View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10829A_low_475 (Length: 226)

Name: NF10829A_low_475
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10829A_low_475
NF10829A_low_475
[»] chr7 (20 HSPs)
chr7 (1-213)||(21714095-21714307)
chr7 (12-221)||(21788152-21788361)
chr7 (11-199)||(21651991-21652179)
chr7 (1-222)||(21628037-21628258)
chr7 (66-221)||(21646720-21646875)
chr7 (1-221)||(21704555-21704775)
chr7 (1-221)||(21785315-21785538)
chr7 (2-104)||(21763978-21764077)
chr7 (1-104)||(21771873-21771976)
chr7 (1-221)||(21808181-21808404)
chr7 (61-221)||(21681622-21681782)
chr7 (1-104)||(21725808-21725911)
chr7 (89-208)||(21745532-21745651)
chr7 (1-221)||(21664007-21664230)
chr7 (61-221)||(15713595-15713755)
chr7 (1-188)||(21992082-21992272)
chr7 (1-70)||(21741018-21741087)
chr7 (153-221)||(21623257-21623325)
chr7 (153-221)||(21764126-21764194)
chr7 (68-221)||(21791990-21792143)
[»] scaffold0182 (2 HSPs)
scaffold0182 (2-221)||(25223-25442)
scaffold0182 (1-69)||(34446-34514)


Alignment Details
Target: chr7 (Bit Score: 109; Significance: 5e-55; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 21714095 - 21714307
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 100  Q
    ||||||||  || |||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||||||| ||    
T  21714095 atattgaatgaaggatggcatcccaaactattaaagaaaaatttgtggagctacaaaaatcaatgcaaacaccccaaaattcacgaccgaagatacaaag 21714194  T
Q  101 ggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaag 200  Q
    ||||   || | | ||| |||| |||||| |||||||  |||||||   || ||||| |||||||| |||||||||||||||||||||||||||||||||    
T  21714195 ggtggttgaccgtttcagaaatagaacaaattttgagaagcattactcacccaagtttgtgtcattaggtcctatccatcatgacaatccaaatctgaag 21714294  T
Q  201 ataggagagaagt 213  Q
    | |||||||||||    
T  21714295 aaaggagagaagt 21714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 12 - 221
Target Start/End: Original strand, 21788152 - 21788361
Alignment:
Q  12 atgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatc 111  Q
    ||||||||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||| || ||||| |||||| ||||      
T  21788152 atgatggcatcccaaactattaatgaaaaatttgtggagttacaaaaatcaaagcaaacaccccaaaattcacgaccgaaaatacaaagggtggcagagt 21788251  T
Q  112 atctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaa 211  Q
    |||||| |||| ||| ||  ||||||  |||||||   || |||||| ||||  | ||||||||||||||||||||  ||||| ||||| ||||||||||    
T  21788252 atctcagaaatagaaaaaactttgagaagcattactcgcccaagttgttgtcggtaggtcctatccatcatgacaacacaaatttgaagttaggagagaa 21788351  T
Q  212 gttcaagctt 221  Q
    || |||||||    
T  21788352 gtacaagctt 21788361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 11 - 199
Target Start/End: Original strand, 21651991 - 21652179
Alignment:
Q  11 aatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagat 110  Q
    ||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |     
T  21651991 aatgatggcatcccaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaacaccccaaaattcacgaccaaagatacaaagggtgccacag 21652090  T
Q  111 catctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaa 199  Q
     |||||| |||| |||  | |||||||   |||||||  || ||||| || ||| | ||||||||||||||||||||| ||||| ||||    
T  21652091 tatctcagaaatagaaacaattttgagaaacattacacccccaagtttgtttcaataggtcctatccatcatgacaatacaaatatgaa 21652179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 21628037 - 21628258
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 100  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||| || || || | |||||||||||||||| |||| |||||||||||||||| ||    
T  21628037 atattgaaagaatgatggcatcccaaactattaaagaaaaatttgtggagttaaaaaattcaaagcaaacaccccgaaatgcacgaccaaagatacaaag 21628136  T
Q  101 ggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaag 200  Q
    |||| | |||||||||| ||||  || |  ||||| |  | |||||   || ||||| |||||| | |||||||||||||||| || | ||||||||||     
T  21628137 ggtggccgatcatctcagaaataaaaaagattttgggaagtattactcacccaagtttgtgtcaataggtcctatccatcatggcagtacaaatctgaac 21628236  T
Q  201 ataggagagaagttcaagcttg 222  Q
    ||||||||||||| ||||||||    
T  21628237 ataggagagaagtacaagcttg 21628258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 21646720 - 21646875
Alignment:
Q  66 caaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcat 165  Q
    |||||||||||||||||||||||||||||||| |||||| || |  |||||| |||| ||||||  ||||||| ||||||||  || ||||||||||||     
T  21646720 caaacaccccaaaattcacgaccaaagatacaaagggtgccacagtatctcagaaatagaacaaaatttgaggagcattacacccccaagttggtgtcaa 21646819  T
Q  166 ttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 221  Q
    | |||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  21646820 taggtcctatccatcatgacaatccaaagctgaagataggagagaaatacaagctt 21646875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 21704555 - 21704775
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 100  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  || || || | |||||||||||||| | |||| |||||||||||||||| ||    
T  21704555 atattgaatgaatgatggcatcccaaactattaaagaaaaatttgtcgagttaaaaaattcaaagcaaacacctccaaatgcacgaccaaagatacaaag 21704654  T
Q  101 ggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaag 200  Q
    ||||  |||  |||||| || | ||| ||  ||||||  |||||||   || ||||| |||||  | ||||||||||||||||||||||||| |||||||    
T  21704655 ggtgcaagagtatctcagaagtagaaaaaactttgagcagcattactcacccaagttagtgtcgataggtcctatccatcatgacaatccaactctgaag 21704754  T
Q  201 ataggagagaagttcaagctt 221  Q
     |||||||||||| |||||||    
T  21704755 ttaggagagaagtacaagctt 21704775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 21785315 - 21785538
Alignment:
Q  1 atattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 97  Q
    ||||||||  ||||||| ||||||||||||   || || ||||| ||||| ||||| || | |||||||||| |||||||||||||||||||||||||||    
T  21785315 atattgaatcaatgatgacatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaccaaagataca 21785414  T
Q  98 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 197  Q
     ||||||  |||  |||| | |||| | | ||  ||||||  |||||||   || ||||| |||||| | ||||||||||||||||||||||||||||||    
T  21785415 aagggtgcaagagtatctaagaaataggaaaaactttgagaagcattactcacccaagttagtgtcaataggtcctatccatcatgacaatccaaatctg 21785514  T
Q  198 aagataggagagaagttcaagctt 221  Q
    |||| ||||||||||| |||||||    
T  21785515 aagacaggagagaagtacaagctt 21785538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 21763978 - 21764077
Alignment:
Q  2 tattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagg 101  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||| |||||||| |||    
T  21763978 tattgaatgaatgatggcatcccaaactcttaaagaaaaatttgtggagctacaa---tcaaagcaaacaccccaaaattcacgacccaagatacaaagg 21764074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21771873 - 21771976
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 100  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| ||||||||||||| |||| |||||||| ||    
T  21771873 atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaataccccaaaattcaagaccgaagatacaaag 21771972  T
Q  101 ggtg 104  Q
    ||||    
T  21771973 ggtg 21771976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 21808404 - 21808181
Alignment:
Q  1 atattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 97  Q
    ||||||||  |||||||| |||||||||||   || || ||||  ||||| ||||| || | ||||| |||| |||||||||||||||||||||||||||    
T  21808404 atattgaatgaatgatggaatcccaaactacccttgaaaaaaagattgtggagctaaaaaattcaaatcaaataccccaaaattcacgaccaaagataca 21808305  T
Q  98 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 197  Q
     |||||| | ||  |||||| |||| |||||| | |||||  |||||||   || |||||||| ||| | ||||||||||||||||  |||  |||||||    
T  21808304 aagggtggctgagtatctcagaaatagaacaaatcttgagaagcattactcacccaagttggtatcaataggtcctatccatcatggaaatataaatctg 21808205  T
Q  198 aagataggagagaagttcaagctt 221  Q
    ||| |||||||||||| |||||||    
T  21808204 aagttaggagagaagtacaagctt 21808181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 21681622 - 21681782
Alignment:
Q  61 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 160  Q
    |||| |||||||||||||||||||||||||||||||| |||||| ||    || |||||||| ||||||  ||| ||| ||||||||  || ||||| ||    
T  21681622 caaatcaaacaccccaaaattcacgaccaaagatacaaagggtgccacggtatgtcaaaaatagaacaaaatttaaggagcattacagccccaagtttgt 21681721  T
Q  161 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 221  Q
    |||| | |||||||||||||||| |||| || |||| ||| |||||||||||| |||||||    
T  21681722 gtcaataggtcctatccatcatggcaatacagatctaaagttaggagagaagtacaagctt 21681782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 21725808 - 21725911
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagag 100  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| | ||||||||||| |||| |||||||| ||    
T  21725808 atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaatatcccaaaattcaagaccgaagatacaaag 21725907  T
Q  101 ggtg 104  Q
    ||||    
T  21725908 ggtg 21725911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 21745532 - 21745651
Alignment:
Q  89 aaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 188  Q
    ||||||||| ||||||  ||| ||||||| |||| |||||| |||||||  |||||||   || |||||||||||||| |||||||||||||||||||||    
T  21745532 aaagatacaaagggtggtagaccatctcataaatagaacaaattttgagaagcattactcacccaagttggtgtcattaggtcctatccatcatgacaat 21745631  T
Q  189 ccaaatctgaagataggaga 208  Q
    |||||||| |||| ||||||    
T  21745632 ccaaatctaaagacaggaga 21745651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 21664007 - 21664230
Alignment:
Q  1 atattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 97  Q
    ||||||||  ||||||||||||||||||||   || || ||||| ||||| ||||| || | |||||||||| |||||||| ||||||||||||||||||    
T  21664007 atattgaaagaatgatggcatcccaaactacccttgaaaaaaaaattgtggagctagaaaattcaaagcaaataccccaaagttcacgaccaaagataca 21664106  T
Q  98 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctg 197  Q
     |||||| || |  |||||| |||  ||| ||  ||||||  | |||||   || |||||  ||||| | |||||||||||||||| |||| || |||||    
T  21664107 aagggtgccacacaatctcagaaacagaaaaaactttgagaagtattactcacccaagttcctgtcaataggtcctatccatcatggcaatacagatctg 21664206  T
Q  198 aagataggagagaagttcaagctt 221  Q
    ||| |||||| ||||| |||||||    
T  21664207 aagttaggagggaagtacaagctt 21664230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 61 - 221
Target Start/End: Original strand, 15713595 - 15713755
Alignment:
Q  61 caaagcaaacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggt 160  Q
    |||||||||||||||||| |||||||||||||||||| |||||| |||   |||||| |||  | | || || |||| ||||||||   || ||||||||    
T  15713595 caaagcaaacaccccaaagttcacgaccaaagatacaaagggtgccaggctatctcagaaaaagtaaaaattatgagatgcattacgcacctaagttggt 15713694  T
Q  161 gtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 221  Q
     ||| | || |||||||||||||||||| ||||||| |||  ||| ||||||| |||||||    
T  15713695 ttcaataggccctatccatcatgacaatacaaatctaaagtcaggggagaagtacaagctt 15713755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 21992082 - 21992272
Alignment:
Q  1 atattgaacaaatgatggcatcccaaacta---ttaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagataca 97  Q
    ||||||||  |||||||||||||||||||    || |||||||| ||||| ||||| || | |||||||||| |||||||||||||||| || |||||||    
T  21992082 atattgaatgaatgatggcatcccaaacttcccttgaagaaaaaattgtggagctagaaaattcaaagcaaataccccaaaattcacgaacacagataca 21992181  T
Q  98 gagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcatttggtcctatccatcatgacaat 188  Q
     |||||| ||||  ||||||||||| ||| |   ||||||  ||| |||   || || ||||||||| | |||||||||||||||| ||||    
T  21992182 aagggtggcagagtatctcaaaaatagaaaagactttgagaagcactactcacccaaattggtgtcaataggtcctatccatcatggcaat 21992272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21741018 - 21741087
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaac 70  Q
    ||||||||  ||||||||||||||||||||||||||||||| ||||| |||||||| ||| |||||||||    
T  21741018 atattgaatgaatgatggcatcccaaactattaaagaaaaaattgtggagctacaaaaattaaagcaaac 21741087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 21623257 - 21623325
Alignment:
Q  153 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 221  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| |||||||||||| |||||||    
T  21623257 aagttggtgtcaataggtcctatccatcatggcaatacaaatctgaagttaggagagaagtacaagctt 21623325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 221
Target Start/End: Original strand, 21764126 - 21764194
Alignment:
Q  153 aagttggtgtcatttggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 221  Q
    |||||| ||||| | |||||||||||||||||||   || |||||||| |||||||||||| |||||||    
T  21764126 aagttgttgtcaataggtcctatccatcatgacagatcagatctgaagttaggagagaagtacaagctt 21764194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 221
Target Start/End: Original strand, 21791990 - 21792143
Alignment:
Q  68 aacaccccaaaattcacgaccaaagatacagagggtgacagatcatctcaaaaatcgaacaagttttgaggtgcattacattccgaagttggtgtcattt 167  Q
    |||||||| || ||||  |||||||||||| |||||| ||||  |||||| |||  ||  || |||||||  ||||||||| || | ||| || ||| |     
T  21791990 aacacccccaagttcaaaaccaaagatacaaagggtggcagagtatctcagaaagagagaaaattttgagaagcattacatcccaaggtttgtatcaata 21792089  T
Q  168 ggtcctatccatcatgacaatccaaatctgaagataggagagaagttcaagctt 221  Q
    ||||| |||||||||| || | || ||||| || |||||||||||| |||||||    
T  21792090 ggtcccatccatcatggcagtacagatctggagttaggagagaagtacaagctt 21792143  T

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Target: scaffold0182 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 2 - 221
Target Start/End: Original strand, 25223 - 25442
Alignment:
Q  2 tattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaacaccccaaaattcacgaccaaagatacagagg 101  Q
    |||||||  |||||||||| |||||||| ||||||||||| ||| | |||||||| ||||||||||||||||||||||||||| ||| |||||||| |||    
T  25223 tattgaatgaatgatggcagcccaaactcttaaagaaaaaattgaggagctacaaaaatcaaagcaaacaccccaaaattcaccacccaagatacaaagg 25322  T
Q  102 gtgacagatcatctcaaaaatcgaacaagttttgagg-tgcattacattccgaagttggtgtcatttggtcctatccatcatgacaatccaaatctgaag 200  Q
    ||| || || | | || |||   | |||  |||||||  | | ||||  || |||||||||||| | |||||||||||||||||||||  ||||||||||    
T  25323 gtggcatattaccgcagaaagataccaa-atttgaggaagtactacaaacccaagttggtgtcaataggtcctatccatcatgacaataaaaatctgaag 25421  T
Q  201 ataggagagaagttcaagctt 221  Q
     |||||||||||| |||||||    
T  25422 ttaggagagaagtacaagctt 25442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 34446 - 34514
Alignment:
Q  1 atattgaacaaatgatggcatcccaaactattaaagaaaaatttgtgcagctacaacaatcaaagcaaa 69  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||||| | |||||| ||||||||||||    
T  34446 atattgaatgaatgatggcatccgaaactattaaagaaaaatttgtggaactacaaaaatcaaagcaaa 34514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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