View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10829A_low_401 (Length: 232)
Name: NF10829A_low_401
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10829A_low_401 |
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Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 24 - 216
Target Start/End: Original strand, 1968757 - 1968949
Alignment:
| Q |
24 |
agaaactaaccaacaactaannnnnnncaaatgtaaagttttcacctactgttataaaagattatggtatctatataaatgaattaacaattatcaaatt |
123 |
Q |
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| T |
1968757 |
agaaactaaccaacaactaatttttttcaaatgtaaagttttcacccactattataaaagattatggtatctatataaatgaattaacaattatcaaatt |
1968856 |
T |
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| Q |
124 |
aattgagatcctatattacgatttttaatatgtcacctgaccttagaatttcccattctattcttatgattccatattatttgtttctttgtt |
216 |
Q |
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| T |
1968857 |
aattgagatcctatattacgatttttaatatgtcacctgaccttggaatttcccattctattcttatgattccatattatttgtttctttgtt |
1968949 |
T |
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