View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_398 (Length: 234)
Name: NF10829A_low_398
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_398 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 22 - 215
Target Start/End: Original strand, 38145217 - 38145410
Alignment:
| Q |
22 |
atttcatacaacaatttacacaccaaatgaaccttcattcgcaaccatccttgattccttagcaatgaacctaaggtgtttggcaccatctacaccgaaa |
121 |
Q |
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| T |
38145217 |
atttcatacaacaatttacactccaaatgaaccttcattcgcaaccatccttgattccttagcaatgaacctaaggtgtttggcaccatctacaccgaaa |
38145316 |
T |
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| Q |
122 |
cccgaattcatattcacaccctcccaagattcctatgtccaagcagccgtaatttgctccaagaaacttggaatccatctaagagtaagaagtg |
215 |
Q |
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| T |
38145317 |
cccgaattcatattcacaccctcccaagattcccatgtccaagcagccgtaatttgctccaagaaacttggaatccatctaagagtaagaagtg |
38145410 |
T |
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