcgaaaccctaa 39874234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 3611890 - 3611848
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  3611890 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 3611848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 20109176 - 20109134
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  20109176 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 20109134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 20109944 - 20109902
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  20109944 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 20109902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 30094413 - 30094371
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  30094413 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 30094371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 16905855 - 16905898
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  16905855 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 16905898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 21380339 - 21380382
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  21380339 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 21380382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22673808 - 22673851
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22673808 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 22673851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 22673901 - 22673944
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  22673901 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 22673944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 28380277 - 28380320
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  28380277 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 28380320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 29363792 - 29363749
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  29363792 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 29363749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 29363913 - 29363870
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  29363913 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 29363870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 30390886 - 30390843
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| |||| |||||||||||||||| |||||||||    
T  30390886 caaaacctaaccatattccctaattcacctcctccaaaccctaa 30390843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 35756442 - 35756485
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  35756442 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 35756485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 41862009 - 41861966
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  41862009 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 41861966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 41862100 - 41862057
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  41862100 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 41862057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 41862191 - 41862148
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  41862191 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 41862148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Complemental strand, 41862282 - 41862239
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  41862282 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 41862239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 42345136 - 42345179
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  42345136 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 42345179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 42345257 - 42345300
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  42345257 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 42345300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 52680234 - 52680277
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  52680234 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 52680277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 239
Target Start/End: Original strand, 53285662 - 53285705
Alignment:
Q  196 caaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||    
T  53285662 caaaacctaaccatatttcctaattcccctcctccaaaccctaa 53285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 14148470 - 14148428
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  14148470 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 14148428  T

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Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 14148616 - 14148574
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  14148616 aaaacctaaccatatttcctaattctcctcctccaaaccctaa 14148574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Original strand, 52680326 - 52680368
Alignment:
Q  197 aaaacctaaccgtatttcctaattcacctcctcaaaaccctaa 239  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||    
T  52680326 aaaacctaaccatatttcctaattcccctcctccaaaccctaa 52680368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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