View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10829A_low_491 (Length: 222)

Name: NF10829A_low_491
Description: NF10829A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10829A_low_491
NF10829A_low_491
[»] chr3 (18 HSPs)
chr3 (22-203)||(41985668-41985852)
chr3 (22-201)||(41980894-41981073)
chr3 (26-98)||(9695616-9695688)
chr3 (22-203)||(9448354-9448535)
chr3 (26-95)||(9646367-9646436)
chr3 (26-95)||(9655360-9655429)
chr3 (22-98)||(9329876-9329952)
chr3 (23-98)||(9407407-9407482)
chr3 (23-98)||(9416614-9416689)
chr3 (22-84)||(9494822-9494884)
chr3 (22-98)||(9343885-9343961)
chr3 (26-90)||(9626488-9626552)
chr3 (50-98)||(9686751-9686799)
chr3 (26-104)||(9756424-9756502)
chr3 (25-98)||(9432939-9433012)
chr3 (25-98)||(9617463-9617536)
chr3 (22-98)||(9336580-9336656)
chr3 (23-95)||(9425614-9425686)
[»] chr8 (2 HSPs)
chr8 (21-203)||(13170579-13170761)
chr8 (22-203)||(44688680-44688861)
[»] chr1 (6 HSPs)
chr1 (116-203)||(18991335-18991422)
chr1 (26-75)||(8814385-8814434)
chr1 (22-80)||(235253-235311)
chr1 (22-80)||(251412-251470)
chr1 (22-73)||(246907-246958)
chr1 (22-75)||(231621-231674)
[»] chr6 (7 HSPs)
chr6 (22-98)||(7041536-7041612)
chr6 (22-80)||(7025796-7025854)
chr6 (22-80)||(7029853-7029911)
chr6 (22-80)||(7046879-7046937)
chr6 (22-80)||(9170857-9170915)
chr6 (22-78)||(9159515-9159571)
chr6 (22-80)||(7012860-7012918)
[»] chr7 (2 HSPs)
chr7 (23-98)||(450111-450186)
chr7 (23-85)||(3695731-3695792)
[»] chr5 (1 HSPs)
chr5 (31-84)||(18571160-18571213)
[»] chr2 (1 HSPs)
chr2 (26-95)||(20694304-20694373)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 3e-87; HSPs: 18)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 41985668 - 41985852
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccaggg 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41985668 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccgggg 41985767  T
Q  122 aaaccaaaacaatgagagtcatatatgtctactagcaacaac---tcacgctcactctctaccaggaatttcatgtcccctccat 203  Q
    ||||||||||||||||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||    
T  41985768 aaaccaaaacaatgagagtcatatatgtctactagcaacaactgatcaccctcactctctaccaggaatttcatgtcccctccat 41985852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 22 - 201
Target Start/End: Original strand, 41980894 - 41981073
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccaggg 121  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| || ||||||||||| || ||||||||||||||||||    
T  41980894 caagaacaaaactctatcccctaaactcgtcaacttgacccatttcttctctttcttagcaagcctaaacacatcaagattgaaaccatcttcaccaggg 41980993  T
Q  122 aaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctcc 201  Q
    || |||| ||||||||||| ||| ||||| |||||||| || |||| |||||||||||||||||||||||  ||||||||    
T  41980994 aacccaacacaatgagagtgataaatgtccactagcaataattcaccctcactctctaccaggaatttcacatcccctcc 41981073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 26 - 98
Target Start/End: Complemental strand, 9695688 - 9695616
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    |||||||| |||||||||||| | | |||||||||||| |||||||||||||||||||| ||||| |||||||    
T  9695688 aacaaaaccctatcccctaaattggtcaacttgacccacttcttctccttctcatcaagcctgaatacatcaa 9695616  T

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Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 203
Target Start/End: Original strand, 9448354 - 9448535
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccaggg 121  Q
    |||||||||||| |||||||||||| | |  ||||| |||||||||||||||||||||| |||  | |||||||||| | ||| | ||||   ||| |||    
T  9448354 caagaacaaaacactatcccctaaagttgttaacttcacccatttcttctccttctcataaagcttaaacacatcaacccttatagcatcaggacccggg 9448453  T
Q  122 aaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 203  Q
    ||  | ||||||  | | ||||| ||||| ||||||||||| || | ||| || || || | |||||| |||||||||||||    
T  9448454 aactcgaaacaaaaacactcataaatgtccactagcaacaagtctccctctctatcaactaagaattttatgtcccctccat 9448535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 9646436 - 9646367
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 95  Q
    |||||||| |||||||||||| ||  |||||| |||||||||||||||||||||| || |||||| ||||    
T  9646436 aacaaaaccctatcccctaaattcatcaacttcacccatttcttctccttctcatgaaatctgaaaacat 9646367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 9655429 - 9655360
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 95  Q
    |||||||| |||||||||||| ||  |||||| |||||||||||||||||||||| || |||||| ||||    
T  9655429 aacaaaaccctatcccctaaattcatcaacttcacccatttcttctccttctcatgaaatctgaaaacat 9655360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 9329876 - 9329952
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    ||||||||||||  |||| |||||| ||||||||||||||||  | ||||| ||||||||||| || ||||||||||    
T  9329876 caagaacaaaaccttatctcctaaattcgccaacttgacccaccttttctctttctcatcaagcctaaacacatcaa 9329952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 9407407 - 9407482
Alignment:
Q  23 aagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    ||||||||||| |||||||||||||||  |||||| |||||| | || | |||||| |||||||| ||||||||||    
T  9407407 aagaacaaaaccctatcccctaaactcatcaacttcacccatcttttattcttctcgtcaagtctaaacacatcaa 9407482  T

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Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Original strand, 9416614 - 9416689
Alignment:
Q  23 aagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    |||||||| || |||||||||||||||| |||||| |||||||| || | |||||| ||||| | |||||||||||    
T  9416614 aagaacaacaccctatcccctaaactcgtcaacttcacccattttttattcttctcgtcaagacagaacacatcaa 9416689  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 9494884 - 9494822
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaag 84  Q
    |||||||||||| |||||||||||||||  ||| || |||||| || ||||||||||||||||    
T  9494884 caagaacaaaaccctatcccctaaactcatcaaattcacccatctcatctccttctcatcaag 9494822  T

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Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 9343885 - 9343961
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    |||||||||||| |||||||||||| | |  ||||| ||||| ||||||||| ||||||||||  | ||||||||||    
T  9343885 caagaacaaaacactatcccctaaagttgttaacttcacccacttcttctccatctcatcaagcttaaacacatcaa 9343961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 9626552 - 9626488
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaa 90  Q
    |||||||| |||||||||||| ||  ||| || |||||||||||||||||||||| || ||||||    
T  9626552 aacaaaaccctatcccctaaattcatcaaattcacccatttcttctccttctcatgaaatctgaa 9626488  T

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Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 9686751 - 9686799
Alignment:
Q  50 gccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    |||||||||||||| |||||||| ||||||||||| ||||| |||||||    
T  9686751 gccaacttgacccacttcttctcgttctcatcaagcctgaatacatcaa 9686799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 9756424 - 9756502
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagcttta 104  Q
    |||||||| |||||||| ||| || |||||||||||||  | ||||| ||||||||||| ||  ||||||||| |||||    
T  9756424 aacaaaaccctatcccccaaattcaccaacttgacccaccttttctctttctcatcaagcctatacacatcaatcttta 9756502  T

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Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 9432939 - 9433012
Alignment:
Q  25 gaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    ||||||||| ||||| |||||| ||   | ||| ||||| ||| |||||||||||||||||||||| |||||||    
T  9432939 gaacaaaaccctatctcctaaattcttgatcttcacccacttcctctccttctcatcaagtctgaaaacatcaa 9433012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 9617536 - 9617463
Alignment:
Q  25 gaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    ||||||||| |||||||||||| |   |||||| |||||||||||||| ||||||| ||  |||||||| ||||    
T  9617536 gaacaaaaccctatcccctaaatttttcaacttcacccatttcttctctttctcatgaaacctgaacacttcaa 9617463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 9336580 - 9336656
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    ||||||||||||  |||| |||||| ||| || |||||||||  | ||||| ||||||||||| || ||||||||||    
T  9336580 caagaacaaaaccttatctcctaaattcgtcagcttgacccaccttttctctttctcatcaagcctaaacacatcaa 9336656  T

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Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 95
Target Start/End: Original strand, 9425614 - 9425686
Alignment:
Q  23 aagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 95  Q
    ||||||||||| |||| || |||||||  |||||| |||||||| || | |||||| |||||||| |||||||    
T  9425614 aagaacaaaaccctattccttaaactcatcaacttcacccattttttattcttctcgtcaagtctaaacacat 9425686  T

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Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 21 - 203
Target Start/End: Complemental strand, 13170761 - 13170579
Alignment:
Q  21 acaagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccagg 120  Q
    ||||||| | || ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  13170761 acaagaaaataattctttcccctaaactcgccaacttgacccatttcttctccttttcatcaagtctgaacacatcaagctttaaaccatattcaccagg 13170662  T
Q  121 gaaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 203  Q
    ||||||  ||| ||||| |||||| ||||| |||||||||||||||| ||| ||||| |||| ||||||||||||||||||||    
T  13170661 gaaaccgtaacgatgagggtcatagatgtccactagcaacaactcaccctcgctctcgaccaagaatttcatgtcccctccat 13170579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 22 - 203
Target Start/End: Complemental strand, 44688861 - 44688680
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaagctttaaaccatcttcaccaggg 121  Q
    ||||||||||| ||||| |||||||||||  ||||| ||||||||||| | ||||||||  ||  ||||||||||||||  || |||||||||||| |||    
T  44688861 caagaacaaaattctattccctaaactcgttaactttacccatttcttatgcttctcattgagcgtgaacacatcaagccgtagaccatcttcacccggg 44688762  T
Q  122 aaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 203  Q
    || ||||||| |||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||||    
T  44688761 aacccaaaaccatgagagtcatagatgtccactagcaacaactcaccttcactctctaccaggaattttatgtcccctccat 44688680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 1e-18; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 116 - 203
Target Start/End: Original strand, 18991335 - 18991422
Alignment:
Q  116 ccagggaaaccaaaacaatgagagtcatatatgtctactagcaacaactcacgctcactctctaccaggaatttcatgtcccctccat 203  Q
    |||||||| ||||||||||| |||||| | ||||| ||||||||||||||||  |||| |||||||| ||||||||| ||||||||||    
T  18991335 ccagggaacccaaaacaatgcgagtcacagatgtccactagcaacaactcaccttcacactctaccaagaatttcatatcccctccat 18991422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 8814434 - 8814385
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctcctt 75  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||    
T  8814434 aacaaaactctatcccctaaattcgccaacttcacccacttcttctcctt 8814385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 235253 - 235311
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    |||||| |||||||||||||||||| | |||||||| ||||| ||||||||||| ||||    
T  235253 caagaagaaaactctatcccctaaatttgccaacttcacccacttcttctccttttcat 235311  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 251470 - 251412
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    ||||||||||||||||||||||| | |||||||||| ||||| ||||| ||||| ||||    
T  251470 caagaacaaaactctatcccctatattcgccaactttacccacttcttttccttttcat 251412  T

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Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 73
Target Start/End: Original strand, 246907 - 246958
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctcc 73  Q
    ||||||||||||| |||| |||||| | |||||||| |||||||||||||||    
T  246907 caagaacaaaactgtatctcctaaattagccaacttcacccatttcttctcc 246958  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 231621 - 231674
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctcctt 75  Q
    ||||||||||||| ||||||||||| | |||||||| ||||| ||| |||||||    
T  231621 caagaacaaaactatatcccctaaattagccaacttcacccacttcatctcctt 231674  T

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Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Original strand, 7041536 - 7041612
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    |||||||||||| |||||||||||||| | |||||| ||||| |||||||||||||||| |||| | |||| |||||    
T  7041536 caagaacaaaaccctatcccctaaactagtcaacttcacccacttcttctccttctcattaagtttaaacaaatcaa 7041612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 7025796 - 7025854
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    |||||||||||| ||||| |||||||||| |||||| ||||| ||||||||||||||||    
T  7025796 caagaacaaaaccctatctcctaaactcgtcaacttcacccacttcttctccttctcat 7025854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 7029853 - 7029911
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    |||||||||||| |||||||| ||||||| |||||| ||||| ||||||||||||||||    
T  7029853 caagaacaaaaccctatccccgaaactcgtcaacttcacccacttcttctccttctcat 7029911  T

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Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 7046879 - 7046937
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    ||||||||||||| |||||||||||||||  ||||| ||||| ||||||||||||||||    
T  7046879 caagaacaaaactttatcccctaaactcgttaacttcacccacttcttctccttctcat 7046937  T

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Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 9170857 - 9170915
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    |||||||||||| ||||||||||||||||  || || ||||| ||||||||||||||||    
T  9170857 caagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctcat 9170915  T

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Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 9159571 - 9159515
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctc 78  Q
    |||||||||||| ||||||||||||||||  || || ||||| ||||||||||||||    
T  9159571 caagaacaaaaccctatcccctaaactcgttaatttcacccacttcttctccttctc 9159515  T

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Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 80
Target Start/End: Original strand, 7012860 - 7012918
Alignment:
Q  22 caagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcat 80  Q
    |||||||||||  ||||| |||||||| | |||||| ||||| ||||||||||||||||    
T  7012860 caagaacaaaatcctatctcctaaacttgtcaacttcacccacttcttctccttctcat 7012918  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 98
Target Start/End: Complemental strand, 450186 - 450111
Alignment:
Q  23 aagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacatcaa 98  Q
    |||||||||| | |||| |||||| ||  |||||||||||| || ||||||||||||||||| || ||||||||||    
T  450186 aagaacaaaattgtatctcctaaattcctcaacttgacccactttttctccttctcatcaagcctaaacacatcaa 450111  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 85
Target Start/End: Original strand, 3695731 - 3695792
Alignment:
Q  23 aagaacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagt 85  Q
    |||||||||||||||||||||||||||  ||||||||  || ||||||| |||||||| ||||    
T  3695731 aagaacaaaactctatcccctaaactctacaacttga-tcacttcttcttcttctcattaagt 3695792  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 18571160 - 18571213
Alignment:
Q  31 aactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaag 84  Q
    |||| ||||||||||||||| ||| || ||||| ||||||||||||||||||||    
T  18571160 aactgtatcccctaaactcgtcaatttcacccacttcttctccttctcatcaag 18571213  T

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Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 20694373 - 20694304
Alignment:
Q  26 aacaaaactctatcccctaaactcgccaacttgacccatttcttctccttctcatcaagtctgaacacat 95  Q
    |||||||| |||||||| ||||| | |||  | ||||||||||||||||| |||||||| ||||||||||    
T  20694373 aacaaaaccctatcccccaaacttgtcaaactcacccatttcttctccttttcatcaagcctgaacacat 20694304  T

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